BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941757 Length=445 Score E Sequences producing significant alignments: (Bits) Value AT5G22530.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 484 2e-136 AT5G22520.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 108 6e-23 > AT5G22530.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7480527-7481194 FORWARD LENGTH=668 Length=668 Score = 484 bits (262), Expect = 2e-136 Identities = 393/451 (87%), Gaps = 29/451 (6%) Strand=Plus/Plus Query 9 ccccccAGAAAAATGTCTAGAGGATGTCTAAGTTGTTTCAAAGTCATGTGTTTCGAGAAG 68 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 86 CCCCCAAGAAAAATGTCTACAGGATGTCTAAGTTGTTTCAAAGTCATGTGTTTCAAGAAG 145 Query 69 AAGCAGAACAAGAAAGAAGAC-AAACCCGTGAAAACAGAAAGATTGCCAGAGCCAGTT-- 125 ||||||| ||||||||||| | |||||||| |||||||| | |||||||||||||||| Sbjct 146 AAGCAGAGCAAGAAAGAAG-CTAAACCCGTAAAAACAGAGATATTGCCAGAGCCAGTTGG 204 Query 126 ----------GA---AG--A-AAAAGAAGGTATACAAGACAAACCTCTGA-AAGCAGAGA 168 || || | ||||||||||||||||| ||||||||||| || ||||| Sbjct 205 AGAAAAAGAAGATGTAGAAAGAAAAGAAGGTATACAAGCCAAACCTCTGAGAA-CAGAG- 262 Query 169 GG-TTGCCAGAGCCGGTTGaaaaaaaaaaGAAAGATGTTAAATACGGCGCGTGCAAGAAG 227 || |||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||| Sbjct 263 GGATTGCCAGAGCCGGTAGAAAAGAAAAAGAAAGATGTAAAATACAGCGCGTGCAAGAAG 322 Query 228 ATGCCCGAGGAATGCATGTTCAAACCCAAACCAGAATGGATCAAG--TATA-GCAGCAGC 284 ||||||||| |||||||||||||||||||||||||||||||| | | || |||||| | Sbjct 323 ATGCCCGAGAAATGCATGTTCAAACCCAAACCAGAATGGATCTCGCATGTAGGCAGCAAC 382 Query 285 GATATTGGACCAAACGTCTACGATTTGTATGGAGATCAATACGCAGAAACAGATGTA-TC 343 ||| |||||||||| ||| |||||| ||||||||||| |||||||||||||||| | || Sbjct 383 GATGTTGGACCAAAAGTCGGCGATTTTTATGGAGATCACTACGCAGAAACAGATG-ACTC 441 Query 344 TTCTACGTCAATGAATAATGAATTCAACAAAGTGAAGACCTTTGATATACGAGGAGTCAA 403 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 TTCTTCGTCAATGACTAATGAATTCAACAAAGTGAAGACCTTTGATATACGAGGAGTCAA 501 Query 404 AGTAGCCACGGCCAAGGAATAAGAGAAGAGG 434 | ||||||| || ||||||||||||||||| Sbjct 502 ACTAGCCACATCCTAGGAATAAGAGAAGAGG 532 > AT5G22520.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22530.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:7478930-7479527 FORWARD LENGTH=598 Length=598 Score = 108 bits (58), Expect = 6e-23 Identities = 91/106 (86%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 334 CAGATGT-ATCTTCTACGTCAATGAATAATGAATTCAACAAAGTGAAGACCTTTGATATA 392 ||||||| || |||| | ||| |||||||||| ||||||||||||||||||||||||||| Sbjct 312 CAGATGTCAT-TTCTTCATCAGTGAATAATGATTTCAACAAAGTGAAGACCTTTGATATA 370 Query 393 CGAGGAGTCAAAGTAGCCACGGCCAAG-GAATA---AGAGAAGAGG 434 |||||||||| || || | |||||||| ||| | |||||||||| Sbjct 371 CGAGGAGTCACAGAAGTCGCGGCCAAGTGAAGATTTAGAGAAGAGG 416 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21162722329 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5