BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg942536
Length=2480
Score E
Sequences producing significant alignments: (Bits) Value
AT4G07410.1 | Symbols: | Transducin family protein / WD-40 rep... 3875 0.0
AT1G27470.1 | Symbols: | transducin family protein / WD-40 rep... 1858 0.0
> AT4G07410.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr4:4201249-4205224 REVERSE LENGTH=2752
Length=2752
Score = 3875 bits (2098), Expect = 0.0
Identities = 2368/2497 (95%), Gaps = 24/2497 (1%)
Strand=Plus/Plus
Query 1 CACTTCTCCTTCTTC-TCCGTCATGCTCGAATACCGTTGCAGCTCCGTTGACTGGAAACC 59
||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 67 CACTTCTCCTTCTGCTTCCGTCATGCTCGAGTACCGTTGCAGCTCCGTTGACTGGAAACC 126
Query 60 ATCACCGGTGGTAGCCCTAGCTAACAGCTCCGACGACTCACAAGTCGCGGCGGCTCGCGA 119
||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 127 ATCACCGGTGGTAGCCCTAGCTAACAGCTCCGACGACTCTCAAGTCGCCGCCGCTCGCGA 186
Query 120 GGACGGTTCTCTTGAAATCTGGCTCGTCTCCCCCGGCGCCGTCGGATGGCACTGTCAACT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GGACGGTTCTCTTGAAATCTGGCTCGTCTCCCCCGGCGCCGTCGGATGGCACTGTCAACT 246
Query 180 CACTATCCATGGCGATCCAAATTCGAGAATCTCGTCTCTTGCGTGGTGCTGTTCTGGTTC 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 247 CACTATCCATGGCGATCCAAATTCGAGAATCTCGTCTCTTGCGTGGTGCTGTTCTCCTTC 306
Query 240 TAAAGGGCTGCCTTCGGGTCGGTTGTTTTCTTCTAGCATCGATGGCTCCATTTCTGAATG 299
|| |||||| ||||| |||||||| || || ||||||||||||||||| |||||||||||
Sbjct 307 TATAGGGCTTCCTTCTGGTCGGTTATTCTCCTCTAGCATCGATGGCTCTATTTCTGAATG 366
Query 300 GGATCTTTTCGATTTGAAGCAGAAGATTGTGCTTGAGTCTATTGGATTCTCGATATGGCA 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 367 GGATCTTTTCGATTTGAAGCAGAAGATTGTGCTTGAGTCTATTGGAATCTCGATATGGCA 426
Query 360 AATGGCATTGGCTCCGATTAGTGTAGCCTCCATTGATGTAGAAGGTATTAAGAATGGATA 419
||||||||||||||||||||| | | ||| | |||||||||||||||||||||||||||
Sbjct 427 AATGGCATTGGCTCCGATTAGCGGATTCTCGAGTGATGTAGAAGGTATTAAGAATGGATA 486
Query 420 CTCGAGT--G--A--G-A--ATGAGGAAGAGAGTGGGAGTGAAGAAGATGGTTCTGACTC 470
|| |||| | | | | |||||||||||| |||||||||||||||||||||||| ||
Sbjct 487 CTTGAGTGAGAAATCGAATGATGAGGAAGAGATTGGGAGTGAAGAAGATGGTTCTGATTC 546
Query 471 GGATGAGTTTCATGAGCAA-TCAGATGGTTCTGATACAGATAGGCTTCTTGCAGCTGCTT 529
||||||||||||||| || ||||| || || | ||||||| |||||||||||||||
Sbjct 547 CGATGAGTTTCATGAG-AAGTCAGA-GG--AGGAGATAGATAGGATTCTTGCAGCTGCTT 602
Query 530 GTGATGATGGTTGTGTGAGACTGTACCGTATCTCTGACTTAGACAAGTTAACTTACTATA 589
||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||
Sbjct 603 GTGATGATGGTTGTGTGAGACTGTACCGTATCTCTAATTTAGAAAAGTTAACTTACTATA 662
Query 590 GATCATTGCCTAGGGTCAGTGGACGTGCTTTAAGTGTAACATGGAGTCCGGACGCAAAGA 649
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct 663 GATCATTGCCTAGGGTCAGTGGACGTGCTTTAAGTGTAACATGGAGTCCAGATGCAAAAA 722
Query 650 GGATCTTTTCGGGTAGCAGTGATGGGCTGATAAGATGCTGGGACGCTAACTCATGTCAGG 709
||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 723 GGATCTTTTCGGGGAGCAGTGATGGGCTGATAAGATGCTGGGACGCTACCTCGTGTCATG 782
Query 710 AGGTATACCGAATTACCGTTGGTCTTGGTGGACTGGGGAGTAGTTCTGAGATCTGTGTTT 769
|||||||| ||||||| | ||||||||||||||| || ||||||||||||||||||||||
Sbjct 783 AGGTATACAGAATTACAGCTGGTCTTGGTGGACTAGGAAGTAGTTCTGAGATCTGTGTTT 842
Query 770 GGTCACTTCTATCGTTGAGGTGTTCAGTTCTTGTGAGTGGAGATAGTACAGGAACTGTCC 829
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 GGTCACTTCTTTCGTTGAGGTGTTCAGTTCTTGTGAGTGGAGATAGTACAGGAACTGTCC 902
Query 830 AATTTTGGGATAGTCAGCATGGAACCCTTTTGGAAGCACACTCTAATCACAAAGGTGATG 889
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 AGTTTTGGGATAGTGAGCATGGAACCCTTTTGGAAGCACACTCTAATCACAAAGGTGATG 962
Query 890 TCAATACTCTTGCAGCATCCCCCAGCCATAATCGAGTCTTTTCTGCTGGTGCGGATGGAC 949
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCAATACTCTTGCAGCAGCCCCCAGCCATAATCGAGTCTTTTCTGCTGGTGCGGATGGAC 1022
Query 950 AGGTTATTCTCTATAAGCTCTCCGGTAGGACTAATGGTTCTCAAGATTTGAAGCCTTCTT 1009
||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct 1023 AGGTTATCCTTTATAAGCTCTCTGGTAGTACTAACGGTTCTCAAGATTTGAAGCCTTCTT 1082
Query 1010 CCTCTCAGAAATGGGACTATATTGGTTATGTAAAGGCTCATACACATGACATCAGAGCTC 1069
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1083 CCTCTCAGAAATGGGACTATATTGGTTATGTCAAGGCTCATACACATGACATCAGAGCTC 1142
Query 1070 TTACAGTTGCTGTACCAATTAGTCGAGAAGATCCTTTTCCGGATGATATACTGCCAGATA 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 TTACAGTTGCTGTACCAATTAGTCGAGAAGATCCTTTTCCGGATGATATACTGCCAGATA 1202
Query 1130 AAGCAAGTCGTAAACATCGCAAAAAGGGGAAGCCGGTTGACTTTACTTACCATAAATGGG 1189
|||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1203 AAGCGAGTCGTAAACATCGCAAAAAGGGGAAGCCGGTTGACTTCACTTATCATAAATGGG 1262
Query 1190 CTCATTTGGGTGTTCCGATGCTTATTTCTGCTGGTGATGATGCAAAGCTTTTTGCATATT 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 CTCATTTGGGTGTTCCGATGCTTATTTCTGCTGGTGATGATGCAAAGCTTTTTGCATATT 1322
Query 1250 CAATTCAGGAATTTACTAAGTTCTCCCCACATGATATATGTCCTGCACCTCAGAGAGTAC 1309
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1323 CAATTCAGGAATTTACTAAGTTCTCCCCACATGATATATGTCCTGCGCCTCAGAGAATAC 1382
Query 1310 CCATGCAAATGGTACATAATTCGATGTTCAATAAGACTTCTCTTCTCCTGGTTCAGGGTA 1369
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1383 CCATGCAAATGGTACATAATTCGATGTTCAATAAGACTTCTCTTCTACTGGTTCAGGGTA 1442
Query 1370 TTAGTACTTTAGATATTCTTCGACTTAATATAAGCAGTGATTCTAGTGGACGTGCCTCAA 1429
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1443 TTAGTACTTTAGATATTCTTCGACTTAATATAAGCAGTGATTCTAGTGGTCGTGCCTCAA 1502
Query 1430 CAAAGTCATTGGTTCGTGTTAAAAGTAGAGATGCCCGAAAGATCATATGCAGTGCAATTT 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 CAAAGTCATTGGTTCGTGTTAAAAGTAGAGATGCCCGAAAGATCATATGCAGTGCAATTT 1562
Query 1490 CTAACACCGGATCACTTTTTGCTTACTCTGACCAAATTGGCCCCAGTCTGTTTGAGTTGA 1549
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1563 CTAACACCGGATCACATTTTGCTTACTCTGACCAAATTGGCCCCAGTCTGTTCGAGTTGA 1622
Query 1550 AGAAAAATGAGTTTACAAAGTGTCCATGGAGTGTTAGTAGAAGGCGACTTCCTGAACTTC 1609
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 AGAAAAATGAATTTACAAAGTGTCCATGGAGTGTTAGTAGAAGGCGACTTCCTGAACTTC 1682
Query 1610 CATTTGCACATTCCATGATTTTCAGTTCGGACTGCTCTCGCCTAATAATAGCCGGGCATG 1669
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 1683 CATTTGCACATTCCATGATTTTCAGTTCGGACTGCTCTCGTCTAATAATAGCAGGGCATG 1742
Query 1670 ACAGAAGGATATATACTATTGACATAAGTAGTTTGGAACTAGTATATGCATTTACACCAT 1729
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 ATAGAAGGATATATACTATTGACATAAGTAGTTTGGAACTAGTATATGCATTTACACCAT 1802
Query 1730 CTCGGGAGGAGCATGAAGGTGAAGCTCCA-C-C-TAAGGAGCCTCCGATAACAAAATTGT 1786
|| |||||||||||||||||||||||||| | | |||||||||||| |||||||||||||
Sbjct 1803 CTAGGGAGGAGCATGAAGGTGAAGCTCCAACACCTAAGGAGCCTCCAATAACAAAATTGT 1862
Query 1787 TTACTAGCTCAGATGGTCAGTGGCTAGCTGCTATCAATTGCTTTGGGGACGTCTATGTAT 1846
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1863 TTACTAGCTCAGATGGTCAGTGGCTAGCTGCTATCAATTGCTTTGGGGACATCTATGTAT 1922
Query 1847 TTAACCTCGAAACACAAAGGCAGCATTGGTTCATATCAAGACTTGATGGTGCATCTGTTG 1906
| ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct 1923 TCAACCTCGAAACACAAAGGCAGCACTGGTTCATTTCAAGACTCGATGGTGCATCTGTTA 1982
Query 1907 CGGCTGCTGGATTTCATCCCTGGAACAACAATGTGCTTGTGATCTCAACCTCCTCGAACC 1966
| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
Sbjct 1983 CCGCTGCTGGATTTCATCCCTGGAATAACAATGCACTTGTGATCTCAACCTCCTCGAATC 2042
Query 1967 AGGTCTTTGCTTTTGATGTAGAAGCTAGACAGTTAGGCAAGTGGTCGTTGCTACACACAT 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2043 AGGTCTTTGCTTTTGATGTAGAAGCTAGACAGTTAGGCAAGTGGTCGTTGCTAAACACTT 2102
Query 2027 ATGTTCTGCCAAAGAGGTATCAAGAGTTTCCCGGGGAGGTCCTTGGACTCTCATTCTCCC 2086
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2103 ATGTTCTGCCAAAGAGGTATCAAGAGTTTCCTGGGGAGGTCCTTGGACTCTCATTCTCCC 2162
Query 2087 CATCACCAAATTCATCGTCTGTGATCGTTTACAGTTCCAGGGCGAAGTGTTTAATCGACT 2146
| |||||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||
Sbjct 2163 CGTCACCAAATTCATCATCTGTGATAGTTTACAGTTCCAGAGCGAAATGTTTGATCGACT 2222
Query 2147 TTGGGAAGCCTGTGGAAGAAGATGAAGAGAATGATTTACCAAACGGCAATCTT-TCTAAA 2205
| ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 2223 TCGGGAAGCCTGTGGAAGAAGATGAAGAGTATGATTTACCAAACGGCAAT-TTGTCTAAA 2281
Query 2206 ACGCTAGAAGGTAAACTTGTCAACTTGGGCTTGAAAAAGGGAAAGGGTACAAACCGAAAA 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2282 ACGCTAGAAGGTAAACTTGTCAACTTGGGCTTGAAAAAGGGAAAGGGTACAAACCGAAAA 2341
Query 2266 CGTCGGTTAGATGAGTATCAGTTAGAGGGTAAG-GCTACCGAGA-GAAAGAACTTTGAAA 2323
||||||||||||||||||||||||||||||||| | || || | |||||||||| ||||
Sbjct 2342 CGTCGGTTAGATGAGTATCAGTTAGAGGGTAAGAG-TAATGA-ACGAAAGAACTTCGAAA 2399
Query 2324 TCTTACCCTCAAAGCATCCAGTTTTATTCGTGGGACACCTTTCTAAAAACTCAATCCTGG 2383
||||||| ||||| || || |||||||||||||| |||||||||||||||||||||||||
Sbjct 2400 TCTTACCTTCAAACCACCCTGTTTTATTCGTGGGTCACCTTTCTAAAAACTCAATCCTGG 2459
Query 2384 TGATAGAGAAACCGTGGATGGATGTTGTCAAGAGTTTGGATTCTCAACCAGTGGACAGAC 2443
||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2460 TGATAGAGAAACCATGGATGGATGTTGTCAAGAGTTTGGATAATCAACCAGTAGACAGAC 2519
Query 2444 ATATTTTTGGAACTTGAAGTCAATGGAGTTGTTTGTC 2480
||||||||||||||||||| |||||||||||||||||
Sbjct 2520 ATATTTTTGGAACTTGAAGACAATGGAGTTGTTTGTC 2556
> AT1G27470.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:9540113-9544292 REVERSE LENGTH=2762
Length=2762
Score = 1858 bits (1006), Expect = 0.0
Identities = 2019/2499 (81%), Gaps = 106/2499 (4%)
Strand=Plus/Plus
Query 21 CATGCTCGAATACCGTTGCAGCTCCGTTGACTGGAAACCATCACCGGTGGTAGCCCTAGC 80
|||| | || ||||| ||||||||| | || ||||| ||||| ||||||||||| || ||
Sbjct 74 CATGTTTGAGTACCGGTGCAGCTCCATCGATTGGAAGCCATCTCCGGTGGTAGCTCTGGC 133
Query 81 TAACAGCTCCGACGACTCACAAGTCGCGGCGGCTCGCGAGGACGGTTCTCTTGAAATCTG 140
| |||| |||||| || || ||||| || ||||| ||||| ||||||||||| ||||
Sbjct 134 CACCAGCGCCGACGGTTCTCAGGTCGCCGCAGCTCGTGAGGATGGTTCTCTTGAGCTCTG 193
Query 141 GCTCGTCTCCCCCGGCGCCGT-CGGATGGCACTGTCAACTCACT-ATCCATGGCGATCCA 198
||||||||| ||||| | | | | ||||||||||| |||| | || ||||| ||||||
Sbjct 194 GCTCGTCTCTCCCGGTG-CTTCCTCTTGGCACTGTCAGCTCA-TCATTCATGGAGATCCA 251
Query 199 AATTCGAGAATCTCGTC-TCTTGCGTGGTGCT-GTTCTGGTTCTAAAGG-GCTGCCTTCG 255
|| |||||||||||| | |||||||||| | || ||||||||||||| || ||||
Sbjct 252 AAATCGAGAATCTCG-CACCTTGCGTGGT-TTGGTACTGGTTCTAAAGGTTCT-TCTTCC 308
Query 256 GGTCGGTTGTTTTCTTCTAGCATCGATGGCTCCATTTCTGAATGGGATCTTTTCGATTTG 315
| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| |||
Sbjct 309 GCTAGATTGTTTTCTTCGAGCATTGATGGCTCAATTTCAGAGTGGGATCTTTTCGACTTG 368
Query 316 AAGCAGAAGATTGTGCTTGAGTCTATTGGATTCTCGATATGGCAAATGGCAT-TGGCTCC 374
||||||||| | || || || || ||||| || || || |||||||| || | |||| ||
Sbjct 369 AAGCAGAAGGTCGTCCTAGATTCAATTGGGTTTTCAATCTGGCAAATAGC-TCTGGCCCC 427
Query 375 GA--T-TAGTGTAGCCTCCATTGATGTAG--AAGGT-ATTAAGAATGGATACTCGAGTGA 428
| | || || ||| | | | | || ||| | ||| |||||||||||| ||||||
Sbjct 428 TATCTCTATTGAAGCAGAAAGTAAAGAAGCTAAGCTGATTCAGAATGGATACTTGAGTGA 487
Query 429 G-AAT--------GAGGAAGAGAGTGGGAGTGAAGAAGATGGTTCTGACTCGGATGAGTT 479
| ||| |||||||| ||| ||||| ||||||| ||| || | ||| ||| |
Sbjct 488 GAAATCAGACGACGAGGAAGAAAGT-GGAGT--TGAAGATGATTCAGAGTTGGACGAGCT 544
Query 480 TCATGAGCAA-TCAGATGGTTCTGATACAGATAGGCTTCTTGCAGCTGCTTGTGATGATG 538
| ||||| || | || || || | ||||||| |||||||||||||||||||||||
Sbjct 545 TGATGAGAAAGT-GGA-GG-CCT--T--GGATAGGCATCTTGCAGCTGCTTGTGATGATG 597
Query 539 GTTGTGTGA-GACTGTACCGTATCTCTGACT-TAGACAAGTTAACTTACTATAGATCATT 596
| ||||||| || | || ||||||||| | | ||||||||||| ||||||||||| ||
Sbjct 598 GCTGTGTGAGGA-TATATTATATCTCTGAATCT-GACAAGTTAACGTACTATAGATCTTT 655
Query 597 GCCTAGGGTCAGTGGACGTGCTTTAAGTGTAACATGGAGTCCGGACGCAAAGAGGATCTT 656
||||||||||| ||| |||||||||||||| || |||||| |||||||| ||||||||||
Sbjct 656 GCCTAGGGTCACTGGTCGTGCTTTAAGTGTGACGTGGAGTGCGGACGCACAGAGGATCTT 715
Query 657 TTCGGGTAGCAGTGATGGGCTGATAAGATGCTGGGACGCTAACTC-ATGTCAGGAGGTAT 715
||| || || || ||||||||||||||||||||||| ||||| || ||| || |||||||
Sbjct 716 TTCAGGCAGTAGCGATGGGCTGATAAGATGCTGGGATGCTAA-TCTATGCCATGAGGTAT 774
Query 716 ACCGAATTACCGTTGGTCTTGGTGGACTGGGGAGTAGTTCTGAGATCTGTGTTTGGTCAC 775
| |||| || ||||| ||||| |||||||| | | | |||||| |||| | |||||||
Sbjct 775 ATAGAATAACAGTTGGACTTGGAGGACTGGGAAATGGGTCTGAGCTCTGCATCTGGTCAC 834
Query 776 TTCTATCGTTGAGGTGTTCAGTTCTTGTGAGTGGAGATAGTACAGGAACTGTCCAATTTT 835
|||| || ||||| | | ||||||||| ||||||||||||||||||| |||||| ||||
Sbjct 835 TTCTTTCATTGAGATATGGAGTTCTTGTCAGTGGAGATAGTACAGGAAGTGTCCAGTTTT 894
Query 836 GGGATAGTCAGCATGGAACCCTTTTGGAAGCACACTCTAATCACAAAGGTGATGTCAATA 895
||||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||
Sbjct 895 GGGATAGCCAGCATGGAACCCTTTTGCAGGCGCATTCTAATCACAAGGGTGATGTCAATG 954
Query 896 CTCTTGCAGCATCCCCCAGCCATAATCGAGTCTTTTCTGCTGGTGCGGATGGACAGGTTA 955
|||||||||||||||| || ||||| || || |||||||| || || |||||||||||||
Sbjct 955 CTCTTGCAGCATCCCCAAGTCATAACCGGGTGTTTTCTGCAGGCGCTGATGGACAGGTTA 1014
Query 956 TTCTCTATAAGCTCTCCGGTAGG-ACTA-ATGGTTCTCAAGATTTGAAGCCTTCTTCCT- 1012
|| | ||||||||||| ||| || || | | | || |||||||| || ||||||| ||
Sbjct 1015 TTTTATATAAGCTCTCTGGT-GGTAC-ATCTAGATCACAAGATTTTAAACCTTCTT-CTG 1071
Query 1013 CTCAGAAATGGGACTATATTGGTTATGTAAAGGCTCATACACATGACATCAGAGCTCTTA 1072
||||||| ||||| ||||| |||| ||||| ||||||||||||||| ||||| ||||| |
Sbjct 1072 CTCAGAAGTGGGATTATATCGGTTGTGTAAGGGCTCATACACATGATATCAGGGCTCTAA 1131
Query 1073 CAGTTGCTGTACCAATTAGTCGAGAA-GATCCTTTTCCGGATGATA-TACTGCCAGA-TA 1129
| ||||| || ||||| ||| | ||| | ||| |||| | |||| | ||| | | |
Sbjct 1132 CTGTTGCAGTGCCAATAAGTTGGGAAGGTTCC-ATTCC--A-GATAGGAATGCAAAAGT- 1186
Query 1130 AAGCAAGTCGTAAACATCGCAAAAAGGGGAAGCCGGTTGACTTT-ACTTACCATAAATGG 1188
|| |||||| |||||| |||| || || |||||| || ||| | |||||||||||||
Sbjct 1187 AA-CAAGTCCTAAACAGCGCAGGAA--GG-AGCCGGCTG-GTTTCAGTTACCATAAATGG 1241
Query 1189 GCTCATTTGGGTGTTCCGATGCTTATTTCTGCTGGTGATGATGCAAAGCTTTTTGCATAT 1248
|| |||||||| ||||||||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct 1242 GCACATTTGGGGGTTCCGATGCTCATTTCAGCTGGTGATGATGCCAAGCTTTATGCATAC 1301
Query 1249 TCAATTCAGGAATTTACTAAGTTCTCC-CCACATGATATATGTCCTGCACCTCAGAGAGT 1307
|| |||| || |||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct 1302 TCGGTTCAAGAGTTTACTAAGTTC-CCTCCACATGATATATGTCCTGCGCCTCAGAGAGT 1360
Query 1308 ACCCATGCAAATGGTACATAATTCGA-TGTTCAATAAGACTTCTCTTCTCCTGGTTCAGG 1366
|||||||| |||||||||||| | | |||||||| |||||||||||||| |||||||||
Sbjct 1361 GCCCATGCAGATGGTACATAATAC-AGTGTTCAATCAGACTTCTCTTCTCTTGGTTCAGG 1419
Query 1367 -GTATTAGTACTTTAGATATTCTTCG-ACTTAATATAAGCAGTGATTCTAGTGGACGTGC 1424
| || || |||||||||||||||| | || | ||||||| |||||||||||| ||||
Sbjct 1420 ATTCTT-GTTCTTTAGATATTCTTCGTA-TTCACATAAGCAATGATTCTAGTGGGCGTGT 1477
Query 1425 CTCAACAAAGTCATTGGTTCGTGTTAAAAGTAGAGATGCCCGAAAGATCATATGCAGTGC 1484
||| || ||| ||||||||||||||||||||| |||||| || |||||||||||||||||
Sbjct 1478 CTCCACTAAGCCATTGGTTCGTGTTAAAAGTAAAGATGCTCGGAAGATCATATGCAGTGC 1537
Query 1485 AATTTCTAACACCGGATCACTTTTTGCTTACTCTGACCAAATTGGCCCCAGTCTGTTTGA 1544
|||||||||||| ||||||||||||||||| ||||| ||| || |||| |||||||||||
Sbjct 1538 AATTTCTAACACAGGATCACTTTTTGCTTATTCTGATCAAGTTCGCCCAAGTCTGTTTGA 1597
Query 1545 GTTGAAGAAAAATGAGTTTACAAAGTGTCCATGGAGTGTTAGTAGAAGGCGACTTCCTGA 1604
||||||||||||| | || |||| ||||||||||| || ||||| |||||||||| |
Sbjct 1598 GTTGAAGAAAAATAAAATTGGAAAGAATCCATGGAGTGCTAATAGAAAGCGACTTCCT-A 1656
Query 1605 A-CTTCCATTTGCACATTCCATGATTTTCAGTTCG-GACTGCTCTCGCCTAATAATAGCC 1662
| ||||| ||||| ||||||||| ||||||| | | ||||||||||| || ||||||||
Sbjct 1657 ATCTTCCGTTTGCCCATTCCATGGTTTTCAGCT-GTGACTGCTCTCGGCTGATAATAGCT 1715
Query 1663 GGGCATGACAGAAGGATATATACTATTGACATAAGTAGTTTGGAACTAGTATATGCATTT 1722
|| ||||| || |||||||||| | ||||| | |||| |||| || || || | |||
Sbjct 1716 GGACATGATAGGAGGATATATATTGTTGACGTTGGTAGCATGGAGTTATTACATTCTTTT 1775
Query 1723 ACACCATCTCG-GGAGG-AGCATGAAGGTGAAGCTCCACCTAAGGAGCCTCCGATAACAA 1780
|||||| | | ||||| | || ||||||||| |||| ||| | |||||||| || ||||
Sbjct 1776 ACACCA-CGCCAGGAGGGA-CAGGAAGGTGAATCTCCTCCTCATGAGCCTCCAATTACAA 1833
Query 1781 AATTGTTTACTAGCTCAGATGGTCAGTGGCTAGCTGCTATCAATTGCTTTGGGGACGTCT 1840
|| ||| |||||||||| ||| | | ||| |||||||||||||||||||||||||| | |
Sbjct 1834 AACTGTATACTAGCTCAAATGATGATTGGTTAGCTGCTATCAATTGCTTTGGGGACATAT 1893
Query 1841 ATGTATTTAACCTCGAAACACAAAGGCAGCATTGGTTCATATCAAGACTTGATGGTGCAT 1900
|||| || ||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 1894 ATGTGTTCAACCTGGAAACGCAGAGGCAGCATTGGTTCATATCAAGGCTTGATGGTGCAT 1953
Query 1901 CTGTTGCGGCTGCTGGATTTCATCCCTGGAACAACAATGTGCTTGTGATCTCAACCTCCT 1960
||||||| || ||||| |||||||| || ||||||||||| |||||||||| ||||| |
Sbjct 1954 CTGTTGCAGCCGCTGGTTTTCATCCGAGGGACAACAATGTGATTGTGATCTCCACCTCTT 2013
Query 1961 CGAACCAGGTCTTTGCTTTTGATGTAGAAGCTAGACAGTT-AGGCAAGTGGTCGTTGCTA 2019
| |||||||||||||| || ||||| || |||||| |||| || ||||||||| |||||
Sbjct 2014 CAAACCAGGTCTTTGCATTGGATGTGGAGGCTAGAGAGTTGAG-CAAGTGGTCATTGCTG 2072
Query 2020 CACACATAT-GTTCTGCCAAAGAGGTATCAAGAGTTTCCCGGGGAGGTCCTTGGACTCTC 2078
|| || | | || ||||||||||| || ||| | ||||| || |||||| | ||||||||
Sbjct 2073 CAGACTTTTTGT-CTGCCAAAGAGCTACCAAAATTTTCCTGGTGAGGTCGTAGGACTCTC 2131
Query 2079 ATTCTCCCCATCACCAAATTCATCGTCTGTGATCGTTTACAGTTCCAGGGCGAAGTGTTT 2138
|||||| ||||||||| |||||| ||||| ||| ||||||| ||||| || ||||||||
Sbjct 2132 ATTCTCTCCATCACCATGTTCATCATCTGTCATCATTTACAGCTCCAGAGCTAAGTGTTT 2191
Query 2139 AATCGACTTTGGGAAGCCTGTGGAAGAAGATGAAGAGAATGATTTACCAAACGGCAATCT 2198
|| || ||||||||||| | |||| |||| ||||| | ||| |||| | ||||||
Sbjct 2192 GATTGAATTTGGGAAGCCGGCGGAACAAGACGAAGACACGGATACACCAT--G-CAATCT 2248
Query 2199 TTCT-AAAACGCTAGAAGGTAAACTTGTCAA-C-TTGGGCTTGAAAAAGGGAAAGGGTAC 2255
|| |||| ||||||||||||||||| ||| | || | | |||| ||| || ||| |
Sbjct 2249 GTCCGAAAA-GCTAGAAGGTAAACTTG-CAAGCATTAGTAT-GAAATTGGGGAATGGTGC 2305
Query 2256 AAACCGAAAACGTCGGTTAGATGAGTATCAGTTAGAGGGTAAG-GCTACCGAGAGAAAGA 2314
| ||||||| ||||||| |||||||| |||| ||||| | || |||||||||
Sbjct 2306 TCA---AAAACGTAGGTTAGAGGAGTATCAAAAAGAGAGTAAGAG-TAATAAGAGAAAGA 2361
Query 2315 ACTTTGAAATCTTACCCTCAAAGCATCCAGTT-T-TATTCGTGGGACACCTTTCTAAAAA 2372
| |||||||| || |||||||||| |||||| | |||| | |||| || || |||||
Sbjct 2362 AGTTTGAAATGGTAACCTCAAAGCACCCAGTTCTATATT--TACGACATCTATC-AAAAA 2418
Query 2373 CT-CAATCCTGGTGATAGAGAAACCGTGGATGGATGTTGTCAAGAGTTTGGATTCTCAAC 2431
| ||||| |||| ||||||||||| |||||||| ||| |||||| ||||||| | ||||
Sbjct 2419 GTGCAATCTTGGTTATAGAGAAACCATGGATGGAGGTTATCAAGAATTTGGATACACAAC 2478
Query 2432 CAGTGGACAGACATATTTTTGGAACTTGAAGTCAATGGA 2470
|||| |||||||||| || || || | ||| ||| |||
Sbjct 2479 CAGTTCACAGACATATATTCGGGACAT-AAG-CAAGGGA 2515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123059511179
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5