BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943230
Length=1438
Score E
Sequences producing significant alignments: (Bits) Value
AT4G04610.1 | Symbols: APR1, APR, PRH19, ATAPR1 | APS reductase... 2202 0.0
AT4G21990.1 | Symbols: APR3, PRH-26, PRH26, ATAPR3 | APS reduct... 1142 0.0
> AT4G04610.1 | Symbols: APR1, APR, PRH19, ATAPR1 | APS reductase
1 | chr4:2325003-2327013 FORWARD LENGTH=1759
Length=1759
Score = 2202 bits (1192), Expect = 0.0
Identities = 1366/1448 (94%), Gaps = 20/1448 (1%)
Strand=Plus/Plus
Query 1 ATCGAATTTTTGCTGTGAAAATGGCAATGTCTGTGAATGTttcttcttcttcttcttctG 60
||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 47 ATCCAATTTTTGCTGTGAAGATGGCAATGTCTGTAAATGTTTCTTCTTCTTCGTCTTCTG 106
Query 61 GGATCATAAACTCTGGTTTCTCTCGTTCCGGTGCTTCATCGGAGCCAAAAGTTTCGCAAA 120
|||||||||| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 107 GGATCATAAA---------CTCTCGTTTCGGTGTTTCATTGGAGCCAAAAGTTTCGCAAA 157
Query 121 TCGGTTCGTTGCGGTTATTGGATCGTGTTCATGTTGCTCCGGTGTCTCTGAATCTATCTG 180
| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 158 TTGGTTCGTTGAGGTTATTGGATCGTGTTCATGTTGCTCCTGTGTCTCTGAATCTATCTG 217
Query 181 GGAAGCGATCATCATCTGTTAAACCTTTAAACGCTGAACCAAAGACAAAGGATTCAATGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218 GGAAGCGATCATCATCTGTTAAACCTTTAAACGCTGAACCAAAGACAAAGGATTCAATGA 277
Query 241 TTCCTCTTGCTGCAACAATGGTAGCAGAAATTGCAGAGGAAGTTGAA---G-T-AG-TTG 294
|||||||||| |||||||||||||||||||||||||||||||||||| | | || |||
Sbjct 278 TTCCTCTTGCGGCAACAATGGTAGCAGAAATTGCAGAGGAAGTTGAAGTGGTTGAGATTG 337
Query 295 A-GA--TTGAAGAGCTTGCAAAGAAGCTT-GAGAATGCTTCACCTCTTGAGATTATGGAT 350
| || ||||||||||||| |||||| || |||||||||||||||||||||||||||||
Sbjct 338 AGGATTTTGAAGAGCTTGCTAAGAAG-TTAGAGAATGCTTCACCTCTTGAGATTATGGAC 396
Query 351 AAAGCTCTTGAGAAATACGGGAATGATATTGCTATTGCATTTAGTGGTGCAGAAGATGTT 410
||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct 397 AAAGCTCTTGAGAAATACGGGAACGATATCGCCATTGCATTTAGTGGTGCAGAAGATGTT 456
Query 411 GCTCTAATTGAGTATGCTCATTTGACTGGGAGACCATTTAGAGTATTTAGTTTGGATACA 470
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 457 GCTCTTATTGAGTACGCTCATTTGACTGGGAGGCCATTTAGAGTATTTAGTTTGGATACA 516
Query 471 GGGAGGTTGAATCCCGAGACGTATCGGTTTTTTGATGCGGTGGAGAAACACTATGGGATT 530
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 517 GGGAGGTTGAATCCTGAGACGTATCGGTTTTTCGATGCGGTGGAGAAGCACTATGGGATT 576
Query 531 AGAATTGAGTATATGTTTCCTGATTCTGTTGAGGTTCAAGGTTTAGTTAGGAGCAAGGGA 590
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 577 AGGATTGAGTATATGTTTCCTGATTCTGTTGAGGTTCAAGGTTTGGTTAGGAGCAAGGGA 636
Query 591 TTGTTCTCTTTCTATGAGGATGGTCATCAGGAGTGTTGCCGTGTTCGAAAGGTGAGACCT 650
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 TTGTTCTCTTTTTATGAGGATGGTCATCAGGAGTGTTGCCGTGTTCGAAAGGTGAGACCT 696
Query 651 TTGAGGCGTGCTCTTAAGGGCTTAAAGGCTTGGATTACTGGTCAGAGGAAAGATCAGTCT 710
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 697 TTGAGGCGTGCTCTCAAGGGTTTAAAGGCTTGGATTACTGGTCAGAGGAAAGATCAATCT 756
Query 711 CCAGGAACGAGGTCTGAGATTCCGGTGGTTCAGGTTGATCCTGTGTTTGAAGGTTTGGAT 770
|| || || ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 757 CCGGGGACAAGGTCTGAGATTCCGGTTGTTCAGGTTGATCCGGTGTTTGAAGGTTTGGAT 816
Query 771 GGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCGAATGTGGAAGGGAATGATGTT 830
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 817 GGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCGAATGTTGAAGGGAATGATGTT 876
Query 831 TGGAACTTCTTGAGGACTATGGATGTTCCGGTTAACACATTGCACGCGGCAGGGTATATA 890
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 877 TGGAACTTCTTGAGGACTATGGATGTTCCGGTTAACACATTGCATGCGGCAGGGTATATA 936
Query 891 TCGATTGGATGTGAGCCTTGCACGAAAGCGGTTTTACCGGGCCAGCACGAGAGGGAAGGG 950
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 937 TCGATTGGATGTGAGCCTTGCACGAAAGCGGTTTTACCGGGTCAGCACGAGAGAGAAGGG 996
Query 951 AGATGGTGGTGGGAAGATGCTAAAGCCAAGGAATGTGGGCTTCACAAAGGGAATGTCAAG 1010
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 997 AGATGGTGGTGGGAAGATGCTAAAGCCAAGGAATGTGGACTTCACAAAGGGAATGTCAAA 1056
Query 1011 GAAAACACCGCTGATGCTAACGTAAACGGGGAATCCAAAAACGCTGTTGCAGATATCTTT 1070
|||||| ||| ||||||||| || ||||||||||| ||| |||||||||||||||||||
Sbjct 1057 GAAAACTCCGATGATGCTAAAGTGAACGGGGAATCGAAATCCGCTGTTGCAGATATCTTT 1116
Query 1071 AAGAGTGAGAATCTTGTAACTTTGAGCAGGCAAGGGATTGAGAATTTGATGAAGTTGGAG 1130
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1117 AAGAGTGAGAATCTTGTGACTTTGAGCAGGCAGGGGATTGAGAATTTGATGAAGTTGGAG 1176
Query 1131 AACCGTAAAGAGCCTTGGATCGTCGTGCTTTATGCTCCGTGGTGCCCCTTTTGTCAAGCC 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 AACCGTAAAGAGCCTTGGATCGTCGTGCTTTATGCTCCGTGGTGCCCCTTTTGTCAAGCC 1236
Query 1191 ATGGAAGCATCGTATGATGAACTGGCGGATAAATTGGCTGGAAGTGGGATTAAGGTTGCA 1250
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 ATGGAAGCATCGTATGATGAACTGGCGGATAAATTGGCTGGAAGTGGGATTAAGGTTGCC 1296
Query 1251 AAATTCAGAGCTGATGGTGACCAGAAGGATTTTGCTAAGCAAGAATTGCAGCTCGGTAGC 1310
||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1297 AAATTCAGAGCAGATGGTGACCAGAAGGAGTTTGCTAAGCAGGAATTGCAGCTCGGTAGC 1356
Query 1311 TTCCCGACCATACTTGTCTTCCCCAAGAACTCTTCAAGACCGATCAAGTATCCGTCTGAG 1370
||||| ||||| || || ||||| |||||||| || ||||||||||||||||||||||||
Sbjct 1357 TTCCCTACCATTCTGGTTTTCCCTAAGAACTCATCGAGACCGATCAAGTATCCGTCTGAG 1416
Query 1371 AAGAGAGATGTCGATTCTTTGACTTCGTTCTTGAATCTTGTCCGATAAATAAACCACAAA 1430
||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1417 AAGAGAGATGTTGAGTCTTTGACTTCGTTCTTGAATCTTGTCCGATAAGTAAACCACAAA 1476
Query 1431 ACCAGTCG 1438
||||||||
Sbjct 1477 ACCAGTCG 1484
> AT4G21990.1 | Symbols: APR3, PRH-26, PRH26, ATAPR3 | APS reductase
3 | chr4:11657008-11659105 REVERSE LENGTH=1785
Length=1785
Score = 1142 bits (618), Expect = 0.0
Identities = 979/1151 (85%), Gaps = 34/1151 (3%)
Strand=Plus/Plus
Query 290 AGTTG-AGA--TTGAAGAGCTTGCAAAGAAGCTT-GAGAATGCTTCACCTCTTGAGATTA 345
||||| ||| |||| || || |||||| || || ||||||||||| ||||||||||| |
Sbjct 375 AGTTGAAGACTTTGAGGAACTAGCAAAG-AGATTAGAGAATGCTTCTCCTCTTGAGATCA 433
Query 346 TGGATAAAGCTCTTGAGAAATACGGGAATGATATTGCTATTGCATTTAGTGGTGCAGAAG 405
||||||||||||||||||| | |||||||| ||||||||||| |||||||| || ||||
Sbjct 434 TGGATAAAGCTCTTGAGAAGTTTGGGAATGACATTGCTATTGCCTTTAGTGGAGCTGAAG 493
Query 406 ATGTTGCTCTAATTGAGTATGCTCATTTGACTGGGAGACCATT-TAGAGTATTTAGTTTG 464
|||||||||| ||||||||||||||||| ||||| ||||| || ||| ||||| ||||||
Sbjct 494 ATGTTGCTCTGATTGAGTATGCTCATTTAACTGGAAGACC-TTATAGGGTATTCAGTTTG 552
Query 465 GATACAGGGAGGTTGAATCCCGAGACGTATCGGTTTTTTGATGCGGTGGAGAAACACTAT 524
||||||||||| |||||||| || || ||| | | || ||| | ||||||||||| ||
Sbjct 553 GATACAGGGAGATTGAATCCAGAAACATATAGACTCTTCGATACCGTGGAGAAACATTAC 612
Query 525 GGGATTAGAATTGAGTATATGTTTCCTGATTCTGTTGAGGTTCAAGGTTTAGTTAGGAGC 584
|| ||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct 613 GGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGGTTCAAGCTTTAGTTAGGAAC 672
Query 585 AAGGGATTGTTCTCTTTCTATGAGGATGGTCATCAGGAGTGTTGCCGTGTTCGAAAGGTG 644
||||| ||||||||||||||||| |||||||| ||||||||||||||| || ||||||||
Sbjct 673 AAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGTGTTGCCGTATTAGAAAGGTG 732
Query 645 AGACCTTTGAGGCGTGCTCTT-AAGGGCTTAAAG-GCTTGGATTACTGGTCAGAGGAAAG 702
||||||||||||||||| || ||||| || | | |||||||| ||||||||||||||||
Sbjct 733 AGACCTTTGAGGCGTGC-GTTGAAGGG-TTTACGTGCTTGGATCACTGGTCAGAGGAAAG 790
Query 703 ATCAGTCTCCAGGAACGAGGTCTGAGATTCCGGTGGTTCAGGTTGATCCTGTGTTTGAAG 762
|||| || || || || || || |||||||| || |||||||||||||| ||||||||||
Sbjct 791 ATCAATCACCCGGGACAAGATCGGAGATTCCTGTTGTTCAGGTTGATCCAGTGTTTGAAG 850
Query 763 GTTTGGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCGAATGTGGAAGGGA 822
| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 851 GATTAGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCTAATGTTGAAGGGA 910
Query 823 ATGATGTTTGGAACTTCTTGAGGACTATGGATGTTCCGGTTAACACA-TTGCACGCGGCA 881
||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct 911 ATGATGTTTGGAATTTCTTGAGGACGATGGATGTTCCTGTCAACACGCTT-CACGCTGC- 968
Query 882 GGGT-ATATATCGATTGGATGTGAGCCTTGCACGAAAGCGGTTTTACCGGGCCAGCACGA 940
|||| || | || || ||||||||||| ||||||| ||||||||| ||||| ||||| ||
Sbjct 969 GGGTTATGTTTCAATCGGATGTGAGCCATGCACGAGAGCGGTTTTGCCGGGTCAGCATGA 1028
Query 941 GAGGGAAGGGAGATGGTGGTGGGAAGATGCTAAAGCCAAGGAATGTGGGCTTCACAAAGG 1000
||| ||||||||||||||||||||||||||||| || || || ||||| |||||||||||
Sbjct 1029 GAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGTGTGGCCTTCACAAAGG 1088
Query 1001 GAATGTCAAGGAAAACACCGCTGATGCTAACGTAAACGGGGAATC-CAAAA--AC-GC-T 1055
|||| ||||||| || ||| || | |||| || || ||| ||| || || |
Sbjct 1089 GAATATCAAGGAGAATACCAATG--GA-AACGCAACCGCT-AATGTCAACGGGACAGCCT 1144
Query 1056 --GTTGCAGATATCTTTAAGAGTGAGAATCTTGT-AACTTTGAGCAGGCAAGGGATTGAG 1112
|| || |||||||| || || |||||| |||| ||||| |||||||||||||||||||
Sbjct 1145 CAGTCGCGGATATCTTCAATAGCGAGAATGTTGTGAACTT-GAGCAGGCAAGGGATTGAG 1203
Query 1113 AATTTGATGAAGTTGGAGAACCGTAAAGAGCCTTGGATCGTCGTGCTTTATGCTCCGTGG 1172
|||||||||||||| |||||||| |||||| |||||||||| ||||||||||| ||||||
Sbjct 1204 AATTTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGCTTTATGCACCGTGG 1263
Query 1173 TGCCCCTTTTGTCAAGCCATGGAAGCATCGTAT-GATGAACTGGCGGATAAATTGGCTGG 1231
||||| |||||||| || |||||||| || | | |||||| |||||||||| ||| ||
Sbjct 1264 TGCCCGTTTTGTCAGGCAATGGAAGCTTCAT-TCGATGAATTGGCGGATAAGCTGGGAGG 1322
Query 1232 AAGTGG-GATTAAGGTTGCAAAATTCAGAGCTGATGGTGACCAGAAGGATTTTGCTAAGC 1290
|||||| | | |||||||| || || ||||||||||||||||||||||| ||||| ||
Sbjct 1323 AAGTGGTG-TGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGAAGGACTTTGCCAAA- 1380
Query 1291 AAGAA-TTGCAGCTCGGTAGCTTCCCGACCATACTTGTCTTCCCCAAGAACTCTTCAAGA 1349
||| | |||||||| || ||||| || || |||||||| ||||| |||||||||||||||
Sbjct 1381 AAGGAGTTGCAGCTTGGAAGCTTTCCAACAATACTTGTGTTCCCAAAGAACTCTTCAAGA 1440
Query 1350 CCGATCAAGTATCCGTCTGAGAAGAGAGATGTCGATTCTTTGACTTCGTTCTTGAATCTT 1409
|| ||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||
Sbjct 1441 CCAATCAAGTATCCATCAGAGAAGAGAGATGTTGATTCTTTGACATCTTTCTTGAATCTT 1500
Query 1410 GTCCGATAAAT 1420
|| || |||||
Sbjct 1501 GTTCGGTAAAT 1511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70883169540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5