BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942472 Length=397 Score E Sequences producing significant alignments: (Bits) Value ATMG00150.1 | Symbols: ORF116 | hypothetical protein | chrM:357... 575 1e-163 > ATMG00150.1 | Symbols: ORF116 | hypothetical protein | chrM:35782-36132 FORWARD LENGTH=351 Length=351 Score = 575 bits (311), Expect = 1e-163 Identities = 326/332 (98%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 46 AACTAGAAGTCAACTCAAAACCGCTAAAAGGACCTATTATTTGCCCTATTAGGACCTATT 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26 AACTAGAAGTCAACTCAAAACCGCTAAAAGGACCTATTATTTGCCCTATTAGGACCTATT 85 Query 106 ATTCTAAAGTACCATTGGAGCTCCTTTTCCCGACAACAGATCGGAGATTTTACTTTCTCA 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATTCTAAAGTACCATTGGAGCTCCTTTTCCCGACAACAGATCGGAGATTTTACTTTCTCA 145 Query 166 AGTCATACGTCTTTTGTTCAGCCAACAGTGTTCCGCTCTACTTATTATTACTTACTAGCG 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 146 AGTCATACGTCTTTTGTTCAGCCAACAGTGTTCCGCTCTACTTATTATTACTTACTAGCG 205 Query 226 CCCTTCACTTCAACTCATACATACTACTTTTTGACTTTCAGCTTATTCCCAAATCAAAGC 285 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 206 CCCTTCACTTCAACTCATACATACTACTTTTTGACTTTCAGCT----C--AAATCAAAGC 259 Query 286 TACTTGCTTATAAGAGAAGAGCAAGGTGCGTAGCTGGCTTGTTAAAAAGCATGGAAAGGT 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TACTTGCTTATAAGAGAAGAGCAAGGTGCGTAGCTGGCTTGTTAAAAAGCATGGAAAGGT 319 Query 346 ATCCAGAAAGCACAGTAACAGCTATGATATAG 377 |||||||||||||||||||||||||||||||| Sbjct 320 ATCCAGAAAGCACAGTAACAGCTATGATATAG 351 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18749870377 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5