BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg942294

Length=229
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G16120.2 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   257    3e-68


> AT5G16120.2 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:5265633-5267916 FORWARD LENGTH=1438
Length=1438

 Score =  257 bits (139),  Expect = 3e-68
 Identities = 153/160 (96%), Gaps = 0/160 (0%)
 Strand=Plus/Plus

Query  28   AGACACCAGAGACTGGGATTAAGACAAAGGAGTCTTATGAGGTGAATTCGAGAGGAGTTG  87
            |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  381  AGACACCAGAAAATGGGATTAAGACAAAGGAGTCTTTTGAGGTGAATTCGAGAGGAGTTG  440

Query  88   AGATCTTCTCCAAAAGCTGGCTTCCTGAAGCTTCTAGGCCTAGAGCTTTGGTTTGTTTCT  147
            |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  441  AGATTTTCTCTAAAAGCTGGCTTCCTGAAGCTTCTAAGCCTAGAGCTTTGGTTTGTTTCT  500

Query  148  GCCATGGTTATGGAGATACTTGCACGTTTTTCTTCGAAGG  187
            ||||||||||||||||||||||||| ||||||||||||||
Sbjct  501  GCCATGGTTATGGAGATACTTGCACATTTTTCTTCGAAGG  540



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10304888545


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5