BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942011 Length=322 Score E Sequences producing significant alignments: (Bits) Value AT5G24560.1 | Symbols: AtPP2-B12, PP2-B12 | phloem protein 2-B1... 414 2e-115 > AT5G24560.1 | Symbols: AtPP2-B12, PP2-B12 | phloem protein 2-B12 | chr5:8402205-8403266 FORWARD LENGTH=756 Length=756 Score = 414 bits (224), Expect = 2e-115 Identities = 290/322 (90%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 1 TCCCTTCTCTCCAAAGCCAC-CATGTATGGAGCTTACATTGTTTTCAAAGAACAAGAAAT 59 |||||||||||||||||||| || || | |||||| |||||||||||||||||||||| Sbjct 433 TCCCTTCTCTCCAAAGCCACTAAT-TACAGTGCTTACCTTGTTTTCAAAGAACAAGAAAT 491 Query 60 GGGATCCTTTGGATTTGAGTCTCTGCCTTTGGAGATGAGCTTTTGTTCTACAAGAACTGA 119 |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| Sbjct 492 GGGATCCTTTGGATTTGAGTCTCTGCCTTTGGAGGTTAGCTTTCGTTCTACAAGAACTGA 551 Query 120 GGTTTATAATGATAGAAGAGTATTTCTTTTG-CAAGGAACGCAAGGGTGTAGAGAAGATG 178 |||||||| |||||||||| |||||| | || ||||| |||| || ||||||||||| Sbjct 552 AGTTTATAACAATAGAAGAGTTTTTCTTAAGTCA-GGAACACAAGAGTCTAGAGAAGATG 610 Query 179 GGTGGTTGGAGATTGAACTTGGTGAATATTATGTTGGTTCCGATGATGAGGAGCTTGAAA 238 ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||| Sbjct 611 GGTGGTTGGAGATTGAACTTGGTGAATATTATGTTGGTTTTGATGATGAGGAGATCGAAA 670 Query 239 TGAGCATCTTGGAGACGAGAGAAGGCGGTTGGAAAGGCGGAATCATTGTGCAAGGGATCT 298 ||||| | |||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 671 TGAGCGTATTGGAGACTAGAGAAGGCGGTTGGAAAGGCGGAATCATCGTTCAAGGGATCG 730 Query 299 AGATTAGGCCAAAAGAAGTGTT 320 ||||||||||||||||| |||| Sbjct 731 AGATTAGGCCAAAAGAATTGTT 752 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14979789202 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5