BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941854 Length=496 Score E Sequences producing significant alignments: (Bits) Value AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846081-784764... 804 0.0 > AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846081-7847643 FORWARD LENGTH=734 Length=734 Score = 804 bits (435), Expect = 0.0 Identities = 471/488 (97%), Gaps = 3/488 (1%) Strand=Plus/Plus Query 11 gagagagaa-aatggcgtcgtcatcgtcgagaggagagatggagaagaTGGGAATCGATC 69 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 53 GAGAGAGAAGAATGGCGTCGTCATCATCGAGAGGAGAGATGGAGAAGATGGGAATCGATC 112 Query 70 AGCTGAAAGCGTTGAAGGAGCAAGCGGATCTGGAAGTGAATCTCCTTCAAGATAGTCTTA 129 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| | Sbjct 113 AGCTAAAAGCTTTGAAGGAGCAAGCAGATCTGGAAGTGAATCTTCTTCAAGATAGTCTCA 172 Query 130 ACAACATCCGTACAGCCACCGTCCGTCTTGATGCCGCCGCCGCAGCTCTCAACGATCTCT 189 |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 173 ACAACATCCGTACAGCTACCGTTCGTCTCGATGCCGCCGCCGCAGCTCTCAACGATCTCT 232 Query 190 CTCTTCGACCTCAAGGTAAGAAGATGCTTGTACCACTGACTGCTTCTCTATACGTGCCTG 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 233 CTCTTCGACCTCAAGGTAAGAAGATGCTTGTACCACTGACTGCTTCTCTATACGTGCCTG 292 Query 250 GGACACTTGATGAAGCTGATAAGGTTTTAGTTGATATTGGCACTGGTTACTTCATCGAGA 309 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 293 GGACACTTGATGAAGCTGATAAGGTTTTAGTTGATATTGGCACTGGTTACTTCATTGAGA 352 Query 310 AAACAATGGATGATGGAAAAGATTATTGTCAGAGGAAGATTCA-CTTGCTCAAATCCAAC 368 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 353 AAACAATGGATGATGGAAAAGATTATTGTCAGAGGAAGAT-CAACTTGCTCAAATCCAAC 411 Query 369 TTTGACCAACTTTTTGAGGTCGCAGCGAAAAAGAAAAGCGTGGCAGATGAAGCTGGGATG 428 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 412 TTTGATCAACTTTTTGAGGTCGCAGCGAAAAAGAAAAGCGTGGCAGATGAAGCTGGAATG 471 Query 429 GTCTTGCAGGCCAAAGTTAAACAGTTAACAGCTGCAACCACGTCATGAAAATTCTTCCTT 488 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 472 GTCTTGCAGGCCAAAGTTAAACAGTTAACAGCTGCAACCACGTCGTGAAAATTATTCCTT 531 Query 489 CTCTAGTG 496 |||||||| Sbjct 532 CTCTAGTG 539 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23660283237 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5