BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941759 Length=364 Score E Sequences producing significant alignments: (Bits) Value AT5G22545.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 444 3e-124 AT5G22520.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 84.2 8e-16 > AT5G22545.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7483253-7483811 FORWARD LENGTH=559 Length=559 Score = 444 bits (240), Expect = 3e-124 Identities = 327/367 (89%), Gaps = 13/367 (4%) Strand=Plus/Plus Query 10 AAAATC-TGAAAATGTCTAAAGGATGTCCAAGTTGTCTCAACATCATATGTTTGAG---G 65 |||||| |||||||| || ||||||||||||||||||||||||||| |||||||| | Sbjct 42 AAAATCAAGAAAATGTGTAGAGGATGTCCAAGTTGTCTCAACATCATGTGTTTGAGAAAG 101 Query 66 AAG-A--AGCAG----AG--GAAGGAGCAGAGTAAGAAACAACAGAAACCTGGGAAAACA 116 ||| | || || || |||||||||||||||||||||||| | ||||| ||||||| Sbjct 102 AAGCAGCAGAAGAATAAGAAGAAGGAGCAGAGTAAGAAACAACACACACCTGTGAAAACA 161 Query 117 GAGGATGTGGTTGAGCCAGTAGGAGTAAGAGATGATGAAGAACAAAGCCTGGAAAAGAAG 176 |||||| ||||||||||| ||||| ||| ||||||||||||| |||||||||| |||||| Sbjct 162 GAGGATATGGTTGAGCCACTAGGAATAAAAGATGATGAAGAAGAAAGCCTGGACAAGAAG 221 Query 177 ACGAACATCACGGGAACAATGGGATATTTTCGACCTGAATATATGTCTAGTTATGACAAT 236 | ||||||||||||||||||||||||| | || |||||||||||||||| | |||||| | Sbjct 222 ATGAACATCACGGGAACAATGGGATATGTCCGGCCTGAATATATGTCTACTAATGACAGT 281 Query 237 TTTTATGGAAAACTTGGGGAAGGTGATTCTTCTTCATCCTTGAAAAATGATTTCAACAAA 296 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 TTTTATCGAAAACTTGGGGAAGGTGATTCTTCTTCATCCTTGAAAAATGATTTCAACAAA 341 Query 297 GTGAAGACCTTTGATTTACGAGGAGTGGCAAAAACAGAGAAGAAGTAAGGAAGAAGATGG 356 ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| ||| Sbjct 342 GTGAAGACCTTTGATTTACGAGGAGTGAAAAAAACAGAGGAGAAGTAAGGAAAAAGTTGG 401 Query 357 GACTTGA 363 ||||||| Sbjct 402 GACTTGA 408 > AT5G22520.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22530.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:7478930-7479527 FORWARD LENGTH=598 Length=598 Score = 84.2 bits (45), Expect = 8e-16 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 266 TTCTTCATCCTTGAAAAATGATTTCAACAAAGTGAAGACCTTTGATTTACGAGGAGT 322 ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 322 TTCTTCATCAGTGAATAATGATTTCAACAAAGTGAAGACCTTTGATATACGAGGAGT 378 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17091034660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5