BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg943050

Length=1415
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G30910.1 | Symbols:  | Molybdenum cofactor sulfurase family ...   291    2e-77


> AT1G30910.1 | Symbols:  | Molybdenum cofactor sulfurase family 
protein | chr1:11000883-11002936 FORWARD LENGTH=1121
Length=1121

 Score =  291 bits (157),  Expect = 2e-77
 Identities = 236/271 (87%), Gaps = 17/271 (6%)
 Strand=Plus/Plus

Query  1112  TGG-GGTTAGAGCACCTGGTATGGATGCCCTTAAGGTTTCGTTAGCTAAACCGGACAAAA  1170
             ||| ||||||||| ||||||||||||||||||||||| ||  |||||||||| |||||||
Sbjct  313   TGGTGGTTAGAGCTCCTGGTATGGATGCCCTTAAGGTCTCCCTAGCTAAACCCGACAAAA  372

Query  1171  TAGCACATGGTGTCTCAGTTTGGGAGTGGTCTGGCTCTGCGCTTGACGAAGGAGATGAAG  1230
             ||||| | ||||||||||||||||||||||||||||| || || || |||||||| ||||
Sbjct  373   TAGCAGACGGTGTCTCAGTTTGGGAGTGGTCTGGCTCCGCACTAGATGAAGGAGAAGAAG  432

Query  1231  CATCTCAGTGGTTTACAGAtttttttGGGAAGCCTTGTCGACTT-TT-G----A-TTCAG  1283
             ||||||||||||||||| | ||| |||||||||||||||||||| || |    | |||||
Sbjct  433   CATCTCAGTGGTTTACAAACTTTGTTGGGAAGCCTTGTCGACTTGTTCGTTTTAATTCAG  492

Query  1284  ACTA-GA--C----C-TGTGGATCCAAATTATGCACCAGGTCACATTGCGATGTTCTCAG  1335
              ||| ||  |    | |||||||||||||||||| ||||||||||||||||||||||| |
Sbjct  493   CCTATGAGACTAGGCCTGTGGATCCAAATTATGCTCCAGGTCACATTGCGATGTTCTCGG  552

Query  1336  ATATGTATCCATTCTTGCTTTATATCACAGG  1366
             |||||||||||||||||||| ||||||||||
Sbjct  553   ATATGTATCCATTCTTGCTT-ATATCACAGG  582



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 69728557005


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5