BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941995
Length=1834
Score E
Sequences producing significant alignments: (Bits) Value
AT5G24430.1 | Symbols: | Calcium-dependent protein kinase (CDP... 2942 0.0
AT3G49370.1 | Symbols: | Calcium-dependent protein kinase (CDP... 1698 0.0
> AT5G24430.1 | Symbols: | Calcium-dependent protein kinase (CDPK)
family protein | chr5:8339144-8343102 REVERSE LENGTH=2220
Length=2220
Score = 2942 bits (1593), Expect = 0.0
Identities = 1756/1834 (96%), Gaps = 14/1834 (1%)
Strand=Plus/Plus
Query 1 TTTGAGCTTCACAATCAACGGTCATGGGTCATTGTTACAGCCGGAACATCTCCGCCGTCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 TTTGAGCTTCACAATCAACGGTCATGGGTCATTGTTACAGCCGGAACATCTCCGCCGTCG 226
Query 61 AAGATGACGAGATCCCCACCGGAAACGGCGAGGTTTCGAATCAACCATCTCAATCGACGC 120
| || ||||||||||||||||| |||||||||||||||||||||||| || | |
Sbjct 227 AGGACGACGAGATCCCCACCGGTAACGGCGAGGTTTCGAATCAACCA--TC--T-----C 277
Query 121 AAAATCACCGGCATGCTTCGATTCCTCAGTCTCCGGTTGCTTCTGGTGCTTCTGAAGTCA 180
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 278 AAAATCACCGGCATGCTTCGATTCCTCAGTCTCCGGTTGCTTCTGGTACTCCTGAAGTCA 337
Query 181 ACTCATATAACATTAGCCCTTTCCAAAGTCCGTTACCGGCGGGAGTAGCTCCATCACCGG 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 338 ACTCATATAACATTAGCCCTTTCCAAAGCCCGTTACCGGCGGGAGTAGCTCCATCACCGG 397
Query 241 CGAGAACTCCGGGAAGAAAGTTCAAATGGCCGTTTCCTCCACCGTCACCTGCCAAACCGA 300
|||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 398 CGAGAACTCCGGGACGGAAGTTCAAATGGCCGTTTCCTCCACCGTCACCTGCGAAACCGA 457
Query 301 TTATGGCGGCTTTGAGACGACGACGTGGCGCTCCGCCGCAGCCTCGAGATGAACCGATCC 360
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 458 TTATGGCGGCTTTGAGACGACGACGTGGCGCTCCGCCTCAGCCTCGAGATGAGCCGATCC 517
Query 361 CGGAGGATAGTGAAGATGTAGCAGATCACGG-CG-G-CGGAGGCGGCGGAGAGAGGTTAG 417
||||||||||||||||||||| ||||||||| | | | | |||||||||||||||||||
Sbjct 518 CGGAGGATAGTGAAGATGTAGTAGATCACGGTGGTGACAGTGGCGGCGGAGAGAGGTTAG 577
Query 418 ATAAGAATTTCGGGTTTGGGAAGAACTTTGAAGGGAAGTACGAGCTAGGGAAAGAAGTAG 477
|||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||
Sbjct 578 ATAAGAATTTCGGGTTTGGGAAGAACTTCGAAGGGAAGTATGAGTTAGGGAAAGAAGTAG 637
Query 478 GGCGAGGGCATTTTGGTCATACTTGTTGGGCAAAGGCAAAGAAAGGGAAGATGAAGAACC 537
|||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct 638 GGCGAGGGCATTTTGGTCATACTTGTTGGGCAAAAGCGAAGAAAGGCAAGATGAAGAACC 697
Query 538 AAACCGTGGCTGTCAAAATCATCTCTAAAGCTAAGATGACGTCGGCGCTATCGATTGAAG 597
|||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||
Sbjct 698 AAACCGTGGCTGTCAAAATCATCTCTAAAGCTAAGATGACGTCGACGTTATCTATTGAAG 757
Query 598 ATGTTCGTCGAGAAGTGAAATTGCTGAAAGCTTTATCTGGGCATAGGCATATGGTTAAGT 657
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 758 ATGTTCGTAGAGAAGTGAAATTGCTGAAAGCTTTATCAGGGCATAGGCATATGGTTAAGT 817
Query 658 TCTATGATGTATATGAGGATGCTGATAATGTCTTTGTTGTTATGGAGTTATGCGAAGGTG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 818 TCTATGATGTATATGAGGATGCTGATAATGTCTTTGTTGTTATGGAGTTATGCGAAGGTG 877
Query 718 GAGAGCTATTGGATAGAATTTTGGCGAGAGGTGGACGATACCCTGAAGTTGATGCCAAAC 777
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 878 GAGAGCTATTGGATAGAATTTTGGCGAGAGGTGGACGATACCCTGAAGTCGATGCCAAAC 937
Query 778 GTATTCTTGTGCAGATTTTATCTGCAACAGCATTTTTTCACCTTCAAGGTGTTGTGCACC 837
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 938 GTATTCTTGTGCAGATTTTGTCTGCAACAGCATTTTTTCACCTTCAAGGTGTCGTGCACC 997
Query 838 GTGATCTGAAGCCGGAGAATTTTCTCTTTACCAGCAGAAATGAGGATGCGATACTCAAGG 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 GTGATCTGAAGCCGGAGAATTTTCTCTTTACCAGCAGAAATGAGGATGCGATACTCAAGG 1057
Query 898 TCATAGATTTTGGCTTGTCTGATTTCATTAGATACGATCAGCGTCTCAATGATGTTGTAG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 TCATAGATTTTGGCTTGTCTGATTTCATTAGATACGATCAGCGTCTCAATGATGTTGTAG 1117
Query 958 GGAGTGCGTACTATGTTGCACCTGAAGTACTCCATAGGTCTTACAGCACTGAAGCAGATA 1017
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 GAAGTGCATACTATGTTGCACCTGAAGTACTCCATAGGTCTTACAGCACTGAAGCAGATA 1177
Query 1018 TGTGGAGCATCGGTGTCATAAGTTACATACTTCTCTGTGGAAGCAGACCTTTCTATGGAA 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 TGTGGAGCATCGGTGTCATAAGTTACATACTTCTCTGTGGAAGCAGACCTTTCTATGGAA 1237
Query 1078 GAACTGAATCTGCAATATTCCGCTGTGTGCTTAGAGCAAACCCTAATTTTGAGGATATGC 1137
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1238 GAACTGAGTCTGCAATATTCCGTTGTGTGCTTAGAGCAAACCCTAATTTTGAGGATATGC 1297
Query 1138 CCTGGCCTTCAATATCTCCTACTGCCAAGGACTTCGTGAAAAGGCTTCTGAATAAGGACC 1197
| |||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||
Sbjct 1298 CTTGGCCTTCTATATCTCCTACTGCCAAAGACTTCGTGAAAAGGCTTTTGAACAAGGACC 1357
Query 1198 ATAGGAAACGAATGACAGCTGCTCAAGCTCTAGCTCATCCGTGGTTACGTGATGAAAACC 1257
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1358 ATAGGAAACGAATGACAGCTGCTCAAGCTCTAGCTCATCCGTGGTTACGTGACGAAAACC 1417
Query 1258 CCGGTTTACTTCTTGATTTCTCAGTCTACAAGTTGGTCAAGTCCTATATCCGTGCCTCAC 1317
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1418 CCGGTTTGCTTCTTGATTTCTCGGTCTACAAGTTGGTCAAGTCCTATATCCGTGCCTCAC 1477
Query 1318 CTTTCAGACGGTCAGCACTTAAGGCTCTCTCGAAAGCTATACCCGATGAAGAACTTGTGT 1377
||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1478 CTTTCCGACGATCAGCACTTAAGGCTCTCTCGAAAGCTATACCTGATGAAGAACTTGTGT 1537
Query 1378 TCCTTAAGGCACAGTTCATGCTCCTGGACCCTAAAGACGGAGGCCTATCCCTTAACTGTT 1437
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1538 TCCTTAAGGCACAGTTCATGCTCCTGGATCCTAAAGACGGAGGCCTATCCCTTAACTGTT 1597
Query 1438 TCACCACGGCCTTAACAAGATATGCTACTGATGCTATGATGGAATCAAGGCTTCCTGACA 1497
|||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1598 TCACAATGGCTTTAACAAGATATGCTACTGATGCTATGATGGAATCAAGGCTTCCTGACA 1657
Query 1498 TTTTAAACACGATGCAACCGCTATCGCAAAAGAAACTCGACTTTGATGAGTTCTGTGCGG 1557
||||||| ||||||||||| || |||||||||| || |||||||| |||||||||||||
Sbjct 1658 TTTTAAATACGATGCAACCTCTGGCGCAAAAGAAGCTTGACTTTGAAGAGTTCTGTGCGG 1717
Query 1558 CTGCGGTCAGCGTTTACCAACTGGAGGCTCTTGAAGAATGGGAACAGATTGCAACCTCAG 1617
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1718 CTGCGGTCAGTGTTTACCAACTGGAGGCTCTTGAAGAATGGGAACAGATTGCAACTTCAG 1777
Query 1618 CATTTGAGCACTTTGAACATGAAGGAAACCGAATAATATCGGTCCAAGAACTCGCGGGGG 1677
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||
Sbjct 1778 CATTTGAGCACTTTGAACATGAAGGAAACCGAATCATATCTGTCCAAGAACTCGCCGGGG 1837
Query 1678 AGATGAGCCTGGGACCGAGTGCATATCCTCTGCTCAAGGATTGGATCCGGAA-TTCAGAT 1736
|||||||| |||||||||||||||||||||||||||||||||||||||| || ||| |||
Sbjct 1838 AGATGAGCGTGGGACCGAGTGCATATCCTCTGCTCAAGGATTGGATCCG-AAGTTCGGAT 1896
Query 1737 GGAAAGCTGAGTTTCTTGGGCTACGCTAAGTTCTTGCATGGTGTGACCGTACGAAGCTCA 1796
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1897 GGAAAGCTGAGTTTCTTGGGGTACGCTAAGTTCTTGCATGGTGTGACCGTACGAAGCTCA 1956
Query 1797 AGCTCGAGACCTAGGTGACACATCATGATGTAAA 1830
|||||||||||||||||||||| |||||||||||
Sbjct 1957 AGCTCGAGACCTAGGTGACACACCATGATGTAAA 1990
> AT3G49370.1 | Symbols: | Calcium-dependent protein kinase (CDPK)
family protein | chr3:18304742-18307906 REVERSE LENGTH=1997
Length=1997
Score = 1698 bits (919), Expect = 0.0
Identities = 1417/1656 (86%), Gaps = 40/1656 (2%)
Strand=Plus/Plus
Query 169 CTTCTGAAGTCAACTCATATAACATTAGCCC-TTTCCAAAGTCCGTTACCGGCGGGAGTA 227
|||| ||||||||| | || ||||| ||||| ||| ||||| ||||||||||||||||||
Sbjct 143 CTTCAGAAGTCAACCCTTACAACATCAGCCCATTT-CAAAGCCCGTTACCGGCGGGAGTA 201
Query 228 GCTCCATCACCGGCGAGAACTCCGGGAAGAAAGTTCAAATGGCCGTTTCCTCCACCGTCA 287
|||||||| ||||||||||||||||||||||| ||||||||||| || || || || |||
Sbjct 202 GCTCCATCTCCGGCGAGAACTCCGGGAAGAAAATTCAAATGGCCATTCCCGCCTCCTTCA 261
Query 288 CCTGCCAAACCGATTATGGCGGCTTTGAGACGACGACGTGGCGCTCCGCCGCAGCCTCGA 347
||||| |||||||||||||||||||| ||||| ||||| || | | || || |||||
Sbjct 262 CCTGCGAAACCGATTATGGCGGCTTTAAGACGGCGACGAGGTACAGCACCACATCCTCGG 321
Query 348 GATGAACCGATCCCGGAGGATAGTGAAGATGTAGCAGATCACGGCGGCGGAGGCGGCGGA 407
|||| |||||||| ||||||||||||| | || || | ||||||| || ||||
Sbjct 322 GATGGTCCGATCCCTGAGGATAGTGAAGCCG--GCGGA--A--GCGGCGGCGGAATCGGA 375
Query 408 GAGAGGTTAGATAAGAATTTCGGGTTTGGGAAGAACTTTGAAGGGAAGTACGAGCTAGGG 467
|| ||||||||||| |||||||| |||| |||||| |||||||| ||||| ||||| |||
Sbjct 376 GAAAGGTTAGATAAAAATTTCGGATTTGCGAAGAATTTTGAAGGTAAGTATGAGCTTGGG 435
Query 468 AAAGAAGTAGGGCGAGGGCATTTTGGTCATACTTGTTGGGC-AAAGGCAAAGAAAGGGAA 526
| ||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct 436 AGAGAAGTAGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAA-GCTAAGAAAGGGAA 494
Query 527 GAT-GAAGAACCAAACCGTGGCTGTCAAAATCATCTCTAAAGCTAAGATGACGTCGGCGC 585
||| ||| ||||| || || |||||||||||||||||| |||||||||| || ||
Sbjct 495 GATCAAAG-GTCAAACAGTTGCAGTCAAAATCATCTCTAAATCTAAGATGACATCAGCTT 553
Query 586 TATCGATTGAAGATGTTCGTCGAGAAGTGAAATTGCTGAAAGCTTTATCTGGGCATAGGC 645
| ||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||| |
Sbjct 554 TGTCGATTGAAGATGTTCGTCGAGAGGTGAAGTTGTTGAAAGCTTTGTCTGGGCATAGTC 613
Query 646 ATATGGTTAAGTTCTATGATGTATATGAGGATGCTGATAATGTCTTTGTTGTTATGGAGT 705
| |||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||
Sbjct 614 ACATGGTTAAGTTCTATGATGTGTTTGAGGATTCGGATAATGTCTTTGTTGTTATGGAGT 673
Query 706 TATGCGAAGGTGGAGAGCTATTGGATAGAATTTTGGCGAGAGGTGGACGATACCCTGAAG 765
|||| |||||||||||||||||||| || ||||||||||||||||| ||||| || ||||
Sbjct 674 TATGTGAAGGTGGAGAGCTATTGGACAGTATTTTGGCGAGAGGTGGTCGATATCCGGAAG 733
Query 766 TTGATGCCAAACGTATTCTTGTGCAGATTTTATCTGCAACAGCATTTTTT-CACCTTCAA 824
|| || || ||||||||||| ||||||||||||||||| || |||||| || ||||||
Sbjct 734 CAGAAGCTAAGCGTATTCTTGTACAGATTTTATCTGCAACTGC-TTTTTTCCATCTTCAA 792
Query 825 GGTGTTGTGCACCGTGATCTGAAGCCGGAGAATTTTCTCTTTACCAGCAGAAATGAGGAT 884
||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||
Sbjct 793 GGTGTTGTGCACCGTGATCTGAAACCGGAGAATTTTCTCTTTACAAGCAAAAATGAGGAT 852
Query 885 GC-GATACTCAAGGTCATAGATTTTGGCTTGTCTGATTTCATTAGATACGATCAGCGTCT 943
|| | |||||||||| |||||||||||||||||||||| | ||||| |||||||||||
Sbjct 853 GCAG-TACTCAAGGTTATAGATTTTGGCTTGTCTGATTACGCTAGATTTGATCAGCGTCT 911
Query 944 CAATGATGTTGTAGGGAGTGCGTACTATGTTGCACCTGAAGTACTCCATAGGTCTTACAG 1003
||| ||||| ||||| ||||| ||||||||||||||||||||||| || || || || ||
Sbjct 912 CAACGATGTGGTAGGAAGTGCATACTATGTTGCACCTGAAGTACTTCACAGATCCTATAG 971
Query 1004 CACTGAAGCAGATATGTGGAGCATCGGTGTCATAAGTTACATACTT-CTCTGTGGAAGCA 1062
||| ||||||||||| |||||||| ||||||||| ||||||| || ||||||||||| |
Sbjct 972 CACCGAAGCAGATATATGGAGCATTGGTGTCATATCTTACATA-TTACTCTGTGGAAGTA 1030
Query 1063 GACCTTTCTATGGAAGAACTGAATCTGCAATATTCCGCTGTGTGCTTAGAGCAAACCCTA 1122
||||||| || |||||||| || |||||||| || || |||||||||||||| ||||| |
Sbjct 1031 GACCTTTTTACGGAAGAACCGAGTCTGCAATTTTTCGTTGTGTGCTTAGAGCGAACCCGA 1090
Query 1123 ATTTTGAGGATATGCCCTGGCCTTCAATATCTCCTACTGCCAAGGACTTCGTGAAAAGGC 1182
|||| || ||| |||| ||||||||||||||||||| |||||| ||||| ||||||||||
Sbjct 1091 ATTTCGACGATTTGCCGTGGCCTTCAATATCTCCTATTGCCAAAGACTTTGTGAAAAGGC 1150
Query 1183 TTCTGAATAAGGACCATAGGAAACGAATGACAGCTGCTCAAGCTCTAGCTCATCCGTGG- 1241
|| ||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct 1151 TTTTGAATAAAGACCATAGGAAAAGAATGACAGCTGCTCAAGCTTTAGCTCATCCATGGC 1210
Query 1242 TTACGTGATGAAAACCCCGGTTTACTTCTTGATTTCTC-AGTCTACAAGTTGGTCAAGTC 1300
|| || |||||||| || ||||||||||| |||||||| | ||||||| ||||| |||||
Sbjct 1211 TT-CGAGATGAAAATCCTGGTTTACTTCTGGATTTCTCTA-TCTACAAATTGGTGAAGTC 1268
Query 1301 CTATATCCGTGCCTCACCTTTCAGACG-GTCAGCACTTAAGGCTCTCTCGAAAGCTATAC 1359
||||| ||||| || |||||| || | | ||||||||||| |||| || ||||||||||
Sbjct 1269 TTATATTCGTGCATCGCCTTTCCGAAGAG-CAGCACTTAAGTCTCTATCCAAAGCTATAC 1327
Query 1360 CCGATGAAGAACTTGTGTTCCTTAAGGCACAGTTCATGCTCCTGGACCCTA-AAGACGGA 1418
|||| || ||||| ||||||||||| |||||||| |||||| |||| || | |||| |||
Sbjct 1328 CCGAAGAGGAACTCGTGTTCCTTAAAGCACAGTTTATGCTCTTGGAGCC-AGAAGATGGA 1386
Query 1419 GGCCT--ATCCCTTAACTGTTTCACCACGGC-CTTAACAAGATATGCTACTGATGCTATG 1475
||| | ||| || || |||||||||||| || | ||||||||||||| |||||||||
Sbjct 1387 GGCTTGCATC--TTCACAATTTCACCACGGCTCTGA-CAAGATATGCTACGGATGCTATG 1443
Query 1476 ATGGAATCAAGGCTTCCTGACATTTTAAACACGATGCAACCGCTATCGCA-A-AAGAAAC 1533
|| ||||| || ||||||||||| ||||||| ||||||||| | | ||| | |||||||
Sbjct 1444 ATCGAATCTAGACTTCCTGACATATTAAACATGATGCAACCA-T-TGGCACATAAGAAAC 1501
Query 1534 TCGACTTTGATGAGTTCTGTGCGGCTGCGGTCAGCGTTTACCAACTGGAGGCTCTTGAAG 1593
| || ||||| ||||| ||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct 1502 TTGATTTTGAAGAGTTTTGTGCGGCTTCAGTCAGCGTTTATCAACTTGAGGCTCTTGAAG 1561
Query 1594 AATGGGAACAGATTGCAACC-TCAGCATTTGAGCACTTTGAACA-TGAAGGAAACCGAAT 1651
||||||||||||| ||||| | ||| ||||| ||||||||| | |||||||| ||||
Sbjct 1562 AATGGGAACAGATCGCAACGGT-AGCCTTTGAACACTTTGAA-AGTGAAGGAAGCCGAGC 1619
Query 1652 AATATCGGTCCAAGAACTCGCGGGGGAGATGAGCCTGGGACCGAGTGCATATCCTCTGCT 1711
|| ||||||||||||||||| | ||||||||| ||||||| | ||| |||||||||||
Sbjct 1620 CATTTCGGTCCAAGAACTCGCCGAGGAGATGAGTTTGGGACCAAATGCGTATCCTCTGCT 1679
Query 1712 CAAGGATTGGATCCGGAATTCAGATGGAAAGCTGAGTTTCTTGGGCTACGCTAAGTTCTT 1771
||||||||||||||| | || |||||| ||||||| |||||| || ||||| ||||||||
Sbjct 1680 CAAGGATTGGATCCGTAGTTTAGATGGGAAGCTGAATTTCTTAGGTTACGCCAAGTTCTT 1739
Query 1772 GCATGGTGTGACCGTACGAAGCTCAAGCTCGAGACC 1807
||| |||||||| || |||||||| |||||||||||
Sbjct 1740 GCACGGTGTGACTGTTCGAAGCTCGAGCTCGAGACC 1775
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90762585360
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5