BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943210
Length=2359
Score E
Sequences producing significant alignments: (Bits) Value
AT4G04340.2 | Symbols: | ERD (early-responsive to dehydration ... 3720 0.0
AT4G22120.1 | Symbols: | ERD (early-responsive to dehydration ... 2156 0.0
> AT4G04340.2 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr4:2122908-2126844 FORWARD LENGTH=2790
Length=2790
Score = 3720 bits (2014), Expect = 0.0
Identities = 2244/2355 (95%), Gaps = 15/2355 (1%)
Strand=Plus/Plus
Query 4 AGCAAAAGTGACAAATCATGGCAACACTTCAAGACATTGGTGTATCAGCAGGGATAAACA 63
||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 235 AGCAAAAGTAACAAAGCATGGCAACACTTAAAGACATTGGTGTATCAGCAGGGATAAACA 294
Query 64 TCCTCACTGCATTCATTTTCTTCATTATCTTTGCTTTTTTAAGACTTCAGCCATTCAACG 123
||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 295 TCCTCACTGCATTCATTTTCTTCATAATCTTTGCGTTTTTAAGGCTTCAGCCATTCAACG 354
Query 124 ACAGAGTTTACTTCTCGAAATGGTACCTCAAGGGGTTAAGAAGCAGCCCTGCAAGTGGCG 183
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 355 ACAGAGTTTACTTCTCCAAATGGTACCTCAGGGGGTTAAGAAGCAGCCCTGCAAGTGGCG 414
Query 184 GTGGATTCGCGGGGCGGTTTGTGAATTTGGACTTGAGATCATACCTCAAGTTCTTGCATT 243
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 415 GCGGATTCGCGGGGCGGTTTGTGAATTTGGAGTTGAGATCATACCTCAAGTTCTTGCATT 474
Query 244 GGATGCCTGAAGCTCTCAAGATGCCTGAGCGTGAGCTTATTGATCATGCTGGTTTAGACT 303
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 475 GGATGCCTGAAGCTCTTAAGATGCCTGAGCGTGAGCTGATTGATCATGCTGGTTTAGACT 534
Query 304 CTGTTGTCTATCTCCGGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGC 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 CTGTTGTCTATCTCCGGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGC 594
Query 364 TTGCTTGGGCAGTTCTTGTACCGGTTAATTGGACGAACAACGAGTTGGAGTTGGCTAAGC 423
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 595 TTGCTTGGGCAGTTCTTGTACCGGTTAATTGGACAAACAACGAGTTGGAGTTGGCTAAGC 654
Query 424 ATTTAAAGAATGTTACTTCAAGTGATATCGACAAGCTAACAATTTCAAATATCCCAGA-G 482
|||| |||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct 655 ATTTTAAGAATGTGACTTCAAGTGATATTGACAAACTAACAATTTCGAATATCCCAGAAG 714
Query 483 TCTTCACATAGGTTTTGGGCTCACATTGTAATGGCTTACGCCTTCACAATCTGGACTTGT 542
|||| |||||||||||||||| || |||||||||| ||||| |||||||||||||||
Sbjct 715 G-TTCAAATAGGTTTTGGGCTCATATCATAATGGCTTATGCCTTTACAATCTGGACTTGT 773
Query 543 TATATGTTGATGAAGGAGTATGAGACAGTTGCTAATATGAGGCTTCAGTTTGTTGCCTCA 602
|||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 774 TATATGCTGATGAAGGAGTATGAGACAGTTGCTAACATGAGGCTTCAGTTTCTTGCCTCA 833
Query 603 GAAGCCCGTCGACCTGACCAGTTTACTGTTCTTGTTAGGAATGTACCTCCGGACCCCGAC 662
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 834 GAAGGCCGTCGACCTGACCAGTTCACTGTTCTTGTTAGGAATGTACCTCCGGACCCAGAC 893
Query 663 GAAACTGTGAGTGAGCTTGTGGAGCATTTTTTCCTAGTCAATCACCCTGATAACTACCTC 722
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 894 GAAACTGTGAGTGAGCTTGTGGAGCATTTTTTCCTAGTTAATCACCCTGATAACTACCTC 953
Query 723 ACACATCAGGTTGTATACAACGCAAACAAGCTCGCCGATTTGGTTAGTAAAAAGAAGAAG 782
|||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct 954 ACACATCAGGTTGTATGCAATGCAAACAAGCTCGCGGATTTGGTTAGTAAAAAGACGAAG 1013
Query 783 CTGCAGAATTGGCTTGACTACTATCAGCTCAAATACACTAGAAATAACTCTCAGACCAGA 842
|||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct 1014 CTGCAGAACTGGCTTGACTATTATCAGCTCAAATACACTAGAAATAATTCTCAGATCAGA 1073
Query 843 CCTATTACGAAGCTTGGTTGCCTTGGCTTGTGTGGACAAAAAGTTGACGCAATCGAACAT 902
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 CCTATAACGAAGCTTGGGTGCCTTGGCTTGTGTGGACAAAAAGTTGACGCAATCGAACAT 1133
Query 903 TACATTGCTGAAGTTGATAAAACATCAAAAGAGATTGCTGAAGAGAGGGAGAATGTGGTG 962
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1134 TACATTGCTGAAGTAGATAAAACATCAAAAGAGATTGCTGAAGAGAGAGAGAATGTGGTG 1193
Query 963 AATGATCAAAAGTCAATCATGCCAGCGTCTTTTGTCTCCTTCAAAAACCGTTGGGCTGCT 1022
||||||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||
Sbjct 1194 AATGATCAAAAGTCAGTCATGCCAGCATCTTTTGTCTCTTTCAAAACCCGTTGGGCTGCT 1253
Query 1023 GCTGTTTGCGCTCAGACCACACAGACCCGAAACCCAACCGAATGGCTAACCGAATGGGCT 1082
|||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct 1254 GCTGTTTGCGCTCAGACCACGCAGACCCGAAACCCAACTGAATGGTTAACCGAATGGGCT 1313
Query 1083 GCAGAGCCGCGTGATGTGTATTGGCCAAACCTTGCGATTCCATATGTTTCTTTGACTGTA 1142
||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1314 GCAGAGCCGCGTGATATATATTGGCCAAACCTAGCGATTCCATATGTTTCTTTGACTGTG 1373
Query 1143 AGAA-ATTTGGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCCCTAT 1201
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 AGAAGATT-GGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCCCTAT 1432
Query 1202 CGCGTTTGTACAATCTCTTGCTACCGTTGAGGGAATTGAGAAAGTTGCGCCGTTCTTGAA 1261
||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||
Sbjct 1433 CGCGTTTGTACAATCTCTTGCTACCATTGAAGGAATTGAGAAAGTTGCACCGTTCTTGAA 1492
Query 1262 AGTCATTATCGAAGATAA-ATTTG-TAAAATCGCTGATACAAGGTCTGCTAGCCGGTATT 1319
||||||||||||| | || |||| |||||||||||||||||||| ||||||||||||||
Sbjct 1493 AGTCATTATCGAA-A-AAGATTTCATAAAATCGCTGATACAAGGTTTGCTAGCCGGTATT 1550
Query 1320 GTGCTGAAGCTTTTCCTCATCTTTCTGCCAGGCATACTGATGACCATGTCCAAATTTGAA 1379
| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1551 GCGTTGAAGCTTTTCCTCATCTTTCTGCCAGCCATACTGATGACCATGTCCAAATTTGAA 1610
Query 1380 GGCTTTACTTCAGTTTCATCCTTAGAAAGACGATCCGCGTCTAGATATTACATCTTTAAC 1439
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1611 GGCTTTACTTCAGTTTCATTCTTAGAAAGACGATCCGCGTCTAGATATTACATCTTTAAC 1670
Query 1440 TTAGTGAACGTCTTTCTTGGAAATGTTATCGCTGGAGCTGCGTTTGAGCAGCTTAACTCT 1499
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1671 TTAGTGAACGTCTTTCTTGGAAGTGTTATCGCTGGAGCTGCGTTTGAGCAGCTTAACTCT 1730
Query 1500 TTCCTCAATCAGTCGCCTAATCAAATCCCTAAGACAATTGGCATGGCGATACCGATGAAA 1559
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1731 TTCCTCAATCAATCGCCTAATCAAATCCCTAAGACTATTGGCATGGCGATACCGATGAAA 1790
Query 1560 GCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 GCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATT 1850
Query 1620 CTTATGTTAAAACCTCTCATTATATACCACCTCAAAAACGCACTCTTGGTGAAAACAGAG 1679
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1851 CTTATGTTGAAACCTCTCATTATATACCACCTCAAAAACGCATTCTTGGTGAAAACAGAG 1910
Query 1680 AAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAGAGCCTCAG 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1911 AAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAGAGCCTCAG 1970
Query 1740 ATACAGCTTTACTTCCTTCTCGGTCTTGTCTATGCTCCCGTGACACCAATGCTTCTTCCT 1799
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1971 ATACAGCTTTACTTCCTTCTTGGTCTTGTCTATGCTCCTGTGACACCAATGCTTCTTCCT 2030
Query 1800 TTTATCTTAATCTTCTTT-GCGCTTGCTTACGTCGTATATCGCCATCAGATCATAAATGT 1858
||||||||| |||| ||| || |||||||| |||||||| ||||||||||||||||||||
Sbjct 2031 TTTATCTTAGTCTT-TTTCGCTCTTGCTTATGTCGTATACCGCCATCAGATCATAAATGT 2089
Query 1859 GTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCAGATGTTCATGGACGGGTTAT 1918
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2090 GTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCGGATGTTCATGGACGGGTTAT 2149
Query 1919 AACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGATAGGTACAAAACATGCCGC 1978
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2150 AACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGTTAGGTACAAAACATGCCGC 2209
Query 1979 TTTAGCTGCACCGTTTCTCATCGCTCTTCCCGTGATTACCATCAGTTTCCACCGCTTCTG 2038
|| |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct 2210 TTCAGCTGCTCCGTTTCTCATTGCTCTTCCTGTGATTACTATCGGTTTCCACCGCTTCTG 2269
Query 2039 TAAAGGCCGTTAT-GAACCCGCCTTTATCCGATACCCCTTACAGGAAGCTATGATGAAAG 2097
||||||||||| | ||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct 2270 TAAAGGCCGTT-TCGAACCTGCCTTTGTCCGTTACCCCTTACAGGAAGCTATGATGAAAG 2328
Query 2098 ATACATTGGAAAGAGCAAGAGAGCCTAATCTGAACCTGAAAGGTTACTTGCAAGACGCTT 2157
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2329 ATACATTGGAAAGAGCAAGAGAGCCAAATCTGAACCTGAAAGGTTACTTGCAAGACGCTT 2388
Query 2158 ATATTCATCCTGTTTTCAAAGGCGGTGAT---GACGACGACGGTGACATGATTGGAAAAT 2214
|||||||||| ||||| |||||||||||| || ||||||||||||||||| |||||||
Sbjct 2389 ATATTCATCCGGTTTTTAAAGGCGGTGATAATGATGACGACGGTGACATGATCGGAAAAT 2448
Query 2215 TGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGGAACACTCCCGCGC 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2449 TGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGGAACACTCCTGCAC 2508
Query 2275 CAAGCCGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAACGGTAAAGAAGTCT 2334
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 CGAGCAGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAACGGTAAAGAAGTCT 2568
Query 2335 AGTTTAACTGTTTCA 2349
|||||||| ||||||
Sbjct 2569 AGTTTAACGGTTTCA 2583
> AT4G22120.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr4:11715824-11719792 REVERSE LENGTH=2819
Length=2819
Score = 2156 bits (1167), Expect = 0.0
Identities = 1926/2293 (84%), Gaps = 49/2293 (2%)
Strand=Plus/Plus
Query 21 ATGGCAACACTTCAAGACATTGGTGTATCAGCAGGGATAAACATCCTCACTGCATTCATT 80
||||| |||||||| || |||||||||||||| ||||||||||| |||| ||| || ||
Sbjct 352 ATGGCGACACTTCAGGATATTGGTGTATCAGCTGGGATAAACATTCTCAGTGCCTTTGTT 411
Query 81 TTCTTCATTATCTTTGCTTTTTTAAGACTTCAGCCATTCAACGACAGAGTTTACTTCTCG 140
|||||||| |||||||| |||| || |||||||| ||||| || ||||||||||||||
Sbjct 412 TTCTTCATAATCTTTGCGGTTTTGAGGCTTCAGCCTTTCAATGATAGAGTTTACTTCTCA 471
Query 141 AAATGGTACCTCAAGGGGTTAAGAAGCAGCCCTGCAAGTGGCGGTGGATTCGCGGGGCGG 200
|||||||| |||||||||||||||||||||||||| |||| || | || ||| | ||
Sbjct 472 AAATGGTATCTCAAGGGGTTAAGAAGCAGCCCTGCTCGTGGTGGCGCCTTTGCGCAGAGG 531
Query 201 TTTGTGAATTTGGACTTGAGATCATACCTCAAGTTCTTGCATTGGATGCCTGAAGCTCTC 260
|||||||| ||||||| || || || | ||||||||| |||||||||| || |||||
Sbjct 532 TTTGTGAACCTGGACTTCAGGTCTTATATGAAGTTCTTGAATTGGATGCCAGAGGCTCTG 591
Query 261 AAGATGCCTGAGCGTGAGCTTATTGATCATGCTGGTTTAGACTCTGTTGTCTATCTCCGG 320
||||||||||||| |||||||||||||||||||||||| || || ||||| |||||||||
Sbjct 592 AAGATGCCTGAGCCTGAGCTTATTGATCATGCTGGTTTGGATTCAGTTGTTTATCTCCGG 651
Query 321 ATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGCTTGCTTGGGCAGTTCTT 380
||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct 652 ATTTACTGGCTGGGGCTTAAGATCTTTACTCCAATAGCAGTGCTTGCTTGGGCAGTTCTT 711
Query 381 GTACCGGTTAATTGGACGAACAACGA-GTTGGAGTTGGCTAAGCATTTAAAGAATGTTAC 439
|| || || || ||||| || ||| | |||||| |||||||||| |||| |||||| ||
Sbjct 712 GTGCCAGTCAACTGGACTAATAAC-ACATTGGAGATGGCTAAGCAGTTAAGGAATGTAAC 770
Query 440 TTCAAGTGATATCGACAAGCTAACAATTTCAAATATCCCAGAGTCTTCACAT-AGGTTTT 498
||| || || || ||||| || | |||||||||| ||||||| |||| || |||||||
Sbjct 771 TTCGAGCGACATTGACAAACTCTCTGTTTCAAATATTCCAGAGTATTCA-ATGAGGTTTT 829
Query 499 GGGCTCACATTGTAATGGCTTACGCCTTCACAATCTGGACTTGTTATATGTTGATGAAGG 558
|| |||| || ||||||||||| ||||| || ||||||||||||||| || ||||||| |
Sbjct 830 GGACTCATATAGTAATGGCTTATGCCTTTACCATCTGGACTTGTTATGTGCTGATGAAAG 889
Query 559 AGTATGAGACAGTTGCTAATATGAGGCTTCAGTTTGTTGCCTCAGAAGCCCGTCGACCTG 618
| ||||||||| ||||||| |||||||| ||||||||||| |||||||| ||||||||||
Sbjct 890 AATATGAGACAATTGCTAACATGAGGCTCCAGTTTGTTGCATCAGAAGCTCGTCGACCTG 949
Query 619 ACCAGTTTACTGTTCTTGTTAGGAATGTACCTCCGGACCCCGACGAAACTGTGAGTGAGC 678
||||||| ||||| |||||||||||||||||||||||| | || ||| |||| ||||| |
Sbjct 950 ACCAGTTCACTGTCCTTGTTAGGAATGTACCTCCGGACGCAGATGAATCTGTAAGTGAAC 1009
Query 679 TTGTGGAGCATTTTTTCCTAGTCAATCACCCTGATAACTACCTCACACATCAGGTTGTAT 738
| || |||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||
Sbjct 1010 TGGTAGAGCATTTTTTCCTGGTCAATCATCCTGATCACTACCTAACACATCAGGTTGTAT 1069
Query 739 ACAACGCAAACAAGCTCGCCGATTTGGTTAGTAAA-AAGAAGAAGCTGCAGAATTGGCTT 797
||| ||||||||||| ||||||||||| | ||| ||||| ||||||||||||||||||
Sbjct 1070 GCAATGCAAACAAGCTGGCCGATTTGGTGA-AAAAGAAGAAAAAGCTGCAGAATTGGCTT 1128
Query 798 GACTACTATCAGCTCAAATACACTAGAAATAACTCTCAGACCAGACCTATTACGAAGCTT 857
|| ||||| |||||||||||| |||| |||||||||||| ||| ||| |||||||
Sbjct 1129 GATTACTACCAGCTCAAATACGCTAGGAATAACTCTCAG---AGAATTATGGTGAAGCTT 1185
Query 858 GG-TTGCCTT-GGCTTGTGTGGACAAAAAGTTGACGCAATCGAACATTACATTGCTGAAG 915
|| || ||| ||| | || ||||||||||| || || || ||||||||||||||||||
Sbjct 1186 GGCTT-TCTTGGGC-TATGGGGACAAAAAGTCGATGCCATTGAACATTACATTGCTGAAA 1243
Query 916 TTGATAAAACATCAAAAGAGAT-TGCTGAAGAGAGGGA-GAATGTGGTGAATGATCAAAA 973
|||| |||| |||||||||||| | | |||| || || ||| ||||||||||||| ||
Sbjct 1244 TTGACAAAATATCAAAAGAGATCAG-TAAAGAAAGAGAGGAA-GTGGTGAATGATCCTAA 1301
Query 974 GTCAATCATGCCAGC-GTCTTTTGTCTCCTTCAAAAAC-CGTTGGGCTGCTGCTGTTTGC 1031
| | || |||||||| | | ||||||||||| ||||| || ||||||||||| |||||
Sbjct 1302 GGCCATTATGCCAGCAG-CGTTTGTCTCCTT-TAAAACACGATGGGCTGCTGCGGTTTGT 1359
Query 1032 GCTCAGAC-CACACAGACCCGAAACCCAACCGAATGGCTAACCGAATGGGCTGCAGAGCC 1090
|||||||| || ||||||||||||||||||| ||||||| |||||||||||| |||| ||
Sbjct 1360 GCTCAGACTCA-ACAGACCCGAAACCCAACCCAATGGCTGACCGAATGGGCTCCAGAACC 1418
Query 1091 GCGTGATGTGTATTGGCCAAACCTTGCGATTCCATATGTTTCTTTGACTGTAAGAAATTT 1150
||||||||||| |||| |||| ||||| ||||||||||||||| |||| ||||| | ||
Sbjct 1419 GCGTGATGTGTTTTGGTCAAATCTTGCTATTCCATATGTTTCTCTGACAGTAAGGAGGTT 1478
Query 1151 GGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCCCTATCGCGTTTGT 1210
| | ||| |||| |||||||||||||| |||||||| ||||| |||| |||||||||||
Sbjct 1479 GATCATGCATGTTGCCTTCTTCTTCCTAACCTTCTTCTTCATTGTCCCCATCGCGTTTGT 1538
Query 1211 ACAATCTCTTGCTACCGTTG-AGGGAATTGAGAAAGTTGCGCCGTTCTTGAAAG-TCATT 1268
||||||||||||||| ||| |||| |||| ||||| ||| ||||||||| ||| | |||
Sbjct 1539 TCAATCTCTTGCTACCATTGAAGGG-ATTGTGAAAGCTGCTCCGTTCTTG-AAGTTTATT 1596
Query 1269 ATCGAAGATAAATTTGTAAAATCGCTGATACAAGGTCTGCTAGCC-GGTATTGTGCTGAA 1327
| || |||||||| | |||||| ||||||||||| | || || ||||||| |||||
Sbjct 1597 GTAGATGATAAATTCATGAAATCGGTGATACAAGGTTTCCT-TCCGGGTATTGCACTGAA 1655
Query 1328 GCTTTTCCTCATCTTTCTGCCAGGCATACTGATGACCATGTCCAAATTTGAAGGCTTTAC 1387
|||||||||| |||||||||| ||| |||||| ||||||||||||||||||||| ||
Sbjct 1656 GCTTTTCCTCGCCTTTCTGCCATCCATTTTGATGATCATGTCCAAATTTGAAGGCTTCAC 1715
Query 1388 TTCAG-TTTCATCCTTAGAAAGACGATCCGCGTCTAGATATTACATCTTTAACTTAGTGA 1446
|| | | ||||| ||||| |||||| | |||| | ||||||||||||| ||||||||||
Sbjct 1716 ATC-GATCTCATCTTTAGAGAGACGAGCAGCGTTTCGATATTACATCTTCAACTTAGTGA 1774
Query 1447 ACGTCTTTCTTGGAAATGTTATCGCTGGAGCTGCGTTTGAGCAGCTTAACTCTTTCCTCA 1506
|||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1775 ACGTCTTTCTTGCTAGCGTTATCGCTGGAGCTGCGTTTGAACAGCTTAACTCTTTCCTCA 1834
Query 1507 ATCAGT-CGCCTAATCAAATCCCTAAGACAATTGGCATGGCGATACCGATGAAAGCAACC 1565
|||| | || | || |||||||| || || ||||| ||||||||||||||||||||||
Sbjct 1835 ATCAATCCG-CAAACCAAATCCCCAAAACCATTGGTGTGGCGATACCGATGAAAGCAACT 1893
Query 1566 TTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATTCTTATG 1625
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1894 TTCTTCATCACGTATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATTCTAATG 1953
Query 1626 TTAAAACC-TCTCATTATATACCACCTCAAAAACGCACT-CTTGGTGAAAACAGAGAAAG 1683
| ||||| | | ||||| | ||| ||||||||||| || |||||| || || || ||||
Sbjct 1954 CTGAAACCAT-TGATTATGTTCCATCTCAAAAACGC-CTTCTTGGTTAAGACTGATAAAG 2011
Query 1684 ACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAGAGCCTCAGATAC 1743
||||||||||||||||| ||||||||||||| ||||| ||||| || ||||||| |||||
Sbjct 2012 ACAGAGAGGAAGCAATGGACCCGGGAAGCATTGGTTTTAACACGGGTGAGCCTCGGATAC 2071
Query 1744 AGCTTTACTTCCTTCTCGGTCTTGTCTATGCTCCCGTGACACCAATGCTTCTTCCTTTTA 1803
|||| ||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 2072 AGCTCTACTTTCTTCTCGGTCTTGTCTACGCTCCTGTGACACCGATGCTTCTTCCTTTTA 2131
Query 1804 TCTTAATCTTCTTTGCGCTTGCTTACGTCGTATATCGCCATCAGATCATAAATGTGTATA 1863
|||| ||||||| || ||||||||| | ||||||||||| || ||||| || || || |
Sbjct 2132 TCTTGGTCTTCTTCGCCCTTGCTTACATTGTATATCGCCACCAAATCATTAACGTATACA 2191
Query 1864 ATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCAGATGTTCATGGACGGGTTATAACGG 1923
||||||| || ||||| ||||| |||||||||||||| ||||||||||| || ||| | |
Sbjct 2192 ATCAAGAATACGAGAGTGCTGCAGCGTTTTGGCCAGACGTTCATGGACGAGTCATAGCAG 2251
Query 1924 CATTGATCATATCTCAGTTGCTTCTGATGGGTTTGATAGGTA-CAAAACATGCCGCTTTA 1982
||||| | ||||| |||||||||||||||||| | || || | |||| || || || |||
Sbjct 2252 CATTGGTAATATCACAGTTGCTTCTGATGGGTCT-ATTGGGAACAAAGCACGCTGCATTA 2310
Query 1983 GCTGCACCGTTTCTCATCGCTCTTCCC-GTGATTACCATCAGTTTCCACCGCTTCTGTAA 2041
||||||||||||||||| ||| || || ||| ||||||| ||||||||| |||||| ||
Sbjct 2311 GCTGCACCGTTTCTCATTGCT-TTGCCTGTGCTTACCATTGGTTTCCACCACTTCTGCAA 2369
Query 2042 AGGCCGTTATGAACCCGCCTTT-ATCCGATACCCCTTACAGGAAGCTATGATGAAAGATA 2100
||| |||||||| || || ||| ||| ||||||| |||||||||||||||||||||||||
Sbjct 2370 AGGTCGTTATGAGCCAGC-TTTCATCAGATACCCTTTACAGGAAGCTATGATGAAAGATA 2428
Query 2101 CATTGGAAAGAGCAAGAGAGCCTAATCTGAACCTGAAAGGTTACTTGCAAGACGCTTATA 2160
|||| |||| |||||||| || || |||||||| ||||| ||||||||| | |||||
Sbjct 2429 CATTAGAAACCGCAAGAGAACCAAACCTGAACCTTAAAGGCTACTTGCAAAATGCTTACG 2488
Query 2161 TTCATCCTGTTTTCAAAGGCGGTGATGACGAC---GACG--G-TGACATGATTGGAAAAT 2214
||||||| ||||||||||||| ||| ||||| ||| | ||||| | | || || |
Sbjct 2489 TTCATCCGGTTTTCAAAGGCGATGAAGACGATTATGACATTGATGACAAGCTCGGGAAGT 2548
Query 2215 TGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGGAACACTCCCGCGC 2274
| ||| |||||| ||| || || || || ||||| || ||| |||| || ||||| || |
Sbjct 2549 TTGAGGATGAAGCCATTATTGTTCCCACCAAACGTCAGTCGAGGAGAAATACTCCGGCTC 2608
Query 2275 CAAGCCGAATCAG 2287
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Sbjct 2609 CTAGCATAATCAG 2621
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117117871485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5