BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg942151

Length=409
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G25770.3 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   462    9e-130


> AT5G25770.3 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:8969215-8972125 REVERSE LENGTH=1597
Length=1597

 Score =  462 bits (250),  Expect = 9e-130
 Identities = 278/292 (95%), Gaps = 0/292 (0%)
 Strand=Plus/Plus

Query  88    AGGTGTGGAACAGAATAGCTCCTGGCCTAGCTTCTAAGTTTGATTCGCCTTACTCATTAC  147
             |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct  1206  AGGTGTGGAACAGAATAGCTCCTGGCCTAGCTTCGAAGTTTGATTCACCGTACTCATTAC  1265

Query  148   CAGTGATTGCTCCGCGGCCTCTTTACATCCTTAACGGAGCAAAAGATCCTCGATGTCCTC  207
             ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct  1266  CAGTGATTGCTCCACGGCCTCTTTACATCCTTAACGGCGCAAATGATCCTCGATGTCCTC  1325

Query  208   TTGGCGGACTAGAAGTTCCGTTAAAGAGAGCTGAGAAGGCGTATAAGGAAACTGCTTCTC  267
             |||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||
Sbjct  1326  TTGGCGGACTAGAACTTGCGTTAAAGAGAGCTGAAAAGGCGTATAAGGAAACAGCTTCTC  1385

Query  268   CTGAAAACTTCAAGTTCAAAGCAGAAGATGGAGTTGGGCACGAAGTGACGAGTTTCATGA  327
             ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct  1386  CTGGAAACTTCAAGTTCAAAGCAGAAGATGGAGTTGGACACGAAGCGACGAGTTTCATGA  1445

Query  328   TCAAAGAATCATCAGACTGGTTTGACAAATTCCTTAAAGAAGAAGATATGAC  379
             |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  1446  TCAAAGAATCATCAGACTGGTTTGACAAATTCCTTAAACAAGAAGATATGAC  1497


 Score =  104 bits (56),  Expect = 7e-22
 Identities = 68/74 (92%), Gaps = 0/74 (0%)
 Strand=Plus/Plus

Query  17    AGGGATGCATGCTTGGTTTGCTGCTGCAGCTAATACCCGCTATTCTGTGGCTGTCCCTTT  76
             ||||||||||||||||||||||||||||||| | || |||||||| |||| |||||| ||
Sbjct  1012  AGGGATGCATGCTTGGTTTGCTGCTGCAGCTGACACTCGCTATTCCGTGGTTGTCCCATT  1071

Query  77    AATCGGTGTTCAGG  90
             ||||||||||||||
Sbjct  1072  AATCGGTGTTCAGG  1085



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19353083365


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5