BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943213 Length=289 Score E Sequences producing significant alignments: (Bits) Value AT4G04360.1 | Symbols: | Protein of unknown function (DUF1068)... 322 1e-87 > AT4G04360.1 | Symbols: | Protein of unknown function (DUF1068) | chr4:2133139-2133935 REVERSE LENGTH=603 Length=603 Score = 322 bits (174), Expect = 1e-87 Identities = 197/208 (95%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 1 AGAAAGTAATAAAGAGAGAGATGACCAGAAGGCAGAAGAAGACGGCGAAGGTGGTAACAG 60 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 AGAAAG-AA-ATAGAGAGAGATGACCAGAAGGCAGAAGAAGACGGCGAAGGTGGTAACAG 109 Query 61 TGGTAATGGGATTGTGTATTGTCGCCTACATTGCAGGACCGTCTCTGTATTGGCATCTCA 120 ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 110 TGGTAATGGGACTGTGTATTGTCGCATATATTGCAGGACCGTCTCTGTATTGGCATCTCA 169 Query 121 ACGAGACCATTGCAGATTCTCTCCACTCCTCTTGCCCACCTTGTGTATGTGACTGTTCTT 180 | |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct 170 ATGAGACCATTGCAGATTCTCTCCACTCCTCTTGTCCTCCTTGTGTATGTGATTGTTCTT 229 Query 181 CTCAGCCTCTCCTCTCCATCCCCGACGG 208 ||||||||||||||||||| |||||||| Sbjct 230 CTCAGCCTCTCCTCTCCATTCCCGACGG 257 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13320953485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5