BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942009 Length=401 Score E Sequences producing significant alignments: (Bits) Value AT5G24550.1 | Symbols: BGLU32 | beta glucosidase 32 | chr5:8392... 516 7e-146 > AT5G24550.1 | Symbols: BGLU32 | beta glucosidase 32 | chr5:8392059-8395302 REVERSE LENGTH=1605 Length=1605 Score = 516 bits (279), Expect = 7e-146 Identities = 331/356 (93%), Gaps = 3/356 (1%) Strand=Plus/Plus Query 1 TTATCGGAATAAATTACTACATGGCACGGA-TTGTCGCTCACGATCTTCACGTCGATCTT 59 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct 1013 TTATCGGAATAAATTACTACACGGCAC-GATTTGTCGCTCACGATCTTCACGTCGATCTT 1071 Query 60 TTCCGGCCTCGCTTCACAACCGACCAACATCTCCAATACAGATTGACAAATCGTAGCGGC 119 | ||| ||||||||||| || |||||||| |||||||||| ||||||||||||||||||| Sbjct 1072 TCCCGACCTCGCTTCACGACTGACCAACACCTCCAATACAAATTGACAAATCGTAGCGGC 1131 Query 120 GACAACATCTCATCAGAATCGGATGGAACCAAAATTCTCTGGTCATATACGGAAGGCTTA 179 ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||| || Sbjct 1132 GACCACATCTCATCAGAATCGGATGGGACAAAAATTCTCTGGTCATATCCGGAAGGCCTA 1191 Query 180 CGAAAGCTTCTTAATTATATTAAAACTAAATATAACAATCCAACTATTTACATAACTGAA 239 |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 1192 CGAAAGCTTCTTAACTATATCAAAAATAAATATAACAATCCAACTATTTACATAACTGAA 1251 Query 240 AATGGTTTCGATGACTACGAAGATGGAACAGTGACACGTGATGAGATAATAGAAGACACA 299 || |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| Sbjct 1252 AACGGTTTCGATGACTACGAAAATGGATCAGTGACACGTGAAGAGATAATAGAAGACACA 1311 Query 300 AAGAGAATAAAGTACCACCAAAAACATCTTCGACAACTCCAGAAAGCGATCA-TGA 354 ||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct 1312 AAGAGAATAGAGTACCACCAAAACCATCTTCAACAACTCCAGAAAGCGATCACTGA 1367 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18950941373 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5