BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942228 Length=290 Score E Sequences producing significant alignments: (Bits) Value AT5G26717.1 | Symbols: | Putative membrane lipoprotein | chr5:... 368 1e-101 AT5G26692.1 | Symbols: | Putative membrane lipoprotein | chr5:... 355 1e-97 > AT5G26717.1 | Symbols: | Putative membrane lipoprotein | chr5:9284558-9284997 FORWARD LENGTH=440 Length=440 Score = 368 bits (199), Expect = 1e-101 Identities = 255/282 (90%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 1 AAAGAAA-C-TTGTAAGAG-AAAATGACAGGAAACGTGTGTAAGATGATGATGTTGATGG 57 ||||||| | ||| ||||| |||||||| |||||| ||| |||||||||||||||||||| Sbjct 33 AAAGAAATCTTTG-AAGAGAAAAATGACGGGAAACATGTATAAGATGATGATGTTGATGG 91 Query 58 CATTGATAATGATGGCATGTGGTTTACAAGCATGCAATGGAACGAATTTTGATGAATTCA 117 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || Sbjct 92 CATTGATAATGATGGCATGTGGTTTACAAGCATGCAATGCAACGAATGTTGATGAAAGCA 151 Query 118 AGCCAGATTCAAGATTTGTGTGCTTCAAAAACTGTTCTATAAGTTGTGGCAAACAAAACA 177 |||||||| ||| | ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct 152 AGCCAGATCCAAAACTTGAGTGCTTCAAAAACTGTTCCATAAGTTGTGGCAAACAAAACA 211 Query 178 AACCATGTTACCAAGATTGTTTGACGAAATGTGGTCTCCCACAACGACCTTCAAGATCAA 237 |||| |||||| |||||||||||||||||||||||||||||||||| ||||| | ||||| Sbjct 212 AACCTTGTTACGAAGATTGTTTGACGAAATGTGGTCTCCCACAACGTCCTTCTACATCAA 271 Query 238 CACCATCATCTTCCCCCACCGCGGCTTAATCTGTTTCCATTT 279 ||||| |||||||| ||||| |||| |||| |||||||||| Sbjct 272 CACCAGCATCTTCCTCCACCACGGCATAATAAGTTTCCATTT 313 > AT5G26692.1 | Symbols: | Putative membrane lipoprotein | chr5:9282479-9283007 FORWARD LENGTH=529 Length=529 Score = 355 bits (192), Expect = 1e-97 Identities = 254/284 (89%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 1 AAAGAAA-C-TTGTAAGAG-AAAATGACAGGAAACGTGTGTAAGATGATGATGTTGATGG 57 ||||||| | ||| ||||| |||||||| |||||| ||| |||||||||||||||||||| Sbjct 34 AAAGAAATCTTTG-AAGAGAAAAATGACGGGAAACATGTATAAGATGATGATGTTGATGG 92 Query 58 CATTGATAATGATGGCATGTGGTTTACAAGCATGCAATGGAACGAATTTTGATGAATTCA 117 |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| || Sbjct 93 CATTGATAATGATGACATGTGGTTTACAAGCATGCAATGCAACGAATGTTGATGAAAGCA 152 Query 118 AGCCAGATTCAAGATTTGTGTGCTTCAAAAACTGTTCTATAAGTTGTGGCAAACAAAACA 177 |||||||| ||| | ||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 153 AGCCAGATCCAAAACTTGAGTGCTTCAAAAACTGTTCCATAAGTTGTGGCAAACAAAACC 212 Query 178 AACCATGTTACCAAGATTGTTTGACGAAATGTGGTCTCCCACAACGACCTTCAAGATCAA 237 |||| |||||| ||| ||||||||||||||||||||||||| |||| ||||| | ||||| Sbjct 213 AACCTTGTTACGAAGTTTGTTTGACGAAATGTGGTCTCCCAAAACGTCCTTCTACATCAA 272 Query 238 CACCATCATCTTCCCCCACCGCGGCTTAATCTGTTTCCATTTGT 281 |||||||||||||| ||||| |||| |||| |||||||||||| Sbjct 273 CACCATCATCTTCCTCCACCACGGCGTAATAAGTTTCCATTTGT 316 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13371221234 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5