BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943136
Length=1137
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706, ... 1629 0.0
AT5G44620.1 | Symbols: CYP706A3 | cytochrome P450, family 706, ... 547 7e-155
> AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706,
subfamily A, polypeptide 7 | chr4:7317560-7319739 REVERSE
LENGTH=1854
Length=1854
Score = 1629 bits (882), Expect = 0.0
Identities = 1057/1142 (93%), Gaps = 10/1142 (1%)
Strand=Plus/Plus
Query 1 TTTCTAAATAAACAAGAAGCAATGACAGAAATTTTCACTTTCGTTACGATCCAAAATCGT 60
|||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct 61 TTTCTACATAAACAAGAACCAATGACAGATATTTTCACTTTCTTTACGATCCAAAATCGT 120
Query 61 AATGGCCACTTCAACATTGTTTTAGCTACAATAGTCATATCCTCTGTTTTTTGGTATATA 120
|||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AATGACCACTTCGACTTTGTTTTAGCTACAATAGTCATATCCTCTGTTTTTTGGTATATA 180
Query 121 TGGGTTTACACCAAATCCAAACGGCTGTTTCCACCGATACCGCCGGGACCTCGGGGTCTA 180
||||||||| |||||| ||||| |||||||||||| |||| |||||||||||||||||
Sbjct 181 TGGGTTTACGTCAAATCGAAACGACTGTTTCCACCGTTACCACCGGGACCTCGGGGTCTT 240
Query 181 CCCGTCGTCGGAAACCTCCCATTCCTCCACCCGGAGCTTCACACCTACTTTCACAGTCTA 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CCCATCGTCGGAAACCTCCCATTCCTCCACCCGGAGCTTCACACCTACTTTCACAGTCTA 300
Query 241 GCTCAAAAACACGGACCCGTTCTCAAACTATGGCTCGGGGCGAAACTAACCATCGTAATA 300
||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||
Sbjct 301 GCTCAAAAACACGGACCCGTTTTCAAACTATGGCTCGGCGCAAAACTAACCATCGTGATA 360
Query 301 ACCTCTTCTGAAGCCACACGCGAGATTCTAAGAACCAATGACGTCATCTTTGCGAACCAC 360
|||||||| ||||| || || || ||||||||||| ||||||||||||||||||||| ||
Sbjct 361 ACCTCTTCCGAAGCAACGCGGGATATTCTAAGAACTAATGACGTCATCTTTGCGAACGAC 420
Query 361 GACGTTCCCGTCGTAGGTTCGCTCAGCACGTACGGTGGCGTAGACATTGTCTGGTCACCG 420
||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct 421 GACGTTCCCGTCGCAGGCTCACTCAGCACGTATGGTGGCGTAGACATTGTCTGGTCACCG 480
Query 421 TACGGAACAGAATGGCGAATGCTGAGAAAAATCTGCATTAACAAAATGTTAAGCAACGCC 480
|||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 481 TACGGACCAGAATGGCCAATGCTAAGAAAAATCTGCATTAACAAAATGTTAAGCAACGCC 540
Query 481 ACGTTGGATTCAAATTCTTTCAATTTACTTCGCCGCCAGGAGACCAAGCGAACAGTCCGA 540
|||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||
Sbjct 541 ACGTTGGATTCAAATTCTTTTAGTGCACTTCGCCGCCAGGAGACCAGGCGAACAGTCCGG 600
Query 541 TATTTGGCAGACCGGGCTCGGGCCGGGTCTGCCG-TTAACGTTGGAGAACAAATATTTGT 599
|||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct 601 TATTTGGCAGACCGGGCTCGGGCCGGGT-TGGCGGTTAACGTTGGAGAACAAATATTTGT 659
Query 600 CACGATATTAAATGTGGTGATCACTCAGATGTTGTGGGGAGCTACGGTTGCGGATGGA-G 658
|||||||||||||||||||| | ||||||||||||||||| || |||||||| | | |
Sbjct 660 CACGATATTAAATGTGGTGA-C--TCAGATGTTGTGGGGAGAAACTGTTGCGGACG-ACG 715
Query 659 AGGAGAGAGATAGTGTTGGAGCTGAGTTCTTGGAACTGATTACG-A--TAATTGATGTTG 715
|||||||||| | ||||||||||| || |||||| |||||||| | ||||||||||||
Sbjct 716 AGGAGAGAGAGAAAGTTGGAGCTGAATTTTTGGAATTGATTACGGAAATAATTGATGTTG 775
Query 716 TCGGAAAGCCGAATGTCTCTGAtttttttCCGGTTTTGAGCCGGTTTGATCTTCAGGGTT 775
| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 776 TGGGAAAGCCAAATGTCTCTGATTTTTTCCCGGTTTTGAGCCGGTTTGACCTTCAGGGTT 835
Query 776 TGGCTAAGCGTGTGCGTGGATCGGCTCAGAGGATGGACCAGATGTTCGACCGGATTATAA 835
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 836 TGGCTAAGCGTGTGCGTAGATCGGCTCAGAGGATGGACCGGATGTTCGACCGGATTATAA 895
Query 836 ATCAACGGGTTAGAATGGATAAGGGAAGTAAAGGGAACGGCGTAGATTTTTTGATGGTTT 895
||||||| | |||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 896 GTCAACGGATGGGAATGGATAAGGGAAGTAAAGGGAACGGTGGAGATTTTTTGATGGTTT 955
Query 896 TGTTGAATGCTAAGGAAGAAGATGAAAACATGTCCATGAACCATGTCAAGGCCTTCCTTA 955
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct 956 TGTTGAATGCTAAGGATGAAGATGAAAACATGTCCATGAACCATGTCAAGGCCTTGCTAA 1015
Query 956 TGGACATGGTGCTTGGTGGTACAGACACATCTTTGAACACAATAGAGTTCGCAATGGCAG 1015
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TGGATATGGTGCTTGGTGGTACAGACACATCTTTGAACACAATAGAGTTCGCAATGGCAG 1075
Query 1016 AGCTTATAAACAAACCGGAGATCATGAAGAAAGCTCAACAAGAGCTCGACAAAGTTGTGG 1075
||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||
Sbjct 1076 AGCTTATAAACAAACTGGAGATCATGAAGAGAGCTCAACAAGAGCTTGACAAGGTTGTGG 1135
Query 1076 GTAAAAATAACATCGTAGAAGAAACACATATCACTTAACTTCCATACATTCTCTCCATTA 1135
| ||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1136 GGAAAAACAACATCGTCGAAGAAAAACATATCACTAAACTTCCATACATTCTCTCCATTA 1195
Query 1136 TG 1137
||
Sbjct 1196 TG 1197
> AT5G44620.1 | Symbols: CYP706A3 | cytochrome P450, family 706,
subfamily A, polypeptide 3 | chr5:17997779-17999558 REVERSE
LENGTH=1708
Length=1708
Score = 547 bits (296), Expect = 7e-155
Identities = 889/1163 (76%), Gaps = 89/1163 (8%)
Strand=Plus/Plus
Query 21 AATGACAGAAATTTTCACTTTCGTTACG-ATCCAAAATCGTAATGG-CC-ACTTCAACAT 77
||||||||| |||| || | || ||| | | || || ||| || || || |||| || |
Sbjct 19 AATGACAGACATTTCCAGTCTCTTTA-GAAACCGAAGTCGCAA-GGACCAACTT-GAC-T 74
Query 78 -TGTTTTAGCTACAATAGTCATATCCTCTGTTTTTTGGTATATATGGGTTTACACCAAAT 136
|| |||| || ||||| ||||| || ||| ||||| | | ||| | ||| ||||||
Sbjct 75 ATGGTTTAACTGTGATAGTTATATCAACTCTTTGTTGGTGTCTTTGGCTCTACGCCAAAT 134
Query 137 CCAAACGGCTGTTTCCACCGATACCGCCGGGACCTCGGGGTCTACCCGTCGTCGGAAACC 196
|||||||| || ||||||| | |||||||||||| |||| || ||| | |||||||||
Sbjct 135 GCAAACGGCGGTCTCCACCGTTGCCGCCGGGACCTTGGGGCCTTCCCATTATCGGAAACC 194
Query 197 TCCCATTCCTCCACCCGGAGCTTCACACCTACTTTCACA-GTCTAGCTCAAAAA-CACGG 254
| ||||||||||| |||||||||||||||||||| || | | || ||| ||||| |||||
Sbjct 195 TTCCATTCCTCCAACCGGAGCTTCACACCTACTTCCA-AGGGCTGGCT-AAAAAGCACGG 252
Query 255 ACCCGTTCTCAAACTATGGCTCGGGGCGAAACTAACCATCGTAATAACCTCTTCTGAAGC 314
||| || ||||||| ||||||||||| || || || ||||| | |||||||||||||
Sbjct 253 TCCCATTTTCAAACTCTGGCTCGGGGCCAAGCTCACAATCGTGGTCACCTCTTCTGAAG- 311
Query 315 CACACGC--GAGATTCT-AAGAACCAATGACGTCATCTTTGCGAACCACGACGTTCCCGT 371
| ||| |||||||| || ||| |||||| ||||||| ||||||||||| | |||| |
Sbjct 312 TA-GCGCAAGAGATTCTCAA-AACGAATGACATCATCTTCGCGAACCACGATG-TCCC-T 367
Query 372 -C-GTAGGTTC-GCTCAGCACGTACGGTGG--CGTAGA-CATTGTCTGGTCACCGTACGG 425
| || || | | | | |||||| ||||| || ||| || | | ||||| ||||| ||
Sbjct 368 GCTGTGGGCCCTG-TTAACACGTATGGTGGTACGGAGATCA-T-T-TGGTCGCCGTATGG 423
Query 426 AACAGAA-TGGCGAATGCTGAGAAAAATCTGCATTAACAAAATGTTAAGCAACGCCACGT 484
| || || ||||| |||||||| || | || |||| | || | || ||||||| ||
Sbjct 424 ACCA-AAGTGGCGGATGCTGAGGAAGCTATGTGTTAATAGGATACTGAGAAACGCCATGT 482
Query 485 TGGATTCAAATTCTTTCAATTTA-CTTCGCCGCCAG-GAGAC-CAAGCGAACAGTCCGAT 541
||||||| | || | | | || || |||| | ||||| | || ||| ||||| |
Sbjct 483 TGGATTC-----C--TCCACTGACCTCCGTCGCC-GAGAGACTC-GGCAAACCGTCCGGT 533
Query 542 ATTTGGCAGACCGGGCTCGGGCCGGGTCTGCC-GTTAACGTTGGAGAACAAATATT-TGT 599
||||||| |||| |||||||| ||| || || |||||| | |||||||||||||| | |
Sbjct 534 ATTTGGCGGACCAGGCTCGGGTCGGTTC-ACCAGTTAACCTGGGAGAACAAATATTCT-T 591
Query 600 CACGATATTAAATGTGGTGATCACTCAGATGTTGTGGGGAGCTACGGTTGCGGATGGAGA 659
| ||| || ||||| || | || |||||| | |||||| | |||||| ||| | |||
Sbjct 592 GATGATGTTGAATGT--TG-TGACGCAGATGCTATGGGGAACAACGGTTAAGGAAGAAGA 648
Query 660 GGAGAGAGATAGTGTTGGAGCTGAGTTCTTGGAACTGATTACGATA-ATTG-ATGTTGT- 716
||| ||| | ||||||||| |||||||| || |||||| || | | || | | |
Sbjct 649 -GAGGGAGGT--TGTTGGAGCCGAGTTCTTAGAGGTGATTA-GAGAGA-TGAACGACCTC 703
Query 717 C-G-GAAAGCCGAATGTCTCTGAtttttttCCGGTTTTGAGCCGGTTTGATCTTCAGGGT 774
| | | ||| ||| |||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct 704 CTGCTAGTGCCCAATATCTCCGACTTTTTCCCGGTATTGAGCCGGTTTGATCTTCAGGGT 763
Query 775 TTGGCTAAGCGTGTGCGTGGATCGGCTCAGAGGATGGACCAGATGTTCGACCGGATTATA 834
|||||||||||| |||| || ||||||| || ||||| ||||||||||||||||| ||
Sbjct 764 TTGGCTAAGCGTATGCGAAGACCGGCTCAAAGAATGGATCAGATGTTCGACCGGATCATT 823
Query 835 AATCAACGGGTTAGA-ATGGATAAGGGA-AGTAA--A-GGGA-ACGGC-GTAGATTTTTT 887
|| |||||| || | ||||||| |||| |||| | |||| | | | || |||||| |
Sbjct 824 AACCAACGG-TTGGGGATGGATA-GGGACAGTAGTGACGGGAGA-G-CTGTGGATTTTCT 879
Query 888 -GATGGTTTTGTTGAATG-CTAAGGAAGAAGA---TGAAAA--C-ATGT---CCATGAAC 936
|| | | |||||||| | | ||||| ||||| |||||| | | || ||||||||
Sbjct 880 AGACG-TCTTGTTGAAAGTC-AAGGATGAAGAAGCTGAAAAGACGAAGTTGACCATGAAC 937
Query 937 CATGTCAAGGCCTTCCTTATGGACATGGTGCTTGGTGGTACAGACACATCTTTGAACACA 996
||||||||||| | || |||||||||||||| ||||||||||||||||| || || |
Sbjct 938 GATGTCAAGGCCGTACTCATGGACATGGTGCTCGGTGGTACAGACACATCACTGCACGTA 997
Query 997 ATAGAGTTCGCAATGGCAGAGCTTATAA-ACAAACCGGAGATCATGAAGAAAGCTCAACA 1055
||||| ||||| ||||| ||||| || | |||| || || |||||||||| |||||||||
Sbjct 998 ATAGAATTCGCGATGGCCGAGCT-ATTACACAACCCCGATATCATGAAGAGAGCTCAACA 1056
Query 1056 AGAGCTCGACAAAGTTGTGGGTAAA-AATAACATCGTAGAAGAAACACATATCACTTAAC 1114
|||| | |||||||||||||| ||| || || | || |||||| | || ||| || |||
Sbjct 1057 AGAGGTTGACAAAGTTGTGGGAAAAGAAAAAGTT-GTGGAAGAATCTCACATCTCTAAAC 1115
Query 1115 TTCCATACATTCTCTCCATTATG 1137
|||||||||||||| ||||||||
Sbjct 1116 TTCCATACATTCTCGCCATTATG 1138
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55772805495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5