BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941755 Length=1522 Score E Sequences producing significant alignments: (Bits) Value AT5G22500.1 | Symbols: FAR1 | fatty acid reductase 1 | chr5:747... 2355 0.0 AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 | chr3:161... 837 0.0 > AT5G22500.1 | Symbols: FAR1 | fatty acid reductase 1 | chr5:7470443-7474120 FORWARD LENGTH=1778 Length=1778 Score = 2355 bits (1275), Expect = 0.0 Identities = 1441/1523 (95%), Gaps = 4/1523 (0%) Strand=Plus/Plus Query 1 TTGGTTGAGAATAATTTTGTTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAAG 60 |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 75 TTGGTTGAGAATCATTTCATTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAAG 134 Query 61 ACCATTCTCATCACTGGGGCACCTGGTTTTCTTGCCAAGGTTTTGGTAGAGAAAATTCTA 120 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||| Sbjct 135 ACCATTCTCATCACAGGAGCTCCTGGTTTTCTTGCCAAGGTTTTGGTAGAGAAAATACTA 194 Query 121 AGGTTGCAACCAAATGTGAAGAAGATGTACCTTCTGTTGAGAGCTCCCGACGAAAAATCA 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 195 AGGTTGCAACCAAATGTGAAGAAGATATACCTTCTGTTGAGAGCTCCCGACGAAAAATCA 254 Query 181 GCCATGCAACGCTTATATACTGAGGTTATAGAGATAGACCTCTTTAAAGTGTTGAGGAAC 240 |||||||||||| || || ||||||||| ||||| ||||| |||||||||||||||||| Sbjct 255 GCCATGCAACGCCTACGTAGTGAGGTTATGGAGATCGACCTTTTTAAAGTGTTGAGGAAC 314 Query 241 GATCTAGGTGAAGAGAACTTGAATGCCTTGGTGCGGaaaaaaaTTGTACCGGTTCCAGGT 300 ||||||| ||||| || |||||||||||| ||||| |||||||||| |||||||||||| Sbjct 315 AATCTAGGAGAAGACAATTTGAATGCCTTGATGCGGGAAAAAATTGTGCCGGTTCCAGGT 374 Query 301 GATATATCGATCGATAATTTGGGACTGAAAGACACCGATCTCATACAACGTTTGTGGAGT 360 |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| Sbjct 375 GATATATCGATCGATAATTTGGGATTGAAAGACACTGATCTCATACAACGTATGTGGAGT 434 Query 361 GAGATTGATATCATAATCAACATTGCTGCCACGACAAATTTCGATGAAAGATATGATATT 420 ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct 435 GAGATTGATATCATAATCAACATAGCAGCCACAACAAATTTCGATGAAAGATATGATATT 494 Query 421 GGTCTTGGGATCAATACATTTGGAGCCCTTAATGTTCTCAACTTCGCCAAAAAGTGCGTT 480 |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 495 GGTCTTGGCATCAACACATTTGGAGCCCTGAATGTTCTCAACTTCGCCAAAAAGTGTGTT 554 Query 481 AAAGGACAATTGCTTCTCCATGTCTCGACCGCGTATGTAAGCGGAGAACAATCC-GGGTT 539 |||||||||||||||||||||||||| ||||||||| ||||||| |||||| || || || Sbjct 555 AAAGGACAATTGCTTCTCCATGTCTCAACCGCGTATATAAGCGGTGAACAA-CCTGGATT 613 Query 540 ATTACTAGAGAAACCATTCAAGATGGGGGAGACTCTCAGCGAAAAGCGGAAACTAGACAT 599 |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct 614 GTTACTAGAGAAACCATTCAAGATGGGGGAGACTCTCAGCGGGGATCGGGAACTAGACAT 673 Query 600 CAATATAGAACGTGAACTAATGAAACAGAAATTGAAAGAGCTTCAAGATTGTTCTGAAGA 659 ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| || Sbjct 674 CAATATAGAACATGATCTAATGAAACAAAAATTGAAAGAGCTTCAAGATTGTTCTGATGA 733 Query 660 AGAGATCTCACAAACAATGAAAGATTTTGGAATGGCAAGGGCAAAGCTTCATGGATGGCC 719 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 734 AGAGATCTCGCAAACAATGAAAGATTTTGGAATGGCAAGGGCAAAGCTTCATGGATGGCC 793 Query 720 AAATACATATGTATTCACCAAAGCAATGGGAGAGATGCTAATGGGAAAATATAGAGAAAA 779 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 794 AAATACATATGTATTCACCAAAGCAATGGGAGAGATGCTAATGGGAAAATACAGAGAAAA 853 Query 780 TTTGCCACTTGTTATCATACGTCCAACAATGATTACTAGTACTCTTGCCGAACCATTCCC 839 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 854 TTTGCCACTTGTTATCATACGTCCAACAATGATTACTAGTACTATTGCCGAACCATTCCC 913 Query 840 CGGTTGGATTGAAGGGTTGAAAACATTAGATAGTGTGATTGTTGCATATGGTAAAGGAAG 899 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 914 CGGTTGGATTGAAGGGTTGAAAACATTAGACAGTGTGATTGTTGCATATGGTAAAGGAAG 973 Query 900 GCTTAAATGTTTTCTTGCGGATTCAAACTCAGTTTTTGACCTTATACCGGCAGACATGGT 959 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 974 GCTTAAATGTTTTCTTGCGGATTCAAACTCAGTCTTTGACCTTATACCGGCAGACATGGT 1033 Query 960 GGTAAATGCGATGATTGCAGCCGCAACAGCTCATTGGGGAGATACCGGGATTCAGGCAAT 1019 |||||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct 1034 AGTAAATGCGATGGTTGCAGCCGCGACAGCTCATTCGGGAGACACCGGGATTCAGGCAAT 1093 Query 1020 ATATCATGTCGGTTCTTCTTGTAAGAATCCGGTCACGTTTGGACAACTTCACGATATCAC 1079 ||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1094 ATATCATGTTGGTTCGTCTTGTAAGAATCCAGTCACGTTTGGACAACTTCACGATTTCAC 1153 Query 1080 GGCTCGTTACTTTGCTAAACGTCCTCTGGTTGGTCGGAATGGCTCGCCAATCATAGTGAC 1139 |||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 1154 GGCTCGTTACTTCGCTAAACGTCCTTTGATTGGTCGGAATGGCTCGCCAATCATAGTGGT 1213 Query 1140 CAAAGGAACCATTTTGTCCACTATGGCTCAATTCAGCCTCTACATGACCCTTCGTTACAA 1199 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1214 CAAAGGAACCATTCTGTCCACTATGGCTCAATTCAGCCTCTACATGACCCTTCGTTACAA 1273 Query 1200 GCTTCCTTTACAGATACTTCGATTGATAAATATAGTTTATCCATGGAGTCACGGAGATAA 1259 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1274 GCTTCCTCTACAGATACTTCGATTGATCAATATAGTTTATCCATGGAGTCACGGAGATAA 1333 Query 1260 CTACAATGACCTCAGCCGAAAAATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAGCC 1319 ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1334 CTACAGTGACCTAAGCCGCAAAATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAGCC 1393 Query 1320 TTACTTACTCTTCCAGGGCATATTTGATGATTTAAATACGGAAAGACTGCGAATGAAAAG 1379 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1394 TTACTTACTCTTCAAGGGCATATTTGATGATTTAAATACCGAAAGACTGCGAATGAAAAG 1453 Query 1380 AAAGGAGAATATCAAAGAGTTAGATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTG 1439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1454 AAAGGAGAATATCAAAGAGTTAGATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTG 1513 Query 1440 GGACAATTATATCACAAACACACACATTCCTGGCCTCATCACCTATGTGCTTAAACAATA 1499 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 1514 GGACAATTATATCACAAACACCCACATTCCTGGCCTCATCACCCATGTGCTTAAACAATA 1573 Query 1500 AATTATATACTACTAATATGTTT 1522 |||||| || |||||||||| Sbjct 1574 AATTATG--CTGGTAATATGTTT 1594 > AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 | chr3:16124021-16127954 FORWARD LENGTH=1725 Length=1725 Score = 837 bits (453), Expect = 0.0 Identities = 1197/1547 (77%), Gaps = 87/1547 (6%) Strand=Plus/Plus Query 1 TTGGTTGAGA-ATAATTTTGTTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAA 59 |||| | ||| |||| ||| ||||||||| |||||||| |||| || ||| | |||| Sbjct 36 TTGGAT-AGATATAAGTTT-CTTCAATGGACTCCAATTGCATTCAGTTCCTCCATGACAA 93 Query 60 GACCATTCTCATCACTGGGGCACCTGGTTTTCTTGCCAAGGT-TTTGGTAGAGAAAAT-T 117 ||| |||||| |||| || | || ||||| || ||||| || ||| || |||||||| | Sbjct 94 GACGATTCTCGTCACCGGTGTTCCCGGTTTCCTCGCCAAAGTGTTT-GTGGAGAAAATAT 152 Query 118 CTAAGG-TTGCAACCAAATGTGAAGAAGATGTACCTTCTGTTGAGAGCTCCCGACGAA-A 175 | ||| || |||||||| || |||||| | | |||||| |||||||| | ||| || Sbjct 153 -TGAGGATT-CAACCAAAGGTAAAGAAGCTTTTCCTTCTTTTGAGAGCAGCAGAC-AATG 209 Query 176 AATCAGCCATGCAACGCTTAT-ATACTGAGGTTATAGAGATAGACCTCTTTAAAGTGTTG 234 |||||||||||||||| || | | | ||||||| | |||| ||| || |||| ||||||| Sbjct 210 AATCAGCCATGCAACGGTT-TCACAGTGAGGTTTTGGAGAAAGATCTTTTTAGAGTGTTG 268 Query 235 AGGAACGATCTAGGTGAAGAGAACT-TGAATGCCTTGGT-GCGGaaaaaaaTTGTACCGG 292 | |||| | ||||||| ||||| | |||| || || | | | ||||| | ||||| Sbjct 269 AAAAACGCTTTAGGTGATGAGAA-TCTGAAAGCTTTCATAACAG-AAAAAGTCGTACCTA 326 Query 293 TTCCAGGTGATATAT-CGATCGATAATTTGGGACTGAAAGACACCGATCTCATACAACGT 351 |||| |||||||||| || | |||||||||||| |||| | | |||||| |||||| | Sbjct 327 TTCCCGGTGATATATCCG-TTGATAATTTGGGAGTGAAGGGTTCTGATCTCTTACAACAT 385 Query 352 TTGTGGAGTGAGATTGATATCATAATCAACATTGCTGCCACGAC-AAATTTCGATGAAAG 410 |||||| ||||||||||||||| |||| | || ||||| || || ||| |||||||| Sbjct 386 ATGTGGAATGAGATTGATATCATTGTCAATGTAGCCGCCACAACGAACTTT-GATGAAAG 444 Query 411 ATATGATATTGGTCTT-GGGATCAATACATTTGGAGCC-CTTAATGTTCTCAACTTCGCC 468 ||||||| |||||||| | | |||| ||||||||| || || ||||| |||||||| ||| Sbjct 445 ATATGATGTTGGTCTTAGCG-TCAACACATTTGGA-CCGCTCAATGTCCTCAACTTTGCC 502 Query 469 AAAAAGTGCGTTAAAGGACAATTGCTTCTCCATGTCTCGACCGCGTATGTAAGCGGAGAA 528 || ||||| ||||||||||| |||||||| ||||| || ||||||||||| |||||| | Sbjct 503 AAGAAGTGTGTTAAAGGACAGTTGCTTCTTCATGTTTCAACCGCGTATGTGCGCGGAG-A 561 Query 529 CAA-TCCGG-GTTATTACTA-GAGAAACCA-TTCAAGATGGGGGAGAC-TCTCAGCGAAA 583 || || || || |||| | |||||| || ||| | ||||||||||| | | | || | Sbjct 562 GAAGTCTGGACTT-TTAC-ATGAGAAAACATTTC-ACATGGGGGAGACAT-TGAACGGAC 617 Query 584 AGCGGAAACTAGACATCAATATAG-AACGTGAACTAATGAAACAGAAATTGAAAGAGCT- 641 | | ||| ||| ||| | | | || | || ||||||||||| ||| |||||||||| Sbjct 618 ATAGAAAATTAGTCATTGAGACCGAAATG-GAGCTAATGAAACAAAAACTGAAAGAGCTA 676 Query 642 -----TCAAGATTGTTCTGAAGAAGAGATCTCACAAACAATGAAAGATTTTGGAATGGCA 696 ||| ||||||| ||||||||||| ||||| | ||||||||| |||||||| || Sbjct 677 CAGAAACAAAATTGTTCAGAAGAAGAGATTTCACAGTCTATGAAAGATCTTGGAATGTCA 736 Query 697 AGGGCAAAGCTTCATGGATGGCCAAATACATATGTATTCACCAAAGCAATGGGAGAGATG 756 |||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||| Sbjct 737 AGGGCAAAGCTTCATGGATGGCCAAACACATATGTGTTTACCAAATCAATGGGAGAGATG 796 Query 757 CTAATGGGAAAATATAGAGAAAAT-TTGCCACTTGTTATCATACGTCCAACAATGATTAC 815 || | || || ||||||||||| || ||| | |||||||| ||||| |||||||| || Sbjct 797 CTTCTTGGTAATTATAGAGAAAACCTTCCCA-TCGTTATCATCCGTCCCACAATGATCAC 855 Query 816 TAGTACTCTTGCCGAACCATTCCCCGGTTGGATTGAAGGGTTGAA-AAC-ATTAGATAGT 873 ||| ||| || | |||||||| ||||||||||| |||||||| || ||| || ||| ||| Sbjct 856 TAGCACTTTTTCAGAACCATTTCCCGGTTGGATCGAAGGGTT-AAGAACCAT-AGACAGT 913 Query 874 GTGATTGTTGCATATGGTAAAGGAAGGCTTAAATGTTTTCTTGCGGATTCAAACTCAGTT 933 ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 914 GTGATTGTTGCATATGGCAAAGGAAGGCTTAAATGTTTTCTTGCAGATCCAAACTCAGTC 973 Query 934 TTTGACCTTATACCGGCAGACATGGTGGTAAATGCGATGATTGCAGC--CG-CAA--CAG 988 |||| |||||||| | |||||||| | ||| || ||| | | || || ||| || Sbjct 974 CTTGATCTTATACCTGTGGACATGGTCGCAAACGCAATGGTCACGGCTGCGGCAATACA- 1032 Query 989 CTCATTGGGGAGATACCGGGATTC--AGGCAATATATCATGTCGGTTCTTCTTGTAAGAA 1046 | || ||| || || || ||| || | | || |||||||| || |||||||| || Sbjct 1033 CGCA--GGGAAGCTA--GG--TTCCCAGACCGTGTACCATGTCGGATCATCTTGTAAAAA 1086 Query 1047 TCCGGTCACGTTTGGACA-ACTTCACGATATCACGGCTCGTTACTTTGCTAAACGTCCTC 1105 ||| |||| || | ||| | |||| ||| || ||||| | ||||| | ||| |||| Sbjct 1087 CCCGATCACATTCGAACAGA-TTCATGATCTCGCGGCTAGCTACTTCACGAAAAACCCTC 1145 Query 1106 TGGTTGGTCG-GAATGGCTCGCCAAT-CATAGTGACCAAAGGAACCATTTTGTCCACTAT 1163 | ||| | || || ||| || | || | |||| |||||||||| || |||||||| || Sbjct 1146 TTGTTAGACGCGA-TGGTTCATCTATAC-TAGTCTCCAAAGGAACTATCTTGTCCACAAT 1203 Query 1164 GGCTCAATTCAGCCTCTACATGACCCTTCGTTACAAGCTTCCTTTACAGATACTT-CGAT 1222 |||||| ||||| ||||||||||||||||||||||||| ||||| ||||| || |||| Sbjct 1204 GGCTCAGTTCAGTTTCTACATGACCCTTCGTTACAAGCTACCTTTGCAGATG-TTGCGAT 1262 Query 1223 TGATAAATATAGTTTATCCATGGAGTCACGG-AGATAACTACAATGACCTC-AGCCGAAA 1280 ||||| || || ||||||| ||| | | || | |||| || || ||| | | ||| || Sbjct 1263 TGATATATGTAATTTATCCTTGGTGGAATGGTA-ATAAATATAAAGACATTGA-CCGCAA 1320 Query 1281 AATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAG-CCTTACT-TACTC-TTCCAGGG 1337 || ||||| || ||||| | || || || ||| || ||||| | | || || |||| Sbjct 1321 GATTAAGCTGGCGATGCGGTTGGTCGACCTCTAC-AGACCTTA-TGT-CTTGTTTAAGGG 1377 Query 1338 CATATTTGATGATTTAAATACGGA-AAGACTGCGAATGAAAAGAAAGGAGAATA-TCAAA 1395 ||||||||| ||| ||||| || || |||||| ||||||||||||||| || | ||| Sbjct 1378 CATATTTGACGATACGAATACTGAGAA-ACTGCGGTTGAAAAGAAAGGAGATTAAT-AAA 1435 Query 1396 GAGTTAG-ATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTGGGACAATTATATCAC 1454 || | | |||| | ||| || || ||||| ||||| ||||||||||| ||||||| || Sbjct 1436 GAAAT-GTATGGTTTGTTTGAATTTGATCCAAAGTCTATTGATTGGGAGGATTATATGAC 1494 Query 1455 AAACACACACATTCCTGGCCTCATCACCTATGTGCTTAAACAATAAA 1501 | || || ||||| ||||||||||||||||| || ||| |||||| Sbjct 1495 GACCATTCATATTCCCGGCCTCATCACCTATGTACTCAAAAAATAAA 1541 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75100015320 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5