BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg943132

Length=319
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706, ...   235    2e-61


> AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706, 
subfamily A, polypeptide 7 | chr4:7317560-7319739 REVERSE 
LENGTH=1854
Length=1854

 Score =  235 bits (127),  Expect = 2e-61
 Identities = 157/171 (92%), Gaps = 3/171 (2%)
 Strand=Plus/Plus

Query  147   ATTCATAGAAATCCGAATGTATGGGAGAATTTATTGGAGTTTAATCCGGATAGGTTTCTT  206
             ||||||||||||||||| ||||||||||||   |||||||||||||| ||||||||||||
Sbjct  1321  ATTCATAGAAATCCGAACGTATGGGAGAATCCGTTGGAGTTTAATCCTGATAGGTTTCTT  1380

Query  207   GATAAAAGTTGTGACTTTAGTGGTAATGACTATAGTTATTTCCCGTTTGGATCTGGCCGG  266
             |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1381  GATAAAGGTTACGACTTTAGTGGTAATGACTATAGTTATTTCCCGTTTGGATCTGGCCGG  1440

Query  267   AGAATTTGTACGGGA-TGGCCATGGCAGATATAA-TTGTTCTTTACAATCT  315
             ||||||||| ||||| |||||||||| || | || ||||||||||||||||
Sbjct  1441  AGAATTTGTGCGGGAATGGCCATGGCCGAGA-AAGTTGTTCTTTACAATCT  1490



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14828985955


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5