BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941712 Length=1139 Score E Sequences producing significant alignments: (Bits) Value AT5G22140.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase fam... 1803 0.0 AT3G44190.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase fam... 918 0.0 > AT5G22140.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr5:7340122-7341906 REVERSE LENGTH=1509 Length=1509 Score = 1803 bits (976), Expect = 0.0 Identities = 1086/1139 (95%), Gaps = 7/1139 (1%) Strand=Plus/Plus Query 4 GAGCTTGAATC-GCTAAAAATGGAAGGGATTGAATCTGGTTCTAGACAAGGAAAGAGAGT 62 ||||||||||| | ||||||||||||| ||||||||||| |||| ||||||||||||||| Sbjct 232 GAGCTTGAATCTG-TAAAAATGGAAGGCATTGAATCTGGGTCTAAACAAGGAAAGAGAGT 290 Query 63 GGTGGTGATCGGCGGCGGAATCGCCGGCTCACTCGCCGCGAAATTGCTTCAGTTCGATGC 122 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 291 GGTTGTGATCGGCGGCGGAATCGCCGGCTCACTCGCCGCGAAATTGCTTCAGTTCGATGC 350 Query 123 TGATGTCACACTCATCGATCCGAAGGAGTACTTTGAGATTACATGGGCAAGTTTGAGATC 182 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 351 TGAAGTCACACTCATCGATCCGAAGGAGTATTTTGAGATTACATGGGCAAGTTTGAGATC 410 Query 183 CAAGGTGGAGCCTAAGTTTGCTGAAAGAACAGTGATTAACCACAAGAGTTACTTGAAACA 242 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 411 CATGGTGGAGCCTAAGTTTGCTGAGAGAACAGTGATTAACCACAAGAGTTACTTGAAACA 470 Query 243 AGGTCGTGTTGTAACTTCTCCGGCGATCAATATCACAGAGACTGATGTTATGACTGAAGA 302 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 471 AGGCCGTCTTGTAACTTCTCCGGCGATCAATATCACAGAGAGTGATGTTATGACTGAAGA 530 Query 303 TGGATCTGTGATTGGATATGATTATCTTGTTATTGCTACAGGTCACAATGACTTGTTCCC 362 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 531 TGGATCTGTGATTGGATATGATTATCTTGTGATTGCTACAGGTCACAATGACTTGTTCCC 590 Query 363 TAAAACTAGACAAGAGAAGCTGTCACATTACCAAGCTGAATATGAGAAGATCAAATCTTC 422 |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct 591 TAAAACTAGACAAGAGAAGCTGTCACATTATCAATCTGAATATGAGAAGATAAAATCTTC 650 Query 423 TGGATCAGTTTTGATTGTTGGTGGAGGTCCATCTGGTGTGGAGCTTGCTGCGGAAATCGC 482 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 651 TGGATCAGTTTTGATTGTTGGTGGAGGTCCATCTGGTGTGGAGCTAGCTGCGGAAATCGC 710 Query 483 GGTTGATTTTCCGGAGAAGAAGGTTACTCTGGTGCATAAAGGACCAAGATTGCTTGAATT 542 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 711 GGTTGATTTCCCGGAGAAGAAGGTTACTCTGGTGCATAAAGGACCAAGATTGCTTGAGTT 770 Query 543 TGTTGGACAAAAAGCTGCTGATAAAGCATCTGACTGGTTAGAATCAAAGAAAGTGGAAGT 602 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 771 TGTTGGACAAAAAGCTGCTGATAAAGCATCTGATTGGTTAGAATCAAAGAAAGTGGAAGT 830 Query 603 GATATTGAATCAATCTGTGGATTTGAGTTCAGCTTCAGATGGAAACAAAACATACCGGAC 662 |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 831 TATATTGAACCAATCTGTGGATTTGAGTTCAGCTTCGGATGGAAACAAAATATACCGGAC 890 Query 663 TTCAGGAGGAGAAACTATACATGCAGAT-TGTCATTTCCTCTGTGTTGGGAAACCTTTGT 721 ||||||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||| Sbjct 891 TTCAGGAGGAGAAACTATACACGCAGATAT-TCACTTCCTCTGTGTTGGGAAACCTTTGT 949 Query 722 CTTCTCAATGGCTCAATGGAACTGTTCTGAAAGATAGCTTGGATGGTAAAGGAAGGGTTA 781 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 950 CTTCTCAATGGCTCAATGGAACTGTTCTGAAAGATAGCTTGGATGGTAAAGGAAGAGTCA 1009 Query 782 TGGTCGATGAGTACTTGCGAATTAGGGGTCGAAGCAATGTATTCGCCATTGGAGATATCA 841 ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct 1010 TGGTCGATGAGTACTTGCGGATTAGAGGTCGAAGCAATGTATTCGCTGTTGGAGATATCA 1069 Query 842 CTAATATCCCGGAGATGAAACAAGGATATATAGCGGAGACTCATGCTAATGTGGTTGTGA 901 |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 1070 CTAATATCCCTGAGATGAAACAAGGATATATAGCAGAGACTCATGCTAATGTCGTTGTGA 1129 Query 902 AAAACATAAAGGTAATGATGTCGAGC-GGTAAAAAGAAGAAGATGTCGACTTACAAGCCT 960 | |||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct 1130 AGAACATAAAGGTAATGATGTC-AGGTGGGAAAAAGAAGAAGATGTCGACTTACAAGCCC 1188 Query 961 GGTCCAGAGATGGCCATTGTATCTTTAGGAAGAAAGGACTCGGTGGCTCAGTTTCCGTTT 1020 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1189 GGTCCAGAGTTGGCCATTGTATCTTTAGGAAGAAAGGACTCGGTGGCTCAGTTTCCGTTT 1248 Query 1021 GTAACAGTTGTTGGTTGCCTCCCTGGTTTGATCAAGTCAAAGGATCTGTTTGTGGGAAAG 1080 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1249 GTGACAGTTGTTGGTTGCCTCCCTGGTTTGATCAAGTCTAAGGATCTGTTTGTGGGGAAG 1308 Query 1081 ACGAGGAAGGCAAGAGGACTAAATCCTAAACTTGTATAAGGTTGAGTCCTATTTGTGTT 1139 || |||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||| Sbjct 1309 ACAAGGAAGGCAAGAGGCCTAAATCCTAAACTTGTATAAGTTTGATTCCTATT-GTGTT 1366 > AT3G44190.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr3:15901797-15903608 REVERSE LENGTH=1517 Length=1517 Score = 918 bits (497), Expect = 0.0 Identities = 892/1080 (83%), Gaps = 38/1080 (4%) Strand=Plus/Plus Query 55 AAGAGAGTGGTGGTGATCGGCGGCGGAATCGCCGGCTCACTCGCCGCGAAATTGCTTCAG 114 ||||||||| | || ||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct 240 AAGAGAGTGATTGTTATCGGCGGCGGAATCGCCGGCTCTCTCGCTTCGAAATTTCTTCAA 299 Query 115 TTCGATGCTGATGTCACACTCATCGATCCGAAGGAGTACTTTGAGATTACATGGGCAAGT 174 |||||| | ||| |||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct 300 TTCGATTCCGATCTCACCCTCATTGATCCGAAGGAGTATTTTGAGATTATTTGGGCAAGT 359 Query 175 TTGAGATCCAA-GGTGGAGCCTAAG--TTTGCTGAAAGAACAGTGATTAACCACAAG-AG 230 || || | ||| ||| ||||| || |||||||||||| | ||||| ||||||||| || Sbjct 360 TTAAGGT-CAATGGTAGAGCC--AGCTTTTGCTGAAAGATCGGTGATAAACCACAAGAAG 416 Query 231 TTACTTGA-AACAA-GGTCGTGTTGTAACTTCTCCGGCGATCAATATCACAGAGACTGAT 288 || || | || || ||||||||||| |||||||| ||| | ||||||||||| || ||| Sbjct 417 -TA-TTTACAA-AATGGTCGTGTTGTGACTTCTCCAGCGGTTAATATCACAGACACCGAT 473 Query 289 GTTATGACTGAAGATGGATC-TGTGATTGGATATGATTATCTTGTTATTGCTACAGGTCA 347 ||| |||| | ||||| || ||| |||| ||||||||||||||||||||||| ||||| Sbjct 474 GTTTTGACCGCGGATGG-TCTTGTCTTTGGGTATGATTATCTTGTTATTGCTACTGGTCA 532 Query 348 CAATGACT-TG-TTCCCTAAAACTAGACAAGAGAAGCTGTCACATTACCAAGCTGAATAT 405 |||||| | || || ||||||||||| ||||||||| | || || |||||| | ||| || Sbjct 533 CAATGA-TGTGCTT-CCTAAAACTAGGCAAGAGAAGTTATCTCAATACCAAACAGAACAT 590 Query 406 GAGAAGATCAAATCTTCTGGA-TCAG-TTTTGATTGTTGGTGGAGGTCCATCTGGTGTGG 463 ||||||||||| || ||| || || | || ||||||||||||||||||| || ||||||| Sbjct 591 GAGAAGATCAAGTCATCT-GAGTC-GATTCTGATTGTTGGTGGAGGTCCGTCGGGTGTGG 648 Query 464 AGCTTGCTGCGGAAATCGCGGTTGATTTTCCGGAGAAGAAGGTTACTCTGGTGCATAAAG 523 |||| |||||||| || || || ||||| || ||||| ||||||||| | || || || | Sbjct 649 AGCTCGCTGCGGAGATAGCTGTCGATTTCCCTGAGAAAAAGGTTACTATAGTACACAATG 708 Query 524 GACCAAGATTGCTTGAATTTGTTGGACAAAAAGCTGCTGATAAAGCATCT-GACTGGTTA 582 |||| |||||||| ||||||||||| || |||||||| || || |||| | |||||| | Sbjct 709 GACCGAGATTGCTGGAATTTGTTGGTCAGAAAGCTGCAGACAAGGCAT-TAGACTGGAT- 766 Query 583 GAA-TCAAAGAAAGTGGAAGTGATATTGAATCAATCTGTGGATTTGAGTTCAGCTTCAGA 641 ||| || |||| ||| |||||||||||||| ||| || |||||||||||||||||||| Sbjct 767 GAAGTCCAAGAGAGTTGAAGTGATATTGAACCAAAGGGTTGATTTGAGTTCAGCTTCAGA 826 Query 642 TGGAAACAAAACATACCGGACTTCAGGAGGAGAAACTATACATGCAGATTGTCATTTCCT 701 ||| | ||||| ||||| || || || ||||| || ||||| || |||||||| ||||| Sbjct 827 TGGGAGTAAAACGTACCGAACATCGGGTGGAGAGACGATACACGCGGATTGTCACTTCCT 886 Query 702 CTGTGTTGGGAAACCTTTGTCTTCTCAATGGCTCAATGGAACTGTTCTGAAAGATAGCTT 761 |||| ||| |||||||||||||| ||||||| || ||||||||||||||||||| ||| Sbjct 887 CTGTACTGGAAAACCTTTGTCTTCAGAATGGCTAAAAGGAACTGTTCTGAAAGATAACTT 946 Query 762 GGATGGTAAAGGAAGGGTTATGGTCGATGAGTACTTGCGAATTAGGGGTCG-AAGCAATG 820 |||||| ||||||||| |||||||||||||||||||| || ||| |||||| ||| |||| Sbjct 947 GGATGGCAAAGGAAGGCTTATGGTCGATGAGTACTTGAGAGTTAAGGGTCGCAAG-AATG 1005 Query 821 TATTCGCCATTGGAGATATCACTAATATCCCGGAGATGAAACAAGGATATATAGCGGAGA 880 ||||||| ||||| ||||| ||| || ||||||||||||||||||| || || || |||| Sbjct 1006 TATTCGCTATTGGTGATATTACTGATGTCCCGGAGATGAAACAAGGCTACATTGCTGAGA 1065 Query 881 CTCATG-CTAATGTGGTTGTGAAA-AACATAAAGGTAATGATGTC-GAGCGGTAAAAAGA 937 || | || ||| | | ||| ||||||||| | ||||||| | | || || ||| Sbjct 1066 AACACGCCT-CTGTAGCT-ACAAAGAACATAAAGTTGTTGATGTCTG-GTGGGAACGAGA 1122 Query 938 AGAAGATGTCGACTTACAAGCCTGGTCCAGAGATGGCCATTGTATCTTTAGGAAGAAAGG 997 |||||||||||||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct 1123 AGAAGATGTCGACTTACAAGCCTGGTCCGGACATTGCCATAATATCTTTAGGAAGAAAGG 1182 Query 998 ACTCGGTGGCTCAGTTTCCGTTTGTAACAGTTGTTGG-TTGCCTCCCTGGTTTGATCAAG 1056 ||||||| |||||||| || || | ||||| | || |||| | |||||||||||||| Sbjct 1183 ACTCGGTTGCTCAGTTCCCATTCATGACAGTC-TCGGGTTGCATACCTGGTTTGATCAAA 1241 Query 1057 TCAAAGGATCTGTTTGT-GGGAAAGACGAGGAAGGCAAGAGGACTAAATCCTAAACTTGT 1115 || |||||||||||||| ||||| |||||||||||||||||| || ||||||| ||||| Sbjct 1242 TCTAAGGATCTGTTTGTCGGGAA-GACGAGGAAGGCAAGAGGTCTGGATCCTAACCTTGT 1300 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55873206585 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5