BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg942978
Length=4447
Score E
Sequences producing significant alignments: (Bits) Value
AT4G11270.1 | Symbols: | Transducin/WD40 repeat-like superfami... 6342 0.0
> AT4G11270.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:6854364-6859664 FORWARD LENGTH=4612
Length=4612
Score = 6342 bits (3434), Expect = 0.0
Identities = 4133/4458 (93%), Gaps = 98/4458 (2%)
Strand=Plus/Plus
Query 6 GCTTGATTCGTGCCGATGAAGTGCCGATCCGTGGCCTGCCTCTGGTCTCGAGCTCCTCCA 65
||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 83 GCTTGATTCAAGCCGATGAAGTGCCGATCTGTGGCCTGCCTATGGTCTCGTGCTCCTCCG 142
Query 66 TCTCATCGAGTCACCGCCACAGCCTCTCTAACAAATCCACCGACTCTCTATACCGGTGGA 125
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 143 TCTCATCGGGTCACCGCCACAGCCTCTCTAACCAATCCACCGACTCTCTATACCGGTGGA 202
Query 126 TCCGATGGGTCAATCATCTGGTGGAGCATCTCGTCTTCTTCCGAGTCCAATTCGGTAACT 185
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 203 TCCGATGGGTCAATCATCTGGTGGAGCATCTCTTCTTCTTCCGAATCCAATTCTGTAACT 262
Query 186 CGTCTCTCGTCTTC-CGAGATTAAGCCGATTGCTATGTTGTGTGGCCATACTGCACCAAT 244
|||||| | || || |||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 263 CGTCTC-CCTCATCATGAGATTAAACCGATTGCTATGTTGTGTGGCCATACTTCACCAAT 321
Query 245 AGTGGATCTTGCCGTTTGTGATCCTAC--TACGGTTTCAGGGAACGGAGTTACATCAGAT 302
|||||||||||| ||||||||||||| ||| ||||| | || |||| | | | |
Sbjct 322 AGTGGATCTTGCTATTTGTGATCCTACAATAC--TTTCAAGTAATGGAG-T---T--G-T 372
Query 303 TG-TTCGGATAATGGTAACGCGGATCCGTTTGTTAACTGTTGTGCATTGATCAGTGCTTG 361
|| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 373 TGCATCAGATAATGGTAATGCGGATCCATTTGTTAACTGTTGTGCATTGATCAGTGCTTG 432
Query 362 TTCTGATGGTGTATTGTGTGTATGGAGTAGAAGTAGTGGTCATTGTAGGCGGCGTAGAAA 421
| |||||||||| ||||||||||||||||||||||||||||| |||||| || |||||
Sbjct 433 TACTGATGGTGTCTTGTGTGTATGGAGTAGAAGTAGTGGTCAGTGTAGGAAACGAAGAAA 492
Query 422 GTTACCTCCTTGGGTTGGAAGTCCGTCGATTTTGTGTACTTTGCCATCAGAGCCTAGATA 481
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 493 ATTACCTCCTTGGGTTGGAAGTCCATCGATTTTGTCTACTTTGCCATCAGAGCCTAGATA 552
Query 482 TGTATGTGTTGGGTGTTCTTATATTGATACTCAATCTGTTGATACTGTTGATGGGGCTGA 541
|||||||||||| ||||| | || | ||| | | |||||||||||||||
Sbjct 553 TGTATGTGTTGGTTGTTC------T--TA-T--ATC----G--A-TGTTGATGGGGCTGA 594
Query 542 GACTTTAGCAGATACTGATTTTCAGAACAGGAAACCGTCGAGGTGTACTGTGGTGGTTGT 601
|||||||||||||||||||||| || | || |||||| || || ||||| |||||
Sbjct 595 GACTTTAGCAGATACTGATTTT-----CA-G-AA--GTCGAGATGCACGGTGGTTGTTGT 645
Query 602 TGATACTTATACTCTTACGATTGTTCATACAGTTTTCCATGGGAATTTGTCTATTGGTTA 661
||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 646 TGATACTTACACTCTTACTATTGTTCATACAGTTTTCCATGGGAATTTATCTATTGGTTG 705
Query 662 TTTGAATTTTATGGGTGTGGTGCAATTGGAGGAGCAGGAATCGTTGCTTATGGCGGATTC 721
||||||||||||||| ||||| || || || ||||||||||| ||||||||||| |||||
Sbjct 706 TTTGAATTTTATGGGCGTGGTTCAGTTAGATGAGCAGGAATCATTGCTTATGGCTGATTC 765
Query 722 GTTTGGTAGGTTGCAGTTGGTTCCTGTGTCAGAGAATTCTGAGAAGGGTGAAGATGTATC 781
|||||||||||||||||||| | | |||| | || || | | | | |||
Sbjct 766 GTTTGGTAGGTTGCAGTTGG-T-C----TCAGTG---TC--AG-A----G-A-A---ATC 804
Query 782 TGAGTCGAGCAAAGGCTCTGTCGTGTCTAGGAACTGGTTAAATGAAGGGGAAATAGCTGT 841
||| |||||||||||||| | |||||||| |||||||| | |||||||||||| |||||
Sbjct 805 TGAACCGAGCAAAGGCTCTCTAGTGTCTAGAAACTGGTTGAGTGAAGGGGAAATTGCTGT 864
Query 842 ATCAGTGATAACCCGAGGGAAGCTTGTTGCTTTTTTCTCAAAGAATAGGTGTGTCTTTTG 901
|||||| ||||| |||||| | |||||||| |||||||| |||| |||||||||||||||
Sbjct 865 ATCAGTAATAACTCGAGGGGATCTTGTTGCGTTTTTCTCGAAGAGTAGGTGTGTCTTTTG 924
Query 902 GTTGTTGAATCGCGAGGAGGCAATAGGAGAGATATCTTTTGTTGATGATTCGCTTTGTTC 961
|||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 925 GTTGTTGAATCGCGAGGAGGCAATAGGAGAGATATCTTTTGTTGATGATT--C---G--C 977
Query 962 TGAAAATCATCCTCCAAATTTTCAT-TTCAAAGAAGCAATGATACTTTACTCTAGTACAT 1020
|| | || ||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 978 -----AT--T-CTTCAAATTTTC-TGTTCAAAGAAGCAATGATACTTTACTCTAGTACAT 1028
Query 1021 CAACTATCGAAGGTGATAAAGATGATAGAATTTCCGAAACTTTTGTGCTGTGGGATGATA 1080
||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||
Sbjct 1029 CAACTATTGAAGGTGATAAAGATGATAGTATTTCTGAAACTTTTGTGCTGTGGGATGGTA 1088
Query 1081 GTGGTTCAGCTGTGCTGTTTGTTATGTCATATATAGATGGAGATTTTACATATAAAAACC 1140
||||||| |||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct 1089 GTGGTTCTGCTGTGCTGTTTACTATGTCATATATAGATGGTGAATTTACATATAAAAACT 1148
Query 1141 TCGGTGAGATTGTTACTTCCCC---TGATAAGCGTTCCGTTAAATCAACGTTTTGTTTTG 1197
||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||
Sbjct 1149 TCGGTGAGATTGTTACTGCCCCTGATGATAAGCGTTCCGTGAAATCAACGTTTTGTTTTG 1208
Query 1198 TACAGTTGAGGCAGTATCTTCTTCGCGTTGAGTCTACCTGTTGTGATGTTGAACAACCTT 1257
| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1209 TTCAGTTGAGGCAGAATCTTCTTCGCGTTGAGTCTAGTTGTTGTGATGTTGAACAACCTT 1268
Query 1258 CTCAATGGAGGCCCCATATAACTG-TCTGGTCACTATGCCTAGGAGGAATAGGTAGTGAA 1316
|||| ||||||||||||||||| | |||||||| | ||||||||| ||| |||| |||
Sbjct 1269 CTCAGTGGAGGCCCCATATAAC-GATCTGGTCATTGTGCCTAGGA--AAT-GGTAAAGAA 1324
Query 1317 AAAGAACTTCAGCGCAAATTGCTTGGAGAAGGCTCCTATTTTGCTGATTGGATTTCAAGC 1376
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1325 AAAGAACTTCAGCGCAAAGTGCTTGGAGAAAGCTCCTATTTTGCTGATTGGATTTCAAGC 1384
Query 1377 TGTTGTTTAGATCCCACGGGCTCCATTAGTGCAGAAACTGGTATTTCCCATTTAGGAAGT 1436
| ||||||||||||| |||||| |||||||||||||||||| ||| || | |||||||
Sbjct 1385 TCCTGTTTAGATCCCAAGGGCTCGGTTAGTGCAGAAACTGGTACTTCGCAGTCAGGAAGT 1444
Query 1437 CAATGTC-GTACCGAAAATGGTCTACAAAGCTTTGTTAGTGACAATAGACAGTGCGTGTC 1495
|| || | || || |||||| ||||||||||||||||||||||||| ||||||| |||||
Sbjct 1445 CAGTG-CAGTGCCAAAAATGATCTACAAAGCTTTGTTAGTGACAATGGACAGTGTGTGTC 1503
Query 1496 ATCGTCCATGGTTATTTCTGAGAACT-TGTATGTCCCATATGCTGTTGTCTGTGGTTTCT 1554
|||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||
Sbjct 1504 ATCGTCCATGGTTATTTCTGAGAA-TATGTATGTCCCATATGCTGTTGTCTATGGTTTCT 1562
Query 1555 TTAGTGGTGAGATAGAAATTGCAAAGTTTGATTTTCTTCATGGACTTGATTCTCCTGCTT 1614
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1563 TTAGTGGTGAGATAGAGATTGCAAAGTTTGATTTTCTTCATGGAATTGATTCTCCTGCTT 1622
Query 1615 CAAGCCCTAGATCAGACACTGATTCACTCGTCTCTAGACAGCGTCTTTTGGGACATACAG 1674
||||||| |||||||| |||||| ||||||||| || ||||||||| |||||||||||||
Sbjct 1623 CAAGCCCGAGATCAGATACTGATCCACTCGTCTATAAACAGCGTCTATTGGGACATACAG 1682
Query 1675 GATCTGTTATATGCTTAGCAGCACATCGAATGTTTGGGGATGCAAATGGATGTAGTTCTT 1734
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1683 GATCTGTTCTATGCTTAGCAGCGCATCGAATGTTTGGGGATGCAAATGGATGTAATTCTT 1742
Query 1735 CTCATGTTTTGATCTCCGGAAGTATAGACTGTACCATCCGCATTTGGGATCTCGAAAGTG 1794
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1743 CTCATGTTTTGATCTCCGGAAGTATGGACTGTACCATCCGCATTTGGGATCTCGAAAGCG 1802
Query 1795 GAAATGTAATCATGATCATGCATCATCATGTTGCTCCGGTGCGCCAGATCATTCTAGCCC 1854
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1803 GAAATGTTATCATGATCATGCATCATCATGTTGCTCCAGTGCGCCAGATCATTCTATCCC 1862
Query 1855 CAGCTCGAACAGAACGCCCATGGAGCAATTGCTTTCTATCTGTTGGGGATGATTCATGTG 1914
|||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1863 CAGCTCCAACAAAACGCCCATGGAGCAAGTGCTTTCTATCTGTTGGGGATGATTCATGTG 1922
Query 1915 TTGCTCTTTCTTCTCTTGAGACTTTGCGTGTTGAAAGGATGTTTCCTGGGCACCCAAACT 1974
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1923 TTGCTCTTTCTTCTCTTGAGACTTTGCGGGTCGAAAGGATGTTTCCTGGGCACCCAAACT 1982
Query 1975 ATCCTACAAAAGTCGTATGGGATGGTACAAGAGGCTACATTGCATGTCTTTTCCGCTCCC 2034
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1983 ATCCTACAAAAGTTGTATGGGATGGTACAAGAGGCTACATTGCATGTCTTTTTCGCTCCC 2042
Query 2035 TTTCGAGAAAATCAGATCCAATTGATGTCTTGTACATTTGGGATGTGAAGACAGGTGCTC 2094
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2043 TTTCGAGAAAATCAGATCCAATTGATGTCTTATACATTTGGGATGTGAAAACAGGTGCTC 2102
Query 2095 GGGAACGTGTCCTCAATGGGGCAGCTTCACATTCGATGTTTGATCATTTCTGTGCAGGCA 2154
| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2103 GAGAACGTGTACTCCATGGGGCAGCTTCACATTCAATGTTTGATCATTTCTGTGCAGGCA 2162
Query 2155 TTAGTGAGAAATCTTATTCTGGCACTGTGTTAAATGGAAATACGTCAGTTTCTTCTTTGC 2214
|||||||||||||| ||||||| ||||| |||||||||||||| |||||||| |||||||
Sbjct 2163 TTAGTGAGAAATCTCATTCTGGTACTGTCTTAAATGGAAATACATCAGTTTCCTCTTTGC 2222
Query 2215 TTTTCCCAGTAGACGAAGAGAGGAAACCATTTTATTTGAAGAACTATGAGCGAGCAGCCT 2274
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2223 TTTTCCCAGTAGACGAAGAGAGGAAACCATTTTATTTGAAGAACTACGAGCGAGCAGCCT 2282
Query 2275 CTTTGTCAACATCTAAGCCAAGTGCTTCGCAGGAAAAGGCTAGAGAAGAGAGTTCTATTG 2334
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||
Sbjct 2283 CTTTGTCAACATCTAAGCCAAGTTCTTCGCAGGAAAAGACTAGAGAAGAGAGTTCTACTG 2342
Query 2335 CTTCGTCTTTTCTCCAAAGCATCAGATACCCTCCCATCAAATGCACTTGCCCATTCCCTG 2394
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2343 CTTCGTCTTTTCTCCAAAGCATCAGATACCCTTCCATCAAATGCACTTGCCCATTCCCTG 2402
Query 2395 GAATATCTACTCTGATTTTCGATCTTTCGTCTTTAGCAGTTTCTTGTCAAACACATGAAG 2454
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2403 GAATATCTACTCTGATTTTCGATCTTTCGTCTTTAGCAGTTTATTGTCAAACACATGAAG 2462
Query 2455 ACTCTGATATGCATAAGATGCTAGAAGAGAAGAGTGATAAGCCAACTGCTCAGCAGAAGA 2514
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2463 ACTCTGATATGCATAAGATGCTAGAAGAGAAGAGTGATAAGGCAACTGCTCAGCAGAAGA 2522
Query 2515 CTTCAAATGACAAGTCTCCTGTCCAGAAGACTCTAGATAACCCTGCAGAAGTTGTTCACA 2574
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2523 CTTCAAAAGACAAGTCTCCTGTCCAGAAGACTCTAGATAACCATGCAGAAGTTGTTCACA 2582
Query 2575 TGGACAAGGCAATTGGGGAATATCTAATTCGATTTAGTTTATCCTTTCTGCATTTGTGGG 2634
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 TGGACAAGGCTATTGGAGAATATCTAATTCGATTTAGTTTATCCTTTCTGCATTTGTGGG 2642
Query 2635 GTATAGATTCTGAACTCGATCAAATGCTAGTAGCACATCTAAAGCTAAAAAGACCAGAGA 2694
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2643 GTATAGATTTTGAACTCGATCAAATGCTAGTAGCACATCTAAAGCTAAAAAGACCAGAGA 2702
Query 2695 GTTTTATTGTAACCTCCGGTTTGCAGGGGGACAAAGGGTCATTGACATTAGCATTCCCGG 2754
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |
Sbjct 2703 GTTTTATTGTAACCTCCGGTTTGCAGGGAGACAAAGGATCATTGACATTAGCATTCCCTG 2762
Query 2755 GTTTGAATGCAACACTTGAGCTCTGGAAATCATCTTCGGAGTTTTCTGCGTTGAGGTCAG 2814
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2763 GTTTGAATGCAACACTTGAGCTCTGGAAATCATCTTCGGAGTTTACTGCGTTGAGGTCAG 2822
Query 2815 TGATGATGGTGTCGCTTGCTCAATGCATGATAAGTCTGTCACATTCCACTGCCACATATA 2874
|||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2823 TGATTATGGTGTCACTTGCTCAGTGCATGATAAGTCTGTCACATTCCACTGCCACATATA 2882
Query 2875 GCAGCAACTTGGCAGCATTCTACACACGAAATCTGGCTGAGAAATATCCAGATCTGAAGC 2934
|||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2883 GCAGCAACTTGGCAGCGTTCTACACGCGAAATCTGGCAGAGAAATATCCAGATCTGAAGC 2942
Query 2935 CACCATTACTCCAGCTTTTGGTAACTTTCTGGCAAGATAAAAGCGAACAAGTCCGTATGG 2994
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2943 CACCATTACTTCAGCTTTTGGTAACTTTCTGGCAAGATAATAGCGAACAAGTCCGTATGG 3002
Query 2995 CTGCTCGGTCATTATTCCACCACACTGCATCTTTGGCAATACCTCTTCCATTATGCAGTG 3054
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3003 CAGCTCGGTCATTATTCCACCACACTGCTTCTTTGGCAATACCTCTTCCATTATGCAGTG 3062
Query 3055 ATCACGCATCTGAACACACAAAACTGGTGAGATCCCTGTCTGGAATCAGTCTGAACGAAC 3114
|||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||
Sbjct 3063 ATCACGCATCTGAACATGCAGAACTGGTGAGATCCCTGTCTGGAATCAGTCTAAACGAAC 3122
Query 3115 CTAAAGTTCTTAGCACAGTGGAAGAACATCCCACAAACAGTGTGGACTCTGAGCATATCC 3174
|||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||
Sbjct 3123 CTAAAGTTCTTAGCACAGGGGAAGAATATCCCACAAACAGTCTGGACTCTGAGCATATCC 3182
Query 3175 ATCAAGCTCAACGGCTTTCTCAGGCTGAGGAGTCAGAACTACTCTCCTGGCTTGAATCTT 3234
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 3183 ATCAAGCTCAACGGCTTTCTCAGGCTGAGGAGTCAGAAATACTCTCATGGCTTGAATCTT 3242
Query 3235 TTGAAATGCAAGACTGGATTTCTTGCGTTGGGGGAACAAGTCAGGATGCAATGGCAGCTC 3294
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct 3243 TTGAAATGCAAGACTGGATTTCTTGTGTTGGGGGAACAAGTCAGGACGCAATGGCTGCTC 3302
Query 3295 ACATCATTGTTGCGGCTGCCTTATCAGTCTGGTACCCAAGTCTAGTAAAACCTGGTCTAG 3354
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3303 ACATCATTGTTGCGGCTGCCTTATCAATCTGGTACCCAAGTCTAGTAAAACCTGGTCTAG 3362
Query 3355 CCATGCTAGTCGTCCACAAATTGTTGAACCTTGTTATGGCCATGAGTGAGAAATACAGCT 3414
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3363 CCATGCTAGTCGTCCACAAATTGTTGAACCTGGTTATGGCCATGAGTGAGAAATACAGCT 3422
Query 3415 CGACTGCTGCGGAGCTTCTCTCAGAAGGAATGGAGACTACATGGAAAACATGGATCGGAC 3474
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3423 CGACTGCTGCGGAGCTTCTCTCAGAAGGAATGGAGACTACATGGAAAACATGGATTGGAC 3482
Query 3475 CTGACATTCCTCGGATAGTTTCAGACATATTTTTCCAAATAGAGTGTGTCAGTTCCTCAG 3534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3483 CTGACATTCCTCGGATAGTTTCAGACATATTTTTCCAAATAGAGTGTGTCAGTTCCTCAG 3542
Query 3535 TCGGAGCACATCAAGCTGTACCATCGTCTATAAAGGAGACTCTGGTCGAAATTCTTCTTC 3594
|||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 3543 TCGGAGCATATCAAGTTGTACCATCGTCTATAAAAGAGACTCTGGTCGAAGTTCTTCTTC 3602
Query 3595 CAAGTTTAGCCATGGCGGATGTCCTTGGATTTCTTAGCATAATAGAGAGCCAAATATGGT 3654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3603 CAAGTTTAGCCATGGCGGATGTCCTTGGATTTCTTAGCATAATAGAGAGCCAAATATGGT 3662
Query 3655 CTACAGCTTCTGATTCTCCTGTTCATGTAGTATCTCTCAGAACTCTCATCAGAATAATCC 3714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3663 CTACAGCTTCTGATTCTCCTGTTCATGTAGTATCTCTCAGAACTCTCATCAGAATAATCC 3722
Query 3715 GTGCTGCTCCAAGAAATCTGGTACTGCATCTTGAGAAGGTAGTTAATTTTGTTCTTCAAA 3774
| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 3723 GGGCTGCTCCTAGAAATCTGGTACTGCATCTTGAGAAGGCAGTTAACTTTGTTCTTCAAA 3782
Query 3775 CAATGGACCCAAGCAACACCGTCATGCGTAAAACTTGCCTGCAAACCTCAATGGCTACAC 3834
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3783 CGATGGACCCAAGCAACACCGTCATGCGTAAAACTTGCCTGCAAACCTCAATGGCTACGC 3842
Query 3835 TGAGAGAAGTTGTGCGTGTATTTCCAATGGTAATCCTAAACGATTCATCAACAAGGTTAG 3894
| |||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||
Sbjct 3843 TAAGAGAAGTTGTGCGCGTATTTCCAATGGTAATCTTAAACGACTCGTCAACAAGGTTAG 3902
Query 3895 CAATCGGTGATGCTATCACAGAGATCAACAATGCATGTATTCGCATATATGACATGCAAA 3954
||||||| |||| ||||||||||||||||||||||||||||| |||||| ||||||| ||
Sbjct 3903 CAATCGGCGATGTTATCACAGAGATCAACAATGCATGTATTCACATATACGACATGCGAA 3962
Query 3955 GTATGACAAAAATAAAGGTTTTAGATGCGAGTGGCCCTCCGGGTCTACCAAATTTTCTCA 4014
||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct 3963 GTATGACAAAAATAAGGGTTTTGGATGCGAGTGGACCTCCGGGTCTCCCAAATTTTCTCA 4022
Query 4015 GAG---CTTCGGAATCTGCAGTAACAACAGCTATATCAGCTCTCAGCTTTTCACCTGATG 4071
||| |||| |||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 4023 GAGGAGCTTCAGAATCTGCCGTGACAACAGCTATATCAGCTCTCAGCTTTTCACCTGATG 4082
Query 4072 GAGAGGGATTGGTTGCGTTTTCAGAAAACGGTTTGATGATCAGATGGTGGTCACTAGGAT 4131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4083 GAGAGGGATTGGTTGCGTTTTCAGAAAACGGTTTGATGATCAGATGGTGGTCACTAGGAT 4142
Query 4132 CGGTTTGGTGGGAGAAACTAAGCCGAAGTCTCACACCTGTTCAATGCACAAAACTGATAT 4191
|||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||
Sbjct 4143 CGGTTTGGTGGGAGAAACTAAGCCAAAGTCTCACACCTATTCAATGCACCAAACTAATAT 4202
Query 4192 TTATTCATCCATGGGATGGATTTTCATCAAACTCTTCACGAACAAGTGTGATCTCAAGTA 4251
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 4203 TTATCCATCCATGGGATGGATTTTCATCAAGCTCTTCACGAACAAGTGTGATCTCAAGTA 4262
Query 4252 TCAC-AAGCGACGAACAAGAACTTCCTCTTCAGGAAACCGCAAAGAACATAAGCCACGTA 4310
|| | || ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4263 TCTCTAA-CGACGAACAAGAACTTCCTCTTCAGGAAACCGCAAAGAACATAAGTCACGTA 4321
Query 4311 GAGCGGCTAAAGCAGCTTGTTCAGCATCTTGATCTCTCTTATCGCCTCGAATGGGCTAGT 4370
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 4322 GAGCGGCTAAAGCAACTTGTTCAACATCTTGATCTCTCTTATCGCCTCGAATGGGCCAGT 4381
Query 4371 GAACGCAAAGTAGTTCTAACTAGACACAGTGTTGAGTTGGGCACTTGCCTGTTGTGACAG 4430
||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||| ||||
Sbjct 4382 GAACGCAAAGTAGTTTTAACAAGACACAATGTCGAGTTGGGCACTTGCCTGTTGTAACAG 4441
Query 4431 CCA-GTGTAAGAATTCAG 4447
|| | |||||||| |||
Sbjct 4442 TCAAG-GTAAGAATCCAG 4458
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 221737888060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5