BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg942218
Length=1028
Score E
Sequences producing significant alignments: (Bits) Value
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:92260... 1140 0.0
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:92087... 859 0.0
AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:92293... 815 0.0
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:92004... 808 0.0
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:14171... 660 0.0
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:92383... 568 5e-161
AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:14274... 520 1e-146
AT5G26286.1 | Symbols: | pseudogene, hypothetical protein | ch... 89.8 5e-17
> AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:9226079-9227873
FORWARD LENGTH=1002
Length=1002
Score = 1140 bits (617), Expect = 0.0
Identities = 841/944 (89%), Gaps = 36/944 (4%)
Strand=Plus/Plus
Query 71 CAGAGGAATAGAGTACAACAGTTCTTACAGTCTCACGACGAATCTTGGACTGACAAGAGT 130
|||||||||||| |||||||||||| ||||| | | ||||| |||| ||||||||||
Sbjct 85 CAGAGGAATAGAATACAACAGTTCTCACAGT-T--C-ACGAA---TGGAGTGACAAGAGT 137
Query 131 GTGGAGGGATGAGCC-ACCAGCGGATAAGATTCTGTCAATAACAAGCTTCTCAATAATTA 189
|||||||||||| || |||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct 138 GTGGAGGGATGA-CCGACCATCGGATAAGATTCTTTCGATAACCAGCTTCTCAATAATTA 196
Query 190 GGAGC-ATA-ATGGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGAG 247
||| | | | | | |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 197 GGA-CGAGACCT-GAACCCTATGAATCCTCTGTTTTTGAGGCTGTTGGTTACAAATGGAG 254
Query 248 ATTGGTTTTGTACACGAATGGTAAACAAGACGACGGTGGAAAAGATCATGTTTCACTTTA 307
||||||||||||| ||||||||| || | |||||||||||||||||||||||||||||
Sbjct 255 ATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAAAGATCATGTTTCACTTTA 314
Query 308 CGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGTGAATGTTGATCTCAA 367
||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 315 CGCGAAGATCGTAGAGACAGAATCTCTTCCAGTAGGATGGGAAGTGAATGTTGATCTCAA 374
Query 368 ACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAGATGGATTAGTGAA 427
|||||||||||||||||| |||| |||||||||||||| |||||||| | | | ||
Sbjct 375 ACTCTTTGTCTACAATGGAAAGCTAAACAAATATTTGATTGTTACAG-T-G---A---AA 426
Query 428 GCGATACAACAATGCTAAAAAAGAGTTGGGATT-CGGACAACTAATTCCTCAATCAAC-T 485
|||||||||||||| | |||||||||||| || ||||||||| |||||||||||||| |
Sbjct 427 -CGATACAACAATGCGACAAAAGAGTTGGG-TTACGGACAACTTATTCCTCAATCAACAT 484
Query 486 TACTACGACGGGAACGATGGATTCCGTGAGCAGGACACTGGTACTTTTGGTGCCGAGATC 545
| |||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||||
Sbjct 485 T-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGTACATTTGGTGCTGAGATC 543
Query 546 TCCATCGTT-AACCGGTCCAACCTAAAAGAGAAAGTCACATTCATATCAAACCCTCCAGA 604
| ||||||| |||| | |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 544 TACATCGTTAAACCAGCCCAA-CAAAAAGAGAAAGTCACATTCATATCAAACCCTCCAGA 602
Query 605 CAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAATCTATAAATC 664
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 603 CAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAGTCTATCAGTC 662
Query 665 TGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAACCCGAAAGGAGGTTT 724
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 663 TAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTAAACCCGAAAGGAGGCTT 722
Query 725 AGTCCCAATCTATT-TATATGCTCAAGGATTTAAGGCAAACGCAGTTGA-AGCAACCACT 782
||||||||||| | ||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct 723 AGTCCCAATCT-TCCTATATGCTCAAGGCTTTAAGGCAAACGCAGTTGTTA-CAACCACT 780
Query 783 TATGGAGC-AGCTAATCTGCGGTTAAAGAATCAACGAAACACCAACCACATAACATCATT 841
|||| ||| | ||||||||||||||||||||||||||| || ||||||| ||||| |||
Sbjct 781 TATGCAGCGA-CTAATCTGCGGTTAAAGAATCAACGAAGCAGCAACCACGTAACAACATA 839
Query 842 TACTGAATATTGGTACCTGGTTCTAAGCGGAT-ACGGTTTGGGAGTGAATACTATACCAT 900
||||| ||||||||||||| ||| |||||||| | |||||||||||||| |||||||| |
Sbjct 840 TACTGCATATTGGTACCTGATTCCAAGCGGATTA-GGTTTGGGAGTGAACACTATACCGT 898
Query 901 TAGCAGATGTAAAGGATGCATCGAAAGGATATTTGGTGAATGATGCCATTATAATTGAAG 960
|| |||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct 899 TATCAGATGTAAAAGATGCATCGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAG 958
Query 961 CTGAAATGCTTACGGTCTCTGTGACGAACCTCGTCTCCGTTTAA 1004
|||||||||||||||||| ||||||||| | || |||| ||||
Sbjct 959 TTGAAATGCTTACGGTCTCGGTGACGAACATTGTATCCGCTTAA 1002
> AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:9208711-9210572
FORWARD LENGTH=1235
Length=1235
Score = 859 bits (465), Expect = 0.0
Identities = 828/996 (83%), Gaps = 53/996 (5%)
Strand=Plus/Plus
Query 62 CACAGAA-GGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTC-ACGACGAATCTTGGA 119
|||| || |||||||||||||||||||||||||||||||||||| | || ||||||||||
Sbjct 103 CACA-AAGGGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTCGAGGA-GAATCTTGGA 160
Query 120 CTGACAAGAGTGTGGAGGGATGAGCCACCAGCGGA-TAAGATTCTGTCAATAACAAGCTT 178
||||||||| || ||| || |||| |||| | || |||||| || |||||||||||||
Sbjct 161 GTGACAAGAGAGTTGAGAGAAGAGCGACCATC-GAGTAAGATAGTGACAATAACAAGCTT 219
Query 179 CTCAATAATT-AGGAGCATAATG-GCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGT 236
|||| | ||| | | ||| | | | |||||||| |||||||||||||||||||||||||
Sbjct 220 CTCAGTGATTAAAG-GCA-GAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTGGT 277
Query 237 TACAAATGGAGATTGGTTTTGTACACGAATGGTAA-ACAAGACGACGGTGGAAAAGATCA 295
|||||||||||||||||||||||| ||||||||| | || ||||||||||||| |||||
Sbjct 278 TACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAA-ACGACGGTGGAAATGATCA 336
Query 296 TGTTTCACTTTACGCGAGGATCGTAGAGACAGAA-TCTCTTCCAATAGGCTGGGAAGTGA 354
| |||| |||||||| ||||||| ||||||| || ||||||||| |||| ||||||||||
Sbjct 337 TATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTGA 395
Query 355 ATGTTGATCTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAG 414
||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||
Sbjct 396 ATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACAG 455
Query 415 ATGGATTAGTGAAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAATTC 474
|||| |||||||||||||| |||||||| |||||||| | ||| ||||||||| | ||||
Sbjct 456 ATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATTC 515
Query 475 CTCAATCAAC-TTACTACGACGGGAACGATGGATT-CCGTGAGCAGGACACTGGTACTTT 532
||| |||||| || |||| ||| |||||| || || || ||| |||||||||||| ||||
Sbjct 516 CTCGATCAACATT-CTACAACGCGAACGAAGG-TTACCTTGACCAGGACACTGGTTCTTT 573
Query 533 TGGTGCCGAGATCTCCATCGTTAA-CCGG-TCCAACCTAA-AAGAGAAAGTCACATTCAT 589
|||||| ||||||| || ||||| |||| || ||| || |||||||||| ||||||||
Sbjct 574 TGGTGCTGAGATCTTTATTGTTAAACCGGCTC-AAC--AACAAGAGAAAGTTACATTCAT 630
Query 590 ATCAAACCCTCCAGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 649
||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
Query 650 TAAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAA 709
|||| ||||| | || || || ||||| |||| |||||||||||||| | ||||||||||
Sbjct 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
Query 710 CCCGAAAGG--A-GGTTTAGTC---CCA-AT-C--T---A-T-TTA-TAT--GCTCAAGG 751
||||||||| | || || ||| || | | | | || ||| ||||||||
Sbjct 751 CCCGAAAGGGGATGGAGGAGGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAAGG 810
Query 752 ATTTAAGGCAAACGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAGA 810
||||||||| ||||||| | ||| ||||| ||||| | |||||||||||||||||
Sbjct 811 CCATAAGGCAAATGCAGTTGCTA-CAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGA 869
Query 811 ATCAACGAAACACCAACCACATA-ACATCAT-TTACTGAATATTGGTACCTGGTTCTAAG 868
||||||||| || ||||| | | | || || || ||| | |||||||| | || |||
Sbjct 870 ATCAACGAAGTACTAACCATAGACAAAT-ATATT-CTGCAGCTTGGTACCCGATTGGAAG 927
Query 869 CGGATACGGTTTGGGAGTGAATACTAT-AC-CA-TTAGCAGATGTAAAGGATGCATCGAA 925
||| || ||| |||||||||| | ||| | | ||||| ||| |||| |||||||| ||
Sbjct 928 CGGTTATGGTGTGGGAGTGAACAATATCATACTGTTAGCTGATTTAAACGATGCATCAAA 987
Query 926 AGGATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGTGAC 985
||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| | ||
Sbjct 988 AGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAAC 1047
Query 986 GAACCTCGTCTCCGTTTAAAGATCT-CTACTTCTTT 1020
||| ||||||||| ||||| |||| | ||||||||
Sbjct 1048 CAACATCGTCTCCGCTTAAATATCTGC-ACTTCTTT 1082
> AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:9229326-9231033
FORWARD LENGTH=1050
Length=1050
Score = 815 bits (441), Expect = 0.0
Identities = 804/972 (83%), Gaps = 54/972 (6%)
Strand=Plus/Plus
Query 62 CACAGAAGGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTC-ACGACGAATCTTGGAC 120
||||| ||||||||| ||||||||||||||||||||||||| | || |||| |||||
Sbjct 90 CACAGGGGGCAGAGGAGCAGAGTACAACAGTTCTTACAGTCTCAAGGA-GAATTTTGGAG 148
Query 121 TGACAAGAGTGTGGAGGGATGAGCCACCAGCGGA-TAAGATTCTGTCAATAACAAGCTTC 179
||||||||||| ||| ||||||| |||| | || |||||||||| ||||||||| ||||
Sbjct 149 GGACAAGAGTGTTGAGAGATGAGCGACCATC-GAGTAAGATTCTGACAATAACAAACTTC 207
Query 180 TCAATAATT-AGGAGCATAATGGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTA 238
|| | ||| ||| ||| | | | |||||||| |||||||||||||||||||||||||||
Sbjct 208 TCTGTGATTAAGG-GCAGAGTAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTGGTTA 266
Query 239 CAAATGGAGATTGGTTTTGTACACGAATGGTAAAC-AAGACGACGGTGGAAAAGATCATG 297
|||||||||||||||||||||| ||||||||| | || ||||| ||||||| ||||||
Sbjct 267 CAAATGGAGATTGGTTTTGTACGTGAATGGTAATCCAA-ACGACAGTGGAAATGATCATA 325
Query 298 TTTCACTTTACGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGTGAATG 357
|||||||||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||
Sbjct 326 TTTCACTTTACGTGAGGATCGAAGAGACAGAATATCTTCCAAGAGGGTGGGAAGTGAATG 385
Query 358 TTGATCTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAGATG 417
||||||||||||||||| || |||||||||||| ||||||||||||| || || ||||||
Sbjct 386 TTGATCTCAAACTCTTTATCCACAATGGGAAGCTAAACAAATATTTGGCTATTTCAGATG 445
Query 418 GATTAGTGAAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAATTCCTC 477
|| | ||||| ||||||| |||| |||| ||||| ||||||||||||||| |||||||
Sbjct 446 GAACATTGAAGTTATACAACGATGCGAAAAGAGAGTGGGGATTCGGACAACTTATTCCTC 505
Query 478 AA-TCAAC-TTACTACGACGGGAACG-ATGGATTCCGTGAGCAGGACACTGGTACTTTTG 534
| | ||| || |||| || | || |||| | | ||||||||||| |||| ||||||
Sbjct 506 ACGT-AACATT-CTACAAC---A-CGTATGGGTACATTGAGCAGGACATTGGTTCTTTTG 559
Query 535 GTGCCGAGATCTCCATCGTTAA-CCGG-TCCAACCTAA-AAGAGAAAGTCACATTCATAT 591
|||| ||||||| ||||||||| |||| || ||| || |||||||||||||||||||||
Sbjct 560 GTGCTGAGATCTTCATCGTTAAACCGGCTC-AAC--AACAAGAGAAAGTCACATTCATAT 616
Query 592 CAAACCCTCCAGAC-AATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGAT 650
||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 617 CAAACCCTCCA-ACCAATGTTTTCACTTGGAAGATACTTCATTTCTCTATCTTGGAAGAC 675
Query 651 AAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAAC 710
|| ||||| | |||||||| ||||| |||| |||||||||||||| | |||||||||||
Sbjct 676 AAGTTCTATTACTCTGACGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAAC 735
Query 711 CC----G-A-A---AGGAGGTT-----TA-GT-C--CCAATCTATT-TATATGCTCAAGG 751
|| | | | |||||| || | | ||||||| || ||| |||||||||
Sbjct 736 CCTAAAGGAGATGGAGGAGGAAGACCATATGCACTTCCAATCT-TTCTATTTGCTCAAGG 794
Query 752 ATTTAAGGCAAACGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAGA 810
||||||||||||||||| | ||| ||||| ||||| |||||||||||| ||||||
Sbjct 795 CCATAAGGCAAACGCAGTTGCTA-CAAACACTTGGGGAGCGGCTAATCTGCGGCTAAAGA 853
Query 811 ATCAACGAAACACCAACCACATA-ACATCATTTACTGAATATTGGTACCTGGTTCTAAGC 869
||||||||| ||||||||||| | | || || ||||| | |||||||| | || ||||
Sbjct 854 ATCAACGAAGCACCAACCACAGACAAAT-ATATACTGCAGCTTGGTACCCGATTGGAAGC 912
Query 870 GGATACGGTTTGGGAGTGAATACTAT-ACCATT---AGCAGATGTAAAGGATGCATCGAA 925
|| || ||| |||||||||| | ||| | ||| ||||||| |||| ||||||||| |
Sbjct 913 GGTTATGGTGTGGGAGTGAACAATATCAT-ATTGTTAGCAGATTTAAACGATGCATCGCA 971
Query 926 AGGATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGTGAC 985
|||||||||||||||| |||||||||| ||||||||| |||| ||| ||| || |||||
Sbjct 972 AGGATATTTGGTGAATAATGCCATTATCTTTGAAGCTGCAATGGTTAAGGTTTCAGTGAC 1031
Query 986 GAACCTCGTCTC 997
||| |||||||
Sbjct 1032 CAACATCGTCTC 1043
> AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:9200463-9202400
FORWARD LENGTH=1332
Length=1332
Score = 808 bits (437), Expect = 0.0
Identities = 820/998 (82%), Gaps = 54/998 (5%)
Strand=Plus/Plus
Query 62 CACAGAAGGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTCACGACGAATCTTGGACT 121
|||| | |||||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct 119 CACACAGGGCAGAGGAATAGAGTACAACAACTCTTACAGTCTCACGTCGAATCTTGGAGT 178
Query 122 ---GACAAGAGTGTGGAGGGATGAGCCACCAGCGGA-TAAGATTCTGTCAATAACAAGCT 177
|||||||| || ||| || |||| |||| | | |||||| || |||| |||||||
Sbjct 179 GACGACAAGAGAGTTGAGAGACGAGCGACCATC-AAGTAAGATAGTGACAATCACAAGCT 237
Query 178 TCTCAATAATT-AGGAGCATAATG-GCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGG 235
|||| | ||| |||| || | | | |||||||| ||| ||| ||||||||||||| ||
Sbjct 238 TCTCTGTGATTAAGGA-CA-GAGGAGAACCCTATGAATCATCTATTTTTGAGGCTGCCGG 295
Query 236 TTACAAATGGAGATTGGTTTTGTACACGAATGGTAA-AC-AAGACGACGGTGGAAA-AGA 292
||||||||||||||| ||||||||| ||| ||||| | || | | |||| ||| | |
Sbjct 296 TTACAAATGGAGATTAGTTTTGTACGTGAAGGGTAATCCGAA-A-GGCGGTATAAATA-A 352
Query 293 TCATGTTTCACTTTACGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGT 352
|||| ||||||||||||||||||| | |||||||||| ||||||||| ||| ||||||||
Sbjct 353 TCATATTTCACTTTACGCGAGGATAGAAGAGACAGAAACTCTTCCAAGAGGGTGGGAAGT 412
Query 353 GAATGTTGATCTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTAC 412
||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| |||||||
Sbjct 413 GAATGTTGATCTCAAACTCTTTGTCCACAATCGGAAGTTAAAGAAATATTTGTCTGTTAC 472
Query 413 AGATGGATTAGTGAAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAAT 472
||||||| |||||||||||||||| |||| |||||||||| ||||||| |||| | ||
Sbjct 473 AGATGGAACAGTGAAGCGATACAACGATGCAAAAAAAGAGTGGGGATTCACACAATTGAT 532
Query 473 TCCTCAAT-CAAC-TTACTACGACGGGAACGATGGATTCCGTGAGCAGGACACTGGTACT 530
| ||| | |||| || |||| ||| |||||| || | || || ||||||||| | | ||
Sbjct 533 TTCTC-TTCCAACATT-CTACAACGCGAACGAAGGGTACCTTGTGCAGGACACAGCTTCT 590
Query 531 TTTGGTGCCGAGATCTCCATCGTTAACCGGTCCA-ACCTAA-AAGAGAAAGTCACATTCA 588
|||||||| ||||||| ||||||||||| | || | || ||||||||||||||||||
Sbjct 591 TTTGGTGCTGAGATCTTCATCGTTAACCCG-ACAGA-AAAACAAGAGAAAGTCACATTCA 648
Query 589 TATCAAACCCTCCAGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAG 648
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 649 TATCAAACCCTCCAGACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAG 708
Query 649 ATAAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTA 708
||||| ||||| | ||||| || ||||||||||||||||||||||||| | |||||||||
Sbjct 709 ATAAATTCTATTACTCTGATGATTTTCTTGTTGGAGACCGATACTGGAGACTAGGATTTA 768
Query 709 ACCCGAAAGGA---GGTTTAGTC---CCA-AT-C--T---A-T-TT---ATATGCTCAAG 750
||||||||||| ||| || ||| || | | | | || |||||||||||
Sbjct 769 ACCCGAAAGGATCTGGTGGAGGAAGACCACATGCACTTCCAATCTTCCTATATGCTCAAG 828
Query 751 GATTTAAGGCAAACGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAG 809
| ||||||||||||||||| | ||| ||||| ||||| | ||||||||||||||||
Sbjct 829 GCCATAAGGCAAACGCAGTTGTTA-CAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 887
Query 810 AATCAACGAAACACCAACCACATAACA-TCAT-TTACTGAATATTGGTACCTGGTTCTAA 867
|||||||||| | ||||||||| |||| | || || ||| | |||||||| | ||| ||
Sbjct 888 AATCAACGAAGCTCCAACCACA-AACAATTATATT-CTGCAGCTTGGTACCCGATTCGAA 945
Query 868 GCGGAT-ACGGTTTGGGAGTGAATACTATACCATT-A-G-CAGATG-TAAAGGATGCATC 922
||| || | ||| |||||||||| | |||| ||| | | |||| | |||| ||||||||
Sbjct 946 GCG-ATTATGGTGTGGGAGTGAACAATATAATATTGATGTCAGA-GCTAAAAGATGCATC 1003
Query 923 GAAAGGATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGT 982
||||| ||| ||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct 1004 AAAAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTGT 1063
Query 983 GACGAACCTCGTCTCCGTTTAAAGATCTCTACTTCTTT 1020
||| ||| | ||||||||||||| ||| ||||||||||
Sbjct 1064 GACAAACATAGTCTCCGTTTAAATATCACTACTTCTTT 1101
> AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:1417182-1419247
REVERSE LENGTH=1576
Length=1576
Score = 660 bits (357), Expect = 0.0
Identities = 748/930 (80%), Gaps = 54/930 (6%)
Strand=Plus/Plus
Query 130 TGTGGAGGGATGAGCCACCAGCGGATAAGATTCTGTCAATAACAAGCTTCTCAATAAT-- 187
||||||| ||||||| |||| | | ||||| ||| |||||||||| ||||| | ||
Sbjct 459 TGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGTGATCA 518
Query 188 TA-GGAGCATAATGGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTACAAATGGA 246
| |||| | | | |||||| | |||||| || |||||||| | ||||||||||||||
Sbjct 519 AAGGGAG-AGGA--GAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAATGGA 575
Query 247 GATTGGTTTTGTACACGAATGGTAAACAAGACGACGGTGGAAA-AGATCATGTTTCACTT 305
|||| |||||||| |||||||| ||| |||| |||||||| | | ||| ||||||||
Sbjct 576 GATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATA-ACCATATTTCACTT 634
Query 306 TACGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGTGAATGTTGATCTC 365
|||| |||||||| |||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct 635 TACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAACTC 694
Query 366 AAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTACAGATGGATTAGTG 425
||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||
Sbjct 695 AAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAGTG 754
Query 426 AAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAACTAATTCCTCAAT-CAAC 484
|| |||||||| |||| |||||||||| ||||| |||| || | ||||||| | ||||
Sbjct 755 AAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTC-TTACAAC 813
Query 485 -TTACTACGACGGGAACGATGGATT-CCGTGAGCAGGACACTGGTACTTTTGGTGCCGAG 542
|| || ||| |||||| || || | ||||||||||| || | |||||||||| |||
Sbjct 814 ATTCCT-TGACACGAACGAAGG-TTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAG 871
Query 543 ATCTCCATCGTTA-ACCGGTCCAACCTAAAAGAGAAAGTCACATTCATATCAAACCCTCC 601
|||| || || | | |||||||| || |||||||||||||||||||||| ||||||||
Sbjct 872 ATCTTCAGCGGCACAGCGGTCCAA-GTACAAGAGAAAGTCACATTCATATCCAACCCTCC 930
Query 602 AGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAAATCTATAA 661
| ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |
Sbjct 931 AAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTA 990
Query 662 ATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTTAACCCGAAAGG-A- 719
||||| || |||||||||| ||||||||| |||| ||||||||||||||| ||||| |
Sbjct 991 CTCTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTAC 1050
Query 720 -GGTT-T--A-G-TCCCAATC--T---A-T-TT---ATATGCTCAAGGATTTAAGGCAAA 763
||| | | | || ||| | | | | || |||||||||||| |||| ||||
Sbjct 1051 TGGTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAA 1110
Query 764 CGCAGTTGA-AGCAACCACTTATGGAGCAGCTAATCTGCGGTTAAAGAATCAACGAAACA 822
|||||||| | ||| ||||| ||||| | |||||||||||||||||||||||||| |
Sbjct 1111 CGCAGTTGCTA-CAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCT 1169
Query 823 CCAACCAC--ATAACATCAT-TTACTGAATATTGGTACC-TGGTTCTAAGCGGAT-ACGG 877
|||||||| | || || || || ||| | |||||||| | | | ||||| || | ||
Sbjct 1170 CCAACCACGCACAA-AT-ATATT-CTGCAGCTTGGTACCCTACT-CGAAGCG-ATTATGG 1224
Query 878 TTTGGGAGTGAATACTAT-AC--CATTAGCAGA-TGTAAAGGATGCATCGAAAGGATATT 933
| ||||||| || ||||| | | |||||||| | | || |||||||||||||| ||||
Sbjct 1225 TGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCATCGAAAGGGTATT 1283
Query 934 TGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGGTCTCTGTGACGAACCTCG 993
|||||||||| ||||||| |||||||||||||| | | |||||||||||| ||| | |
Sbjct 1284 CGGTGAATGATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTG 1343
Query 994 TCTCCG-TTTAAAGATCTCTACTTCTTTAC 1022
| ||| |||||| ||||||| |||| |||
Sbjct 1344 T-TCCCATTTAAATATCTCTA-TTCTCTAC 1371
> AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:9238310-9241236
FORWARD LENGTH=1059
Length=1059
Score = 568 bits (307), Expect = 5e-161
Identities = 766/976 (78%), Gaps = 77/976 (8%)
Strand=Plus/Plus
Query 62 CACAGAAGGCAGAGGAATAGAGTACAACAGTTCTTACAGTCTCACGACGAATCTTGGACT 121
|||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct 90 CACAGAGGGCAGAGGAATAGAGTACAACAATTCTTATAGTCTCAAGACGAATCTTGGACT 149
Query 122 GACAAGAGTGTGGAGGGATGAGCCACCAGCGGA-TAAGATTCTGTCAATAACAAGCTTCT 180
|||||| || | ||| || |||| |||| | || |||||| || |||||||||||||||
Sbjct 150 GACAAGGGTATTGAGAGAAGAGCGACCATC-GAGTAAGATAGTGACAATAACAAGCTTCT 208
Query 181 CAATAATT-AGGAGCATAAT-GGCACCCTATGTATCCTCTGTTTTTGAGGCTGCTGGTTA 238
| | ||| ||| ||| || | | ||| || ||||||| ||||||||||||||||||
Sbjct 209 CCGTGATTAAGG-GCA-GATCTGAAGCCTTTGAATCCTCTACTTTTGAGGCTGCTGGTTA 266
Query 239 CAAATGGAGATTGGTTTTGTACACGAATGGTAAACAAGACGAC---G--G-TGGAAAAGA 292
|||||||||||| | |||| | ||||||||| ||| ||||| | | |||| | ||
Sbjct 267 CAAATGGAGATTTATGTTGTTCGTGAATGGTAATCAAAACGACCCCGATGGTGGACATGA 326
Query 293 TCATGTTTCACTTTACGCGAGGATCGTAGAGACAGAATCTCTTCCAATAGGCTGGGAAGT 352
|| | ||||||||| | ||||| |||||| |||||| |||||| ||||||||||||
Sbjct 327 AAATATGGCACTTTACGTGGGGATCAAAGAGACCGAATCTTTTCCAAGAGGCTGGGAAGT 386
Query 353 GAATGTTGATCTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTGTTAC 412
|||||||||||||||||||||||| |||||| ||||| | |||| || ||||||||| |
Sbjct 387 CAATGTTGATCTCAAACTCTTTGTCCACAATGAGAAGCTACACAAGTACTTGACTGTTTC 446
Query 413 AGATGGATTAGTGAAGCGATAC-AA-CAATGCTAAAAAAGAGTTGGG-ATTCGGACAACT 469
||||||| ||||||||| ||| || | ||| |||| | | ||||| ||||||| ||||
Sbjct 447 AGATGGAACAGTGAAGCGGTACGAAGC--TGCGAAAACATA-TTGGGGATTCGGA-AACT 502
Query 470 A-ATTCCTCA-ATCAAC-TTACTACGACGGGAACGATGGATTCCGTGA-GCAGGACAC-T 524
|| |||| | |||| || || ||| ||||| || || | | ||| || || |
Sbjct 503 TGATCCCTCGTA-CAACATTGCTT-GACCCAAACGAAGG-TTACATCTTGCATGATACCT 559
Query 525 GGTACTTTTGGTGCCGAGATCTCCATCGTTAA-CCGGTCC-AACCTAA-AAGAGAAAGTC 581
| |||||||||| ||||| ||||||||||| || | || || || |||||||| ||
Sbjct 560 TAT-CTTTTGGTGCTGAGATATCCATCGTTAATCCAG-CCGAAA--AACAAGAGAAAATC 615
Query 582 ACATTCATATCAAACCCTCCAGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACC 641
|||||||||||||||||||| |||||| | ||||||||||||||||||| |||||| |||
Sbjct 616 ACATTCATATCAAACCCTCCGGACAATGTCTTCACTTGGAAGATACTTCGTTTCTCCACC 675
Query 642 TTGGAAGATAAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTA 701
|||||| |||| ||||| | |||||||| ||||| ||||||||||||||||||| ||||
Sbjct 676 TTGGAAAATAAGTTCTATTACTCTGACGAATTTCTCGTTGGAGACCGATACTGGAGATTA 735
Query 702 GGATTTAACCCGAAAGG--A----GGTTTA-G------T-C-C---CAATCTATT-TATA 742
||||||||||||||||| | || | | | | | |||||| || ||||
Sbjct 736 GGATTTAACCCGAAAGGGTATCAAGGAGAAAGACCACGTGCACTTTCAATCT-TTCTATA 794
Query 743 TGCTCAAGGATTTAAGGCAAACGCAGTTGA--AGCAACCACTTATGGAGCAGCTAATCTG 800
||||||||| | |||||||||||||||| | | ||| ||||| ||| | | |||||||
Sbjct 795 TGCTCAAGGCTATAAGGCAAACGCAGTT-ATTA-CAAACACTTGGGGATCGGTTAATCTG 852
Query 801 CGGTTAAAGAATCAACGAAACACCAACCACAT--AACATCATTTACTGAATATTGGTACC 858
| ||||||||||||||||| | |||||||||| ||| | || || |||| |||||
Sbjct 853 CAGTTAAAGAATCAACGAAGCTCCAACCACATTCAAC-T-ATATAGTGAAGCTTGGTG-- 908
Query 859 TG-G-TTCTAAGCGGATACGGT-TTGGGAGTGAATACTAT-ACCATT---AGCAGATGTA 911
|| | ||| |||||| || ||| ||| || ||| | ||| | ||| || |||| ||
Sbjct 909 TGCGATTCGAAGCGGTTATGGTATTGA-AGGGAACAGTATCAT-ATTGTTAGAAGATTTA 966
Query 912 -AAGGATGCATCGAAAGGATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAAT-GC 969
|| || |||| ||||||||||||||||||||||| ||||| ||||||||||| | |
Sbjct 967 CAAA-ATTCATCAAAAGGATATTTGGTGAATGATGCAATTATCTTTGAAGCTGAACTTG- 1024
Query 970 TTACGGTCTCTGTGAC 985
||| ||||||||||||
Sbjct 1025 TTAAGGTCTCTGTGAC 1040
> AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:1427481-1430342
REVERSE LENGTH=1461
Length=1461
Score = 520 bits (281), Expect = 1e-146
Identities = 733/942 (78%), Gaps = 68/942 (7%)
Strand=Plus/Plus
Query 121 TGACAAGAGTGTGGAGGGATGAGCCACCAGCGGATAAGATTCTGTCAATAACAAGCTTCT 180
|||||||| || || |||||||||||| | ||| ||| ||| ||||||||| ||||
Sbjct 441 TGACAAGAACGTTAAGAGATGAGCCACCATCACATAGGATACTGACAATAACAAATTTCT 500
Query 181 -C-A-ATAATTAGGAGCATAATGGCACCCTATGTATCCTCTGTTTTTGAGGC---TGCTG 234
| | || ||| |||| | || | |||||| | |||||||||||||||||| | ||
Sbjct 501 CCGAGATTATTGGGAG-AGAA--GAACCCTACGAATCCTCTGTTTTTGAGGCTTATTTTG 557
Query 235 GTTACAAATGGAGATTGGTTTTGTACACGAATGGTAAACAAGACGACGGTGGAA-AAGAT 293
|||||||||||||| |||||||| ||||||||| ||| |||| ||||||| | ||
Sbjct 558 AACACAAATGGAGATTGATTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAGTA-AT 616
Query 294 CATGTTTCACTTTACGCGAGGAT-CGTAGAGACAGAATC-TCTTCCAATAGGCTGGGAAG 351
||| | ||||||||| |||| | || |||||||| ||| |||| | ||| | | || ||
Sbjct 617 CATATCTCACTTTACTTGAGG-TCCGAAGAGACAG-ATCATCTTAC-ATACGAT-GGTAG 672
Query 352 --TGAATGTTGAT-CTCAAACTCTTTGTCTACAATGGGAAGCAAAACAAATATTTGACTG 408
| ||| ||| | |||||||||||||||||||||||||| ||| |||| ||| ||||||
Sbjct 673 TATCAATTTTG-TACTCAAACTCTTTGTCTACAATGGGAAACAAGACAAGTATCTGACTG 731
Query 409 TTACAGATGGATTAGTGAAGCGATACAACAATGCTAAAAAAGAGTTGGGATTCGGACAAC 468
||||||||||| || ||| ||||||||| || || ||||||| ||||| |||| ||
Sbjct 732 TTACAGATGGAATACAGAAACGATACAACTATAAGAATAAAGAGTGGGGATACGGAAAAT 791
Query 469 TAATTCCTCAATCAAC-TTACTACGACGGGAACGATGGATT-CCGTGAGCAGGACACTGG 526
| ||||||| ||||| || || ||| || | | || || || |||||| |||||||
Sbjct 792 TGATTCCTCTTTCAACATTCCT-TGACACGAGCCAAGG-TTACCTTGAGCAAGACACTGC 849
Query 527 TACTTTTGGTGCCGAGATC-TCCATCGTTAACCGGTCCAACCTAAAAGAGAAAGTCACAT 585
| |||||||||| |||||| | | | || |||| | | | || |||||||||||||||
Sbjct 850 TTCTTTTGGTGCTGAGATCTTTCTTTGTCCACCGATTC-AGGTACAAGAGAAAGTCACAT 908
Query 586 TCATATCAAACCCTCCAGACAATATTTTCACTTGGAAGATACTTCATTTCTCTACCTTGG 645
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 909 TCATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACGTTGG 968
Query 646 AAGATAAAATCTATAAATCTGACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGAT 705
| |||| | ||||| | ||||| || ||||| |||| |||||||||||||| |||||||
Sbjct 969 AGGATATAGTCTATTACTCTGATGATTTTCTGGTTGAAGACCGATACTGGAGATTAGGAG 1028
Query 706 TTAACCCGAAAGG-A--GGTT-T--A-G-TC-C---CAATCTA--T-TT---ATATGCTC 747
||||||| ||||| | || | | | || | ||||| | | || ||||||||
Sbjct 1029 TTAACCCTAAAGGTACCGGAGATGGAAGATCACAAGCAATCAAAATCTTCCTATATGCTC 1088
Query 748 AAGGATT-TAAGGCAAACGCAGTTGAAGCAACCACTTATGGAGCAGCTAATCTGCGGTTA 806
|||| | |||| |||| ||||||| || |||||| ||||| | |||||||||| ||
Sbjct 1089 AAGG-TCATAAGCCAAATGCAGTTGTTTCATCCACTTGGGGAGCCGTTAATCTGCGGGTA 1147
Query 807 AAGAATCAACGAAACACCAACCACATAACA--TCAT-TTACTGAATATTGGTACC-TGGT 862
||||||||||||| | |||| ||| | ||| | || || ||| | || ||||| | |
Sbjct 1148 AAGAATCAACGAAGCTCCAATCAC-TCACAAAT-ATATT-CTGCAGCTTTGTACCCTA-T 1203
Query 863 TCTAAGCGGAT-ACGGTTTGGGAGTGAATACT--AT-ACCATTAGCAGA-TGTAAAGGAT 917
|| || || || | ||| ||||||| || ||| || | |||||||||| | |||| |||
Sbjct 1204 TCGAAACG-ATTATGGTGTGGGAGTTAACACTGTATTATCATTAGCAGAAT-TAAATGAT 1261
Query 918 GCA-TCGAAAG-GATATTTGGTGAATGATGCCATTATAATTGAAGCTGAAATGCTTACGG 975
||| | ||||| | ||||||||||||||| ||||||| |||||||||||||| | | ||
Sbjct 1262 GCAGT-GAAAGAG-TATTTGGTGAATGATTCCATTATCTTTGAAGCTGAAATGGTGAAGG 1319
Query 976 TCTCTGTGACGAACCTCGTCTCCG-TTTAAAGATCTCTACTT 1016
|||||||||| ||| |||| ||| |||||| ||||||||||
Sbjct 1320 TCTCTGTGACCAACATCGT-TCCTATTTAAATATCTCTACTT 1360
> AT5G26286.1 | Symbols: | pseudogene, hypothetical protein |
chr5:9220057-9221658 FORWARD LENGTH=1602
Length=1602
Score = 89.8 bits (48), Expect = 5e-17
Identities = 77/91 (85%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 900 TTAGCAGATGTAAAGGATGCATCGAAAGGATATTTGGTGAATGATGCCATTATAATTGAA 959
|||| |||| |||| || |||| ||||||||||||||||||||||||||||| |||||
Sbjct 1504 TTAGAAGATTTAAAAAATTCATCAAAAGGATATTTGGTGAATGATGCCATTATCTTTGAA 1563
Query 960 GCTGAAAT-GCTTACGGTCTCTGTGACGAAC 989
|||||| | | ||| ||||| |||||| |||
Sbjct 1564 GCTGAACTTG-TTAAGGTCTTTGTGACCAAC 1593
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50384849441
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5