BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941873
Length=949
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23470.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1181 0.0
AT2G02290.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 1158 0.0
AT1G20320.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 196 3e-49
> AT5G23470.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr5:7913861-7914769 FORWARD LENGTH=909
Length=909
Score = 1181 bits (639), Expect = 0.0
Identities = 827/917 (90%), Gaps = 16/917 (2%)
Strand=Plus/Plus
Query 21 ATGTCTCTTGTTGAAAA-CTCTTCTCTTGAACCACAATCCAAAAGACGTAAGATCGATAC 79
|||||||| |||||||| || || |||||| |||||||||||||||||||||||| || |
Sbjct 1 ATGTCTCTAGTTGAAAACCT-TTTTCTTGAGCCACAATCCAAAAGACGTAAGATCAATCC 59
Query 80 AGAGATCAAAGAGTCTCCATCTCGTAATTGCGAA-CACTGGTTCGTCCGCAACAAAATCT 138
||||| || ||||||||| |||| ||||||| || || |||||||||||||| || ||||
Sbjct 60 AGAGACCATAGAGTCTCCGTCTCCTAATTGC-AATCATTGGTTCGTCCGCAATAAGATCT 118
Query 139 GTATCTCCTGCAATACAACACTGGACAAATACGATGGAAGATCTTTTGATTATCTCTACA 198
||||||||||| |||||||| ||||||| | ||| || ||||||||||||||||||||||
Sbjct 119 GTATCTCCTGCTATACAACAGTGGACAATTTCGAAGGCAGATCTTTTGATTATCTCTACA 178
Query 199 AAGGAATGCATATGAGTCACGAAGCTTTAGTTTTTACAAAACGGG-TCATCTCTCAAACC 257
|||| ||||| |||||| |||||||||||| |||||||||| ||| ||||||||||||||
Sbjct 179 AAGGGATGCAGATGAGTAACGAAGCTTTAGGTTTTACAAAA-GGGCTCATCTCTCAAACC 237
Query 258 TCTTGGCTTGAAGACAAGAAGCTTCACTTAGTACTTGACTTGGACCACACGCTTGTTCAC 317
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 238 TCTTGGCTTGAAGACAAGAAGCTTCACTTAGTACTTGACTTGGACCAGACGCTTATTCAC 297
Query 318 ACCATTAAAGCTTCACAGCTTTATGAATCTGAAAAGTGTTTAACAGAAGAGGTTGGATCG 377
||||||||| |||||| |||||||||||||||||||| | ||| ||| || |||| ||||
Sbjct 298 ACCATTAAAACTTCACTGCTTTATGAATCTGAAAAGTATATAATAGAGGAAGTTGAATCG 357
Query 378 AGGAAAGATTTATGGAGATTCAACAGTGGGTTTCCTGATGAATCATTGATAAAGCTGAGA 437
||||||||| || ||||||||||| ||| |||||||| ||||| ||||||||| |||||
Sbjct 358 AGGAAAGATATAAAGAGATTCAACACTGGCTTTCCTGAAGAATCTTTGATAAAGTTGAGA 417
Query 438 CCTTTTGTTCACCAGTTTCTGAAAGAATGCAATGAGATGTTCTCCATGTATGTTTACACA 497
||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 418 CCTTTTGTTCACCAGTTTCTGAAAGAATGTAATGAGATGTTCTCTATGTACGTTTACACA 477
Query 498 AAGGGTGGTTGTGATTATGCTCAGGTT-GTGTTGGAGTTGATTGATCCGGAGAAGATTTA 556
|||||||||| ||| ||||||| || | ||||||||| ||||||||||||| ||| ||||
Sbjct 478 AAGGGTGGTTATGACTATGCTC-GGCTCGTGTTGGAGATGATTGATCCGGACAAGTTTTA 536
Query 557 CTTTGGAAATCGGGTTATAACGAGAAGAGAGAGTCCTGATTTGAAGACGCTTGATCTTGT 616
|||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 537 CTTTGGCAATCGGGTTATAACGAGAAGAGAGAGTCCTGGTTTTAAGACGCTTGATCTTGT 596
Query 617 GTTGGCTGATGAACGTGGGGTTGTGATTGTTGATGATAAGTGTAGTGTTTGGCCTCATGA 676
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 597 GTTGGCTGATGAACGTGGGATTGTGATTGTTGATGATACCAGTAGTGTTTGGCCTCATGA 656
Query 677 CAAGAAAAACTTGCTGCAGATCGCAAAGTACAAGTATTTTGGAGACCAA-TCTTGTTCAT 735
||||||||||||||||||||| || | ||||||||||||||||||| || ||||||| |
Sbjct 657 CAAGAAAAACTTGCTGCAGATTGCTAGGTACAAGTATTTTGGAGAC-AAGTCTTGTTTGT 715
Query 736 TTTCAGAATG-TAAGAATAAGAGAGATGAGAGTGAGGAGAAAGGACCATTGGATATTGTT 794
|||||||| | |||||| |||| |||||||||||| ||||||||||||||| ||| || |
Sbjct 716 TTTCAGAA-GATAAGAAGAAGATAGATGAGAGTGATGAGAAAGGACCATTGAATACTGCT 774
Query 795 TTGAGATTCCTCAAGGATGTTCAC-AATGAATTCTTCTGTGACTGGTCGAGGAAAGACTT 853
|||||||||||||||||||||||| || |||||||||| ||||||||||| |||||||||
Sbjct 775 TTGAGATTCCTCAAGGATGTTCACGAA-GAATTCTTCTATGACTGGTCGAAGAAAGACTT 833
Query 854 GGATTCAGTGGATGTGAGGCCGTTGCTAAAAGAGATTTCTTCGAGATGGAAGCACAAAGC 913
|||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||
Sbjct 834 GGATTCAGTGGATGTGAGGCCGTTGCTAAAGGAGATTTCTTTGAGATGGAAGCGTAAAGC 893
Query 914 GGA-GGTTGTGGTTTGA 929
|| ||| |||||||||
Sbjct 894 AGACGGT-GTGGTTTGA 909
> AT2G02290.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr2:604453-605361 FORWARD LENGTH=909
Length=909
Score = 1158 bits (627), Expect = 0.0
Identities = 820/914 (90%), Gaps = 10/914 (1%)
Strand=Plus/Plus
Query 21 ATGTCTCTTGTTGAAAA-CTCTTCTCTTGAACCACAATCCAAAAGACGTAAGATCGATAC 79
|||||||| |||||||| || ||||||||| |||||| |||||||||||||||||||| |
Sbjct 1 ATGTCTCTAGTTGAAAACCT-TTCTCTTGAGCCACAACCCAAAAGACGTAAGATCGATCC 59
Query 80 AGAGATCAAAGAGTCTCCATCTCGTAATTGCGA-ACACTGGTTCGTCCGCAACAAAATCT 138
|||| ||||||||||||| |||||||| ||| | ||||||||||||||||| ||| |||
Sbjct 60 AGAGGTCAAAGAGTCTCCGTCTCGTAACTGC-AGTCACTGGTTCGTCCGCAATAAAGTCT 118
Query 139 GTATCTCCTGCAATACAACACTGGACAAATACGATGGAAGATCTTTTGATTATCTCTACA 198
|| ||| |||||||||| | ||||||| ||| | || |||||||| ||||| |||||||
Sbjct 119 GTGCCTCTTGCAATACAATAGTGGACAATTACCAAGGCAGATCTTTCGATTACCTCTACA 178
Query 199 AAGGAATGCATATGAGTCACGAAGCTTTAGTTTTTACAAAACGGGTCATCTCTCAAACCT 258
||| || || |||||| | |||||||||| ||||||||||||| |||||||||||||||
Sbjct 179 CAGGGATTCAGATGAGTAATGAAGCTTTAGGTTTTACAAAACGGCTCATCTCTCAAACCT 238
Query 259 CTTGGCTTGAAGACAAGAAGCTTCACTTAGTACTTGACTTGGACCACACGCTTGTTCACA 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CTTGGCTTGAAGACAAGAAGCTTCACTTAGTACTTGACTTGGACCACACGCTTGTTCACA 298
Query 319 CCATTAAAGCTTCACAGCTTTATGAATCTGAAAAGTGTTTAACAGAAGAGGTTGGA-TCG 377
||||||||| ||||||||||| |||||||||||||| | |||||||||| || ||| |||
Sbjct 299 CCATTAAAGTTTCACAGCTTTCTGAATCTGAAAAGTATATAACAGAAGAAGT-GGAATCG 357
Query 378 AGGAAAGATTTATGGAGATTCAACAGTGGGTTTCCTGATGAATCATTGATAAAGCTGAGA 437
||||||||| || |||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct 358 AGGAAAGATCTACGGAGATTCAACACTGGGTTTCCTGAAGAATCTTTGATAAAGCTGAGA 417
Query 438 CCTTTTGTTCACCAGTTTCTGAAAGAATGCAATGAGATGTTCTCCATGTATGTTTACACA 497
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 418 TCTTTTGTTCACCAGTTTCTGAAAGAATGTAACGAGATGTTCTCTTTGTATGTTTACACA 477
Query 498 AAGGGTGGTTGTGATTATGCTCAGGTTGTGTTGGAGTTGATTGATCCGGAGAAGATTTAC 557
|||||||||| ||| ||||||||| | ||||||||| ||||||||||||| |||||||||
Sbjct 478 AAGGGTGGTTATGACTATGCTCAGCTCGTGTTGGAGATGATTGATCCGGATAAGATTTAC 537
Query 558 TTTGGAAATCGGGTTATAACGAGAAGAGAGAGTCCTGATTTGAAGACGCTTGATCTTGTG 617
||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 538 TTTGGCAATCGGGTTATAACGAGAAGAGAGAGTCCTGGTTTTAAGACGCTTGATCTTGTG 597
Query 618 TTGGCTGATGAACGTGGGGTTGTGATTGTTGATGATAAGTGTAGTGTTTGGCCTCATGAC 677
||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct 598 TTGGCTGATGAGCGTGGAATTGTGGTTGTTGATGATAAGAGTAGTGTTTGGCCTCATGAC 657
Query 678 AAGAAAAACTTGCTGCAGATCGCAAAGTACAAGTATTTTGGAGACCAATCTTGTTCATTT 737
|||||||||||||| ||||| || | |||||||||||||||||| || ||||||| ||
Sbjct 658 AAGAAAAACTTGCTACAGATTGCTAGGTACAAGTATTTTGGAGATCAGTCTTGTTTGTTG 717
Query 738 TCAGAATGTAAGAATAAGAGAGATGAGAGTGAGGAGAAAGGACCATTGGATATTGTTTTG 797
|||||||||||||| |||| |||||||||||| ||||||||||||||| | | || ||||
Sbjct 718 TCAGAATGTAAGAAGAAGATAGATGAGAGTGATGAGAAAGGACCATTGAACACTGCTTTG 777
Query 798 AGATTCCTCAAGGATGTTCAC-AATGAATTCTTCTGTGACTGGTCGAGGAAAGACTTGGA 856
|||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 778 AGATTCCTCATGGATGTTCACGAA-GAATTCTTCTGTGACTGGTCGAGAAAAGACTTGGA 836
Query 857 TTCAGTGGATGTGAGGCCGTTGCTAAAAGAGATTTCTTCGAGATGGAAGCACAAAGCGGA 916
||| |||||||| ||||| |||||||| |||||||||| ||||||||||| ||||| ||
Sbjct 837 TTCTGTGGATGTCAGGCCTTTGCTAAAGGAGATTTCTTTGAGATGGAAGCGTAAAGCAGA 896
Query 917 -GGTTGTGGTTTGA 929
||| |||||||||
Sbjct 897 CGGT-GTGGTTTGA 909
> AT1G20320.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr1:7033657-7034874 REVERSE LENGTH=1218
Length=1218
Score = 196 bits (106), Expect = 3e-49
Identities = 367/487 (75%), Gaps = 42/487 (9%)
Strand=Plus/Plus
Query 424 TGATAAAGCTGAGACCTTTTGTTCACCAGTTTCTGAAAGAATG-CAATGAGATGTTCTCC 482
||||||| || |||||||||||||| |||||||||||||| | ||| ||||| ||||||
Sbjct 362 TGATAAAACTTCGACCTTTTGTTCACGAGTTTCTGAAAGAA-GCCAACGAGATTTTCTCC 420
Query 483 ATGTATGTTTACACAAAGGGTG-GTTGTGATTATGCTCAGGTTGTGTTGGAGTTGATTGA 541
|||||||| ||||| | ||| | | |||| || ||||||| |||| || | | ||||||
Sbjct 421 ATGTATGTCTACACGATGGG-GAATCGTGACTACGCTCAGGCTGTGCTGAAATGGATTGA 479
Query 542 TCCGGAG-AAGATTTACTTTGGAAATCGGGTTATAACGAGAAGA-GAGAGTCCTGATTT- 598
|||| || ||| | |||||||| || | || || || || ||| |||||| | |||
Sbjct 480 TCCGAAGAAAG-TATACTTTGGGGATAGAGTCATTACCAG-AGACGAGAGTGGT-TTTTC 536
Query 599 GAAGACGCTTGATCTTGTGTTGGCTGATGAACGTGGGGTTGTGATTGTTGATGATAAGT- 657
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||| | |
Sbjct 537 GAAGACGCTTGATCTTGTGTTGGCTGATGAGTGTGGAGTTGTGATTGTGGATGACAC-TC 595
Query 658 GT-AGTGTTTGGCCTCATGACAAGAAAAA-CTTGCTGCAGATCGCAAAGTACAAGT-ATT 714
|| | |||||||||| || | ||| || || ||| ||||| | ||||||| || | |
Sbjct 596 GTCA-TGTTTGGCCTGATCATGAGAGGAATCT-GCTACAGATTACCAAGTACA-GTTACT 652
Query 715 TTGGAGACCA-A-TCTTGTTCATTT-TCAGAATGT-A---AGA--ATAAGAGAGATGAGA 765
| |||| | | || || | | ||| ||| | | ||| | |||||||| ||||
Sbjct 653 TCAGAGATTATAGTCATGATAAGGAGTCAAAATCTTACGCAGAGGAGAAGAGAGACGAGA 712
Query 766 GTGAGGAGAA-AGG-ACCATTGGATATTGTTTTGAGA-TTCCTCAAGGATGTTCAC-AAT 821
|| |||| | ||| | |||||| | |||||||| | ||| |||||||||||||| ||
Sbjct 713 GT-AGGA-ACCAGGGATCATTGGCGAATGTTTTGAAAGTTC-TCAAGGATGTTCACCAA- 768
Query 822 GAATTCTTCTGTGACTGG--TCGAGGAAAGACTTGGATTCAGTGGATGTGAGGCCGTTGC 879
||||| ||| | | | || | |||||| || |||||| ||| ||||||| |||||
Sbjct 769 GAATTTTTCAGAGGC-GGAATTGAGGAA----TTAGATTCAAAGGACGTGAGGCTGTTGC 823
Query 880 TAAAAGA 886
|| ||||
Sbjct 824 TACAAGA 830
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46416351828
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5