BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg942638
Length=2386
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08480.1 | Symbols: MAPKKK9, MEKK2 | mitogen-activated prote... 2045 0.0
AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/E... 1323 0.0
AT4G08470.1 | Symbols: MAPKKK10, MEKK3 | MAPK/ERK kinase kinase... 909 0.0
AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | prot... 848 0.0
> AT4G08480.1 | Symbols: MAPKKK9, MEKK2 | mitogen-activated protein
kinase kinase kinase 9 | chr4:5387652-5391507 REVERSE LENGTH=2838
Length=2838
Score = 2045 bits (1107), Expect = 0.0
Identities = 1491/1672 (89%), Gaps = 43/1672 (3%)
Strand=Plus/Plus
Query 729 TTCAGAGTCAGGGTTTGAGTGAAGCAGGTCCTAGTGGTGTTGTTGTTGCTTCTAATTTGA 788
||||| |||| | |||||||||||||||| ||| |||||||||||||||||||||||| |
Sbjct 701 TTCAGGGTCATGATTTGAGTGAAGCAGGTTCTATTGGTGTTGTTGTTGCTTCTAATTTTA 760
Query 789 CGGTTTCCGAGTCGAACAAGATTGAGAACTTAAGTAGTTTGACGGATAAGGAAGTTGTTG 848
|| |||| |||||||| |||||||||||||||| |||||||| |||||||||| ||||||
Sbjct 761 CGCTTTCTGAGTCGAATAAGATTGAGAACTTAAATAGTTTGAGGGATAAGGAAATTGTTG 820
Query 849 ATGGTGTTACGGTAGAGAACAAGCGTGGTATTGAGCGAAAACCGACCATTTTGGTGAAGT 908
|||||| || ||||||||| | | | |||||||||||||||||||| |||||||||||||
Sbjct 821 ATGGTGATATGGTAGAGAATAGGTGCGGTATTGAGCGAAAACCGACTATTTTGGTGAAGT 880
Query 909 CGAGAGGGTATCTTGTTC-CGAATGATG-TGGTGGCTGTTGGTGGTGGAATTAAGGGGGT 966
|||||||||||||||||| | ||||||| | |||| ||||||||||||||||||||| ||
Sbjct 881 CGAGAGGGTATCTTGTTCAC-AATGATGAT-GTGGGTGTTGGTGGTGGAATTAAGGGTGT 938
Query 967 AAGACCACCGGTACTAAACCTTACTCCG-GCTGATAAGGAAGTTGTTGATGATGGTATGG 1025
||||||||| ||||||||| || || || || ||||||||||||||||||| ||||| ||
Sbjct 939 AAGACCACCAGTACTAAACGTTCCT-CGTGCGGATAAGGAAGTTGTTGATGGTGGTACGG 997
Query 1026 TGGAGAACAAGAGTGATATTGAACAAAAACCAACTATTTTGGTGAAGTCAAAAGGGTATC 1085
|||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 998 TGGAGAGCAAGAGTGGTATTGAATGGAAACCAACTATTTTGGTGAAGTCAAAAGGGTATC 1057
Query 1086 TTGTTCCCAATGATGCGGTGGTTGTTGGTGGTGGAATTAAGGTAATACCACCAGTACTAA 1145
||||| |||||||| ||||| | | || ||||| | |||| |||||||
Sbjct 1058 TTGTTTCCAATGAT--GGTGG--AAT-AAAG-GG------GGTAACATCACCGGTACTAA 1105
Query 1146 ACCTTCCTCAAGA-AGATAAGGAAGTCGTTGATGGTGGTACGGTAGAGAATAGGA-GTGG 1203
| ||| | | || |||||||||||| |||||| |||||||||||||||||| || ||||
Sbjct 1106 ATCTT-CGCCCGACAGATAAGGAAGTTGTTGATAGTGGTACGGTAGAGAATA-GACGTGG 1163
Query 1204 TATAAAGGGGGTAAGACCATCAGTACTTAAGCCTCCTCCGGTGATGAAGCTACCTCCAGT 1263
||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1164 TATTAAGGGCGTAAGACCATCGGTACTTAAGCCTCCTCCGGTGATGAAACTACCTCCAGT 1223
Query 1264 TGATCTTCCGGGATCATCTTGGGATTTTCTTACTCATTTTGCTCCGGATAGTGAAACAGT 1323
||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||
Sbjct 1224 TGATCTTCCGGGATCATCTTGGGATATCCTTACTCATTTTGCTCCTGATAGTGAAATAGT 1283
Query 1324 TAGGCGGCCGAGTTCCTCTTCTTCTTCCGAAAATGGTTGTGATGAAGAGGAAGCCGGGGA 1383
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1284 TAGGCGGCCGAGTTCCTCTTCTTCTTCCGAAAATGGTTGTGATGAAGAAGAAGCCGAGGA 1343
Query 1384 TGAAAAAGTGGAAACGGAAGAGACGGGAGATATGTTTATCCAAATGGATGATACGACTGA 1443
||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1344 TGACAAAGTGGAAAAGGAAGAGACGGGAGATATGTTTATCCAGTTGGAGGATACGACTGA 1403
Query 1444 TGAGGCATGCTCATTCACTACAAATGAGTGTGACTCCTCAAGTTCAGTATCCAATACCTC 1503
|||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct 1404 TGAGGCATGCTCATTCACTACAAACGAGGGTGACTCCTCAAGTACAGTATCCAATACCTC 1463
Query 1504 GCCGATTTATGTCTCTGGAGGATCTATCAATACTTCTTGGCAAAAGGGTCAACTTCTGCG 1563
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1464 ACCGATTTGTGTCTCTGGGGGATCTATCAATACTTCTTGGCAAAAGGGTCAACTTCTGCG 1523
Query 1564 ACGAGGATCATTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGCTCTTCTTTTCTGT 1623
|| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1524 ACAAGGATCGTTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGGACTTCTTTGCTGT 1583
Query 1624 CGAGGAAGTTTCACTT-TTAGATCAGGGAAGTCAGGCACAAGAATGCATACAACAACTTG 1682
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1584 CAAGGAAGTTTCACTTCTT-GATCAGGGAAGTCAGGCACAAGAATGCATACAACAACTTG 1642
Query 1683 AGGGGGAAGTTGCACTACTTAGTCAGCTTGAGCATCGGAATATTCTGCGATACCGTGGCA 1742
|||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 1643 AGGGGGAAATTGCACTACTTAGTCAGCTTGAGCATCAGAATATTCTGCGATATCGTGGCA 1702
Query 1743 CAGACAAGGACGGGTCAAATTTGTACATCTTTCTTGAGCTTGTAACCCAAGGATCCCTTC 1802
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 1703 CAGACAAGGACGGGTCAAATTTGTATATTTTTCTTGAGCTTGTAACACAAGGATCCCTTC 1762
Query 1803 TAAAACTCTACCAAAGATACCAGCTTCGGGAATCTG-TAGTGTCTTTGTACACAAAACAG 1861
|| ||||||||| |||||||||| ||||||| || | || | || ||||||||||||||
Sbjct 1763 TAGAACTCTACCGAAGATACCAGATTCGGGACTC-GCTAATCTCCTTGTACACAAAACAA 1821
Query 1862 ATTCTTGACGGCTTGAAATATCTTCACGATAAAGGCTTTG-TTCACAGGGACATCAAATG 1920
|| |||||||| ||||||||||||||| ||||||| ||| ||||||||||||| |||||
Sbjct 1822 ATCCTTGACGGTTTGAAATATCTTCACCATAAAGG-TTTCATTCACAGGGACATTAAATG 1880
Query 1921 TGCAAATGTATTGGTGGACGCTAATGGCACCGTCAAACTTGCAGATTTTGGATTGGCAAA 1980
||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1881 TGCAACTATATTGGTGGACGCCAATGGCACCGTCAAACTTGCAGATTTTGGATTGGCAAA 1940
Query 1981 GGTGTCCAAGTTAAACGACAGTAAATCCTGCAAGGGAACTCCATTTTGGATGGCTCCGGA 2040
|||||| ||||||||||||| ||| ||| |||||| ||||| ||||||||||||||| ||
Sbjct 1941 GGTGTCAAAGTTAAACGACATTAAGTCCCGCAAGGAAACTCTATTTTGGATGGCTCCAGA 2000
Query 2041 GGTTATTAACCCCAAGGGTAATGATGATGGCTATGGAAGTCCAGCTGATATATGGAGCCT 2100
||||||||||| |||| |||||||| | | | | ||||||||||||||||||||||||
Sbjct 2001 GGTTATTAACCGGAAGGATAATGATGGTTAC-A-G-AAGTCCAGCTGATATATGGAGCCT 2057
Query 2101 TGGTTGCACTGTGCTAGAAATGTGTACCGGTCATATCCCCTACTTT-AGTCTA-ACACCC 2158
|| ||||||||||| ||||||||||| ||||| ||||| |||| | | |||| | ||||
Sbjct 2058 CGGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCATACTCTGA-TCTAGA-ACCC 2115
Query 2159 GTTCAAGCCCAGATTAGGATC-GAAAGGGGTACGCTTCCAGACA-TACCTGATACTCTAT 2216
||| |||||| | |||||||| ||| ||||||||||||| || | ||||||||||| |||
Sbjct 2116 GTTGAAGCCCTGTTTAGGATCAGAA-GGGGTACGCTTCCGGA-AGTACCTGATACTTTAT 2173
Query 2217 TGCTAGATGCTCGAG-ATTTCATAGTTACA-TGTCTCAAAGTGAACCCCGAAGAGCGGCC 2274
||||| ||||| | |||||||| ||| | ||||||||| ||||||| |||||||| ||
Sbjct 2174 CACTAGACGCTCG-GCATTTCATACTTA-AGTGTCTCAAATTGAACCCGGAAGAGCGTCC 2231
Query 2275 AACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGGCCCTTACCATCGTCGGGCTC 2334
||||||| |||| || ||||||||||||||||||||||||||||||||||| || |||||
Sbjct 2232 AACTGCAACTGAGCTACTGAACCATCCATTTGTGAGAAGGCCCTTACCATCCTCAGGCTC 2291
Query 2335 AGGATCAGCATCTCCGCTTATCCGCAGATGAGTCTAATTTTAGTAGATTGCC 2386
||||||| |||||||||| ||||| |||||| |||||||||| |||||||||
Sbjct 2292 AGGATCAACATCTCCGCTAATCCGTAGATGAATCTAATTTTATTAGATTGCC 2343
Score = 337 bits (182), Expect = 4e-91
Identities = 355/430 (83%), Gaps = 46/430 (11%)
Strand=Plus/Plus
Query 304 TCCCAATGAAGATATTTCTGTTTCAACTTCTTCGTCGATGACTCGCTCTTTGTTTATTGA 363
|||||||||||||||||| |||||||||||||| || | || | || || | ||||
Sbjct 252 TCCCAATGAAGATATTTCCGTTTCAACTTCTTC-TC---G-CT--AT-TTGGTGT-TTGA 302
Query 364 TAGAATTCTAGCTCGTATGAAGAAATCTCCTCTTCTTTCACCGGGAAGAAGAGGAGATAA 423
|| ||||||||||| |||||||||| ||||| ||| |||||||||||||
Sbjct 303 TAAAATTCTAGCTCTTATGAAGAAA------------TCACCAGGACGAAGAGGAGATAA 350
Query 424 GACAAGTCCGGTGCGGCGGTTAGACCGTCGTGATGC-GT--TGAGGAATATCAG-TTATG 479
||| ||||||| |||||||||||||||| ||||||| || |||||||||| | |||||
Sbjct 351 GACTAGTCCGGCGCGGCGGTTAGACCGTAGTGATGCGGTGAGGAGGAATATC-GATTATG 409
Query 480 ATGCAGGTGAAGATTCTTTTGGTTCAACTTCTTCGTTGTTGATGACTCGTTCTTTGGATT 539
| ||||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct 410 ACGCAGGTGAAGA---------TT---CTTCTTCGTTGTTGATAACTCGTTCTTTGGATT 457
Query 540 TCCCGAATCGTATTAGTTTTCGAGTCGGTGGAGTTGATGAAGGAGAAATTGATAGGATTT 599
|||||||||||| |||||||||||||| |||||||||||| |||||||| ||| ||||||
Sbjct 458 TCCCGAATCGTACTAGTTTTCGAGTCGATGGAGTTGATGATGGAGAAATAGATCGGATTT 517
Query 600 ATCGGTATTTTGATGTTTCTGGTCCTGAAGATTTTGCCATTTCTTCTGATGCTTGGGAAG 659
||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 518 ATCAGTATATTGGTGTTTCTGGTCCTGAAGATTTTGCTATTTCTTCTGATGCTTGGAAAG 577
Query 660 CTGGTA---AG---GAGCGTTCTTCTTCAGATGTTGTGAATAGGTTGAAGTCTCTTGA-C 712
|| ||| || ||||||||||||||||||||||| |||| ||| ||||||||||| |
Sbjct 578 CTCGTATGGAGCATGAGCGTTCTTCTTCAGATGTTGTTAATAAGTTAAAGTCTCTTGATC 637
Query 713 ATTGATTGTC 722
||||| |||
Sbjct 638 -TTGATAGTC 646
Score = 274 bits (148), Expect = 3e-72
Identities = 175/188 (93%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 23 ATGAAGAAGTCGTCGGATAAGTCACCGGTGCGGCGACATGACACGGCGAAGCAATTCAAC 82
|||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||
Sbjct 1 ATGAAGAAGTCGTCGGATAAGTCACCGGTGCGGCAACATGACACGGCGACGCAAATCAAC 60
Query 83 TCTGACGAAGTGTCTTCTTCTAGTTCCTTCACTGATTCCGAGTCGACTTGTTCCTTTTTG 142
||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct 61 TCTGACGCAGTGTCTTCTTCTACTTCCTTCACTGATTCCGACTCTACTTGTTCCTTTTTG 120
Query 143 ACTCCCTCTATGGAGTTCCCGGATCGCATCAGTTTCCGGCA-AATGGATTTGAGTGAAGC 201
|||||||| ||||||||||||||||| |||||||||||| | ||| ||||| ||||||||
Sbjct 121 ACTCCCTCCATGGAGTTCCCGGATCGAATCAGTTTCCGG-AGAATCGATTTTAGTGAAGC 179
Query 202 AGCTCCTA 209
||||||||
Sbjct 180 AGCTCCTA 187
> AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ERK
kinase kinase 1 | chr4:5403753-5407301 REVERSE LENGTH=2490
Length=2490
Score = 1323 bits (716), Expect = 0.0
Identities = 1051/1208 (87%), Gaps = 42/1208 (3%)
Strand=Plus/Plus
Query 1200 GTGGTATAAAGGGGGTAAGACCATCAGTACTTAAGCCTCCTCCGG-TGATGAAGCTACCT 1258
||||||| |||||| |||||||| ||||||||||||||||||||| | ||||| | |||
Sbjct 895 GTGGTATTAAGGGGCTAAGACCACCAGTACTTAAGCCTCCTCCGGCT-ATGAAACGACCC 953
Query 1259 CC-AGTTGATCTTCCGGGATCATCTTGGGATTTTCTTACTCATTTTGCTCCGGATAGTGA 1317
|| | |||||| || |||||| ||||||||||| || || ||||| ||||| | |||||
Sbjct 954 CCTA-TTGATCATCGGGGATCGTCTTGGGATTTCCTGACGCATTTCGCTCC--A-AGTGA 1009
Query 1318 AACAGTTAGGCGGCCGAGTT-C-C-TCTTCTTCTTCCGAAAATGGTTGTGATGAAGAGGA 1374
|||||||| ||||||||||| | | |||||||||||||| |||| || |||||||||||
Sbjct 1010 AACAGTTAAGCGGCCGAGTTCCTCTTCTTCTTCTTCCGAGGATGGATGCGATGAAGAGGA 1069
Query 1375 AGCCGGGGATGAAAAAGTGGAAACGGAAGAGACGGGAGATATGTTTATCCAAATGGATGA 1434
|| | ||| || ||| |||| ||||||||| ||||| || ||||||||| ||| ||
Sbjct 1070 AGGCAAGGAAGAGGAAGCGGAAGCGGAAGAGATGGGAGCTAGGTTTATCCAGTTGGGGGA 1129
Query 1435 TACGACTGATGAGGCATGCTCATTCACTACAAATGAGTGTGACTCCTCAAGTTCAGTATC 1494
|||| |||| ||| | ||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 1130 TACGGCTGACGAGACGTGCTCATTCACTACAAATGAGGGTGACTCCTCAAGCACAGTATC 1189
Query 1495 CAATACCTCGCCGATTTATGTC-TCTGGAGGATCTATCAAT-ACTTCTTGGCAAAAGGGT 1552
|||||| ||||| || ||| | ||||||| ||||| || || |||||||||||||||
Sbjct 1190 CAATACTTCGCCTATCTAT-CCAGATGGAGGAGCTATC-ATAACGTCTTGGCAAAAGGGT 1247
Query 1553 CAACTTCTGCGACGAGGATCATTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGCTC 1612
|||||| || |||||||||||||||| ||||||||||||| |||||| | ||||||| |
Sbjct 1248 CAACTTTTGGGACGAGGATCATTTGGTTCTGTGTATGAAGGCATTTCTGGAGATGGGGAC 1307
Query 1613 TTCTTTTCTGTCGAGGAAGTTTCACTT-TTAGATCAGGGAAGTCAGGCACAAGAATGCAT 1671
|||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1308 TTCTTTGCTGTCAAGGAAGTTTCACTTCTT-GATCAGGGAAGTCAGGCACAAGAATGCAT 1366
Query 1672 ACAACAACTTGAGGGGGAAG-TTGCACTACTTAGTCAGCTTGAGCATCGGAATATTCTGC 1730
||||||||||||||||| || || |||||||||||||||| |||||| ||||||| ||
Sbjct 1367 ACAACAACTTGAGGGGG-AGATTAAACTACTTAGTCAGCTTCAGCATCAGAATATTGTGA 1425
Query 1731 GATACCGTGGCACAGACAAGGACGGGTCAAATTTGTACATCTTTCTTGAGCTTGTAACCC 1790
|||| |||||||||| |||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 1426 GATATCGTGGCACAGCCAAGGATGGGTCAAACTTGTACATTTTTCTTGAGCTTGTAACCC 1485
Query 1791 AAGGATCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGAATCTGTAGTGTCTTTGT 1850
|||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct 1486 AAGGGTCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGACTCTGTAGTCTCCTTGT 1545
Query 1851 ACACAAAACAGATTCTTGACGGCTTGAAATATCTTCACGATAAAGGCTTTGTTCACAGGG 1910
|||| | ||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||
Sbjct 1546 ACACTAGACAGATTCTTGACGGTTTGAAATATCTCCACGATAAAGGTTTTATTCACAGGG 1605
Query 1911 ACATCAAATGTGCAAATGTATTGGTGGACGCTAATGGCACCGTCAAACTTGCAGATTTTG 1970
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1606 ACATCAAATGTGCAAATATATTGGTGGACGCTAATGGCGCCGTCAAACTTGCAGATTTTG 1665
Query 1971 GATTGGCAAAGGTGTCCAAGTTAAACGACAGTAAATCCTGCAAGGGAACTCCATTTTGGA 2030
||||||||||||| || ||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1666 GATTGGCAAAGGTTTCAAAGTTTAACGACATTAAGTCCTGCAAGGGAACTCCATTTTGGA 1725
Query 2031 TGGCTCCGGAGGTTATTAACCCCAAGGGTAATGATGATGGCTATGGAAGTCCAGCTGATA 2090
||||||| ||||||||||||| |||| | | | ||||||||||||||||||||||||||
Sbjct 1726 TGGCTCCAGAGGTTATTAACCGAAAGGAT-A-G-TGATGGCTATGGAAGTCCAGCTGATA 1782
Query 2091 TATGGAGCCTTGGTTGCACTGTGCTAGAAATGTGTACCGGTCATATCCCCTACT-TTAGT 2149
|||||||||| || ||||||||||| ||||||||||| ||||| |||||||||| | | |
Sbjct 1783 TATGGAGCCTCGGGTGCACTGTGCTGGAAATGTGTACTGGTCAGATCCCCTACTCTGA-T 1841
Query 2150 CT-AACACCCGTTCAAGCCCAGATTAGGATCGAAAGGGGTACGCTTCCAGACA-TACCTG 2207
|| | |||||||||||||| | ||||||||| ||||||||| ||||| || | ||||||
Sbjct 1842 CTCGA-ACCCGTTCAAGCCCTGTTTAGGATCGGAAGGGGTACTCTTCCGGA-AGTACCTG 1899
Query 2208 ATAC-TCTATTGCTAGATGCTCGAG-ATTTCATAGTTACA-TGTCTCAAAGTGAACCCCG 2264
|||| | ||| ||||||||||| | ||||||| ||| | ||||| ||||||||||| |
Sbjct 1900 ATACGT-TATCACTAGATGCTCG-GCTTTTCATACTTA-AGTGTCTTAAAGTGAACCCGG 1956
Query 2265 AAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGGCCCTTACCAT 2324
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1957 AAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGAAGACCCTTACCAT 2016
Query 2325 C-GT-----C-GG-G-CTCAGGATCAGCATCTCCGCTTATCCGCAGATGAGTCTAATTTT 2375
| || | || | ||| |||||||||||||| ||| |||| ||||||| ||||||||
Sbjct 2017 CCGTGGGTTCAGGAGGCTCGGGATCAGCATCTCCCCTTCTCCGTAGATGAGGCTAATTTT 2076
Query 2376 AGTAGATT 2383
|||| |||
Sbjct 2077 AGTAAATT 2084
> AT4G08470.1 | Symbols: MAPKKK10, MEKK3 | MAPK/ERK kinase kinase
3 | chr4:5383852-5387058 REVERSE LENGTH=1881
Length=1881
Score = 909 bits (492), Expect = 0.0
Identities = 687/779 (88%), Gaps = 21/779 (3%)
Strand=Plus/Plus
Query 1538 TCTTGGCAAAAGGGTCAACTTCT-GCGACGAGGATCATTTGGCTCTGTGTATGAAGCCAT 1596
||||||| |||||||||||||| | |||||||||||| || ||||||||||||||||||
Sbjct 924 TCTTGGCTGAAGGGTCAACTTCTAG-GACGAGGATCATATGCCTCTGTGTATGAAGCCAT 982
Query 1597 TTCAGAAGATGGGCTCTTCTTTTCTGTCGAGGAAGTTTCACTT-TTAGATCAGGGAAGTC 1655
||||||||||||| ||||||| ||||| |||||||||||||| || ||| |||||| ||
Sbjct 983 TTCAGAAGATGGGGACTTCTTTGCTGTCAAGGAAGTTTCACTTCTT-GATAAGGGAATTC 1041
Query 1656 AGGCACAAGAATGCATACAACAACTTGAGGGGGAAG-TTGCACTACTTAGTCAGCTTGAG 1714
|||||||||||||||| |||||||||||||||| || |||||||||||||||||||| ||
Sbjct 1042 AGGCACAAGAATGCATTCAACAACTTGAGGGGG-AGATTGCACTACTTAGTCAGCTTCAG 1100
Query 1715 CATCGGAATATTCTGCGATACCGTGGCACAGACAAGGACGGGTCAAATTTGTACATCTTT 1774
|||| ||||||| ||||||| |||||||||| |||||||| |||||| ||||||||||||
Sbjct 1101 CATCAGAATATTGTGCGATATCGTGGCACAGCCAAGGACGTGTCAAAATTGTACATCTTT 1160
Query 1775 CTTGAGCTTGTAACCCAAGGATCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGA- 1833
|||||||||||||||||||||||| ||| |||||||||| |||||||||| ||| | |
Sbjct 1161 CTTGAGCTTGTAACCCAAGGATCCGTTCAAAAACTCTACGAAAGATACCAACTTAGCTAC 1220
Query 1834 ATCTGTAGTGTCTTTGTACACAAAACAGATTCTTGAC-GGCTTGAAATATCTTCACGATA 1892
| | ||||| || ||||| |||| ||| ||||||| | || ||||| ||||| |||||||
Sbjct 1221 A-CAGTAGTCTCCTTGTATACAAGACAAATTCTTG-CTGGGTTGAATTATCTCCACGATA 1278
Query 1893 AAGGCTTTGTTCACAGGGACATCAAATGTGCAAATGTATTGGTGGACGCTAATGGCACCG 1952
|||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct 1279 AAGGCTTTGTTCACAGGGACATTAAATGTGCAAATATGTTGGTGGACGCTAATGGCACCG 1338
Query 1953 TCAAACTTGCAGATTTTGGATTGGCAAAGGTGTCCAAGTTAAACGACAGTAAATCCTGCA 2012
|||||||||||||||||||||||||| ||| ||| ||||| ||||||| || || ||||
Sbjct 1339 TCAAACTTGCAGATTTTGGATTGGCAGAGGCGTCAAAGTTCAACGACATTATGTCTTGCA 1398
Query 2013 AGGGAAC-TCCATTTTGGATGGCTCCGGAGGTTATTAACCCCAAGGGTAATGATGATGGC 2071
||||||| | ||||||||||||||||||||||||||||| |||| || | |||||||
Sbjct 1399 AGGGAACATT-ATTTTGGATGGCTCCGGAGGTTATTAACCGAAAGGATA--G-TGATGGC 1454
Query 2072 TATGGAAGTCCAGCTGATATATGGAGCCTTGGTTGCACTGTGCTAGAAATGTGTACCGGT 2131
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 1455 AATGGAAGTCCAGCTGATATATGGAGCCTTGGGTGCACTGTGCTGGAAATGTGTACTGGT 1514
Query 2132 CATATCCCCTACTTT-AGTCTAACACCCGTTCAAGCC-CAGATTAGGATCGAAAGGGGTA 2189
|| |||||||||| | ||||| |||| |||||||| | | ||| ||| | ||||||||
Sbjct 1515 CAGATCCCCTACTCCGA-TCTAAAACCCATTCAAGCCGC-GTTTAAGATTGGAAGGGGTA 1572
Query 2190 CGCTTCCAGACATACCTGATACTCTATTGCTAGATGCTCGAG-ATTTCATAGTTACATGT 2248
||||||||||| ||||||||||| ||| ||||| ||||| | |||||||| |||| |||
Sbjct 1573 CGCTTCCAGACGTACCTGATACTTTATCACTAGACGCTCG-GCATTTCATACTTACGTGT 1631
Query 2249 CTCAAAGTGAACCCCGAAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGT 2307
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1632 CTCAAAGTGAACCCGGAAGAGCGGCCAACTGCAGCTGAACTGCTGCACCATCCATTTGT 1690
Score = 115 bits (62), Expect = 2e-24
Identities = 92/107 (86%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 105 GTTCCTTCACTGATTCCGAGTCGACTTGTTCCTTTTTGACTCCCTCTATGGAGTTCCCGG 164
|||||| | || ||||||||||||||||||||| |||| || ||| ||||||||||||
Sbjct 487 GTTCCTCCGTTGGTTCCGAGTCGACTTGTTCCTTGATGACGCCTTCTCTGGAGTTCCCGG 546
Query 165 ATCGCATCAGTTTCCGGCAAATGGATTTGAGTGAAGCAGCTCCTAGT 211
||||||||||||||||| ||| |||||| |||||| || |||||||
Sbjct 547 ATCGCATCAGTTTCCGGAAAAAGGATTTCAGTGAAAAAGGTCCTAGT 593
Score = 113 bits (61), Expect = 7e-24
Identities = 83/94 (88%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 118 TTCCGAGTCGACTTGTTCCTTTTTGACTCCCTCTATGGAGTTCCCGGATCGCATCAGTTT 177
||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct 755 TTCCGAGTCGACTTGTTCCTTGATGACGCCTTCTATGGAGTTCCCGGATCGCATCAGTTT 814
Query 178 CCGGCAAATGGATTTGAGTGAAGCAGCTCCTAGT 211
||| ||| |||||| || |||| || |||||||
Sbjct 815 CCGAAAAAGGGATTTCAGCGAAGAAGGTCCTAGT 848
> AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein
kinase family protein | chr4:7201656-7209648 FORWARD LENGTH=5867
Length=5867
Score = 848 bits (459), Expect = 0.0
Identities = 849/1031 (82%), Gaps = 52/1031 (5%)
Strand=Plus/Plus
Query 1373 GAAGCCGGGGATGAAAAAGTGGAAACGGAAGAGACGGGAGATATGTTTATCCAAATGGAT 1432
|||||| |||| || |||||||||||||||||||||||| ||||||||||| | |||
Sbjct 4714 GAAGCCAGGGAAGAGGAAGTGGAAACGGAAGAGACGGGAGCTATGTTTATCCCATTGGGG 4773
Query 1433 GATACGACTGATGAGGCATGCTCATTCACTACAAATGAGTGTGACTCCTCAAGTTCAGTA 1492
|||| | | ||| |||||||||||||| ||| || ||||||||||||| || ||
Sbjct 4774 GATA--A--G--GAGACATGCTCATTCACTGTAAACAAGGGTGACTCCTCAAGGACAATA 4827
Query 1493 TCCAATACCTCGCCGATTTATGTCTCTGGAGGATCTATCAAT-ACTTCTTGGCAAAAGGG 1551
|| ||||| ||||||||||||| ||| | ||||||| || || || | |||||| |||||
Sbjct 4828 TCTAATACGTCGCCGATTTATGCCTCCGAAGGATCTTTC-ATCACGTGTTGGCAGAAGGG 4886
Query 1552 TCAACTTCTGCGACGAGGATCATTTGGCTCTGTGTATGAAGCCATTTCAGAAGATGGGCT 1611
|||||||||| ||||||||||||| || || || ||||||| |||||||| ||| |||
Sbjct 4887 TCAACTTCTGGGACGAGGATCATTAGGGTCCGTATATGAAGGCATTTCAGCAGACGGGGA 4946
Query 1612 CTTCTTTTCTGTCGAGGAAGTTTCACT-TTTAGATCAGGGAAGTCAGGCACAAGAATGCA 1670
||||||| || || ||||||||||||| || |||||||||||||||||||| ||||| |
Sbjct 4947 CTTCTTTGCTTTCAAGGAAGTTTCACTACTT-GATCAGGGAAGTCAGGCACATGAATGGA 5005
Query 1671 TACAACAACTTGA-GGGGGAAGTTGCACTACTTAGTCAGCTTGAGCATCGGAATATTC-T 1728
|||||||| | || ||||| | |||| ||||||||||||||| |||||| ||||| || |
Sbjct 5006 TACAACAAGTCGAGGGGGGGA-TTGCGCTACTTAGTCAGCTTCAGCATCAGAATA-TCGT 5063
Query 1729 GCGATACCGTGGCACAGAC-AAGGACGGGTCAAATTTGTACATCTTTCTTGAGCTTGTAA 1787
|||||| ||||||||| || ||||||| ||| ||||||||||| |||||||| |||||||
Sbjct 5064 GCGATATCGTGGCACA-ACTAAGGACGAGTCGAATTTGTACATTTTTCTTGAACTTGTAA 5122
Query 1788 CCCAAGGATCCCTTCTAAAACTCTACCAAAGATACCAGCTTCGGGAATCTGTAGTGTCTT 1847
||||||| ||||||| |||||||||||||||| |||||||| |||| |||||||| || |
Sbjct 5123 CCCAAGGGTCCCTTCGAAAACTCTACCAAAGAAACCAGCTTGGGGACTCTGTAGTCTCCT 5182
Query 1848 TGTACACAAAACAGATTCTTGACGGCTTGAAATATCTTCACGATAAAGGCTTTGTTCACA 1907
| ||||||| |||||||||||| || ||||||||||| ||||||||||| ||| | ||||
Sbjct 5183 TATACACAAGACAGATTCTTGATGGATTGAAATATCTCCACGATAAAGGTTTTATACACA 5242
Query 1908 GGGACATCAAATGTGCAAATGTATTGGTGGACGCTAATGGCACCGTCAAACTTGCAGATT 1967
|| |||| |||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct 5243 GGAACATTAAATGTGCAAATGTATTGGTGGACGCTAATGGAACAGTTAAACTTGCAGATT 5302
Query 1968 TTGGATTGGCAAAGGTGTCCAA-GTTAAAC-GACAGTAAATCCTGCAAGGGAACTCCATT 2025
|||||||||| ||||| || || | | | | || ||| | | |||| | |
Sbjct 5303 TTGGATTGGCTAAGGT----AATGTCCCTCTGGC-G-AACTCC-GTATTGGAA-T---T- 5350
Query 2026 TTGGATGGCTCCGGAGGTTATT---AACCCCAAGGGTAATGATGATGGCTATGGAAGTCC 2082
|||||||||| ||||||||| ||||| |||| | | ||||||| ||||||| |||
Sbjct 5351 --GGATGGCTCCAGAGGTTATTCTTAACCCGAAGGAT--T-ATGATGGTTATGGAACTCC 5405
Query 2083 AGCTGATATATGGAGCCTTGGTTGCACTGTGCTAGAAATGT-GTACCGGTCATATCCCCT 2141
||||||||||||||||||||| || |||||||||||||||| | || ||||| || ||||
Sbjct 5406 AGCTGATATATGGAGCCTTGGGTGTACTGTGCTAGAAATGTTG-ACTGGTCAGATTCCCT 5464
Query 2142 ACTTT-AGTCT--AACACCCGTTCAAGCCCAG-ATTAGGATCGAAAGGGGTACGCTTCCA 2197
||| | ||| || | | || || ||| | || | || | || ||||| ||||||
Sbjct 5465 ACTCCGA-TCTGGAA-ATCGGTACA-GCCTTGTATAAC-ATTGGAACGGGTAAGCTTCC- 5519
Query 2198 GACA-TACCTGATACTCTATTGCTAGATGCTCGAGATTTCATAGTTACATGTCTCAAAGT 2256
|| | ||||||||| ||||| |||||| || || ||||||||| |||| |||||||||||
Sbjct 5520 GAAAATACCTGATATTCTATCGCTAGACGCCCGGGATTTCATACTTACGTGTCTCAAAGT 5579
Query 2257 GAACCCCGAAGAGCGGCCAACTGCAGCTGAACTGCTGAACCATCCATTTGTGAGA-AGGC 2315
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||| | | ||
Sbjct 5580 GAACCCGGAAGAGCGGCCAACTGCAGCTGAGCTGCTTAACCATCCATTTGTGA-ATATGC 5638
Query 2316 CCTTACCATCGTCGGGCTCAGGATCAGCATCTCCGCTTATCCGCAGATGAGTCTAATTTT 2375
| |||||||| ||||||||||| |||| |||| |||| |||| |||||| ||||||||
Sbjct 5639 CATTACCATCCTCGGGCTCAGGTTCAGTATCTTCGCTCCTCCGTGGATGAGGCTAATTTT 5698
Query 2376 AGTAGATTGCC 2386
|| ||||||||
Sbjct 5699 AGAAGATTGCC 5709
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118473286200
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5