BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg942944 Length=278 Score E Sequences producing significant alignments: (Bits) Value AT4G20330.1 | Symbols: | Transcription initiation factor TFIIE... 121 4e-27 > AT4G20330.1 | Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982517-10984521 REVERSE LENGTH=1154 Length=1154 Score = 121 bits (65), Expect = 4e-27 Identities = 83/92 (90%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 32 GTTTAGTCCCGGGAACTGCTGGCGGTAAGGTTCTGGAAGAGCTCTGCAAGATGGACATTG 91 ||| ||| ||||||||||||| || ||||||||||||| ||||| | ||||||| ||||| Sbjct 990 GTTCAGTTCCGGGAACTGCTGCCGTTAAGGTTCTGGAAAAGCTCGGGAAGATGGGCATTG 931 Query 92 GTGAGTTTGGTTCTCTTGCTGATCTGTTGTTT 123 ||||||||||||||||||||||||| |||||| Sbjct 930 GTGAGTTTGGTTCTCTTGCTGATCTCTTGTTT 899 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12768008246 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5