BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942189 Length=505 Score E Sequences producing significant alignments: (Bits) Value AT5G26060.1 | Symbols: | Plant self-incompatibility protein S1... 710 0.0 > AT5G26060.1 | Symbols: | Plant self-incompatibility protein S1 family | chr5:9104847-9105524 REVERSE LENGTH=678 Length=678 Score = 710 bits (384), Expect = 0.0 Identities = 460/497 (93%), Gaps = 4/497 (1%) Strand=Plus/Plus Query 1 ACATAATCAGAATTACACATATGGGAACTAACAAGATTCCCAAAACCCTCAACGGGAACT 60 ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 28 ACAAAATCAGAATTACACAAATGGGAACTAATAAGATTCCCAAAACCCTCAACGGGAACC 87 Query 61 TTGTTCTTATACTTATCATCACCATAATGATGGTGACTCACTCCCATGGATTTCGACTGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 88 TTGTTCTTATACTTATCATCACCATAATGATGGTGACTCACTCCCATGGATTTCAACTGG 147 Query 121 AGATCAAGAACGAGCTATCGGGAAGGTACAGGAAGCTTGTGTACAAATGCTGGTCCCGCG 180 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 148 AGATCAGGAACGAGCTATCAGGAAGGTACAGGAAGCTTGTGTACAAATGCTGGTCCCGCG 207 Query 181 ATAATGATTTCGGGTGGCGACAGAACTGGCCAGGTCAGTACAAGGACTGGTCCTTCGCCA 240 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 208 ATAACGATTTCGGGTGGCGACAGAACTGGCCAGGCCAGTACAAGGACTGGTCCTTCGCCA 267 Query 241 TTTCGCTATTCCACACCTTCTTCCACTGCCACTTCCGTACAGGGTATGGACGCGTGGATA 300 |||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct 268 TTTCACTATTCCACACCTACTTCTACTGCCACTTCCGTACAGCGTATGGACGCGTGGATA 327 Query 301 AGAAGCTAGTTGTGTCGTGGGACCTAAAAGACCG-GTGTGGGGACAGGACCAAATGCACT 359 || ||||||| | ||| ||||| ||||| | | |||||||||||||| ||||||||| Sbjct 328 AGCAGCTAGTAGCGTCATGGGAGTTAAAACAA-GAGTGTGGGGACAGGAGAAAATGCACT 386 Query 360 TGGGTCGTTAAGAAGGACGGACTCTACTTGAGA-AGATGGAAGACCATATTTTTTAGTAA 418 ||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| Sbjct 387 TGGGTCGTTAAGAAGGACGGACTCTACTTGAGACA-ATGGAAGACCAAATTTTTTAGTAA 445 Query 419 CAAGTATGGTAATGAAAGGTGGAATGACTATATTCCACATGATGTCCTCGAGAACCGTTG 478 |||||||||||| ||||||||||||| |||||| ||||||||||||| |||| |||| Sbjct 446 CAAGTATGGTAACGAAAGGTGGAATGTGTATATTGAACATGATGTCCTCAAGAAAAGTTG 505 Query 479 GAGCTAATTAATAATTT 495 ||||||||||| ||||| Sbjct 506 GAGCTAATTAACAATTT 522 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24112390560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5