BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943302 Length=1063 Score E Sequences producing significant alignments: (Bits) Value AT4G05200.1 | Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like... 1315 0.0 > AT4G05200.1 | Symbols: CRK25 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 | chr4:2679723-2682309 REVERSE LENGTH=2098 Length=2098 Score = 1315 bits (712), Expect = 0.0 Identities = 891/976 (91%), Gaps = 18/976 (2%) Strand=Plus/Plus Query 21 ATGTCTTCTTGTTTCAAATCCTCTGTTTCTCTGATCTCAATTTTCTTCTTTATGATCTTA 80 ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 1 ATGTCTTCTTGTTTCAAATCCTCTGTTTCTCTGTTCTCAGTTTTCTTGTTTATGATCTT- 59 Query 81 AAAG-CTGTTTCTTCTGCAACAAATCCAATTTATCTCTACCACATATGTCCAAACACGAC 139 ||| | ||| | | | || |||||| ||||||||||||||||||||||||||| || Sbjct 60 GAAGACAGTTAC-T-T----CAGATCCAACTTATCTCTACCACATATGTCCAAACACAAC 113 Query 140 AACGTACTCAAGAAACAGCACTTACTTAACCAATCTCCGAACTGTTCTTTCATCTCTCTC 199 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 114 AACGTACTCAAGAAACAGCAGTTACTTAACCAATCTCCGAACTGTTCTTTCATCTCTCTC 173 Query 200 CTCTCCAAACGCAGCTTACGCATCGCGTTTCGATAACGCAACCGCTGGTGAAGAGAATGA 259 |||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| || Sbjct 174 CTCTCCAAACGCAGCTTATGCATCGCTTTTTGATAACGCAGCCGCTGGTGAAGAGAACGA 233 Query 260 TAACAACAGAGTTTATGGTGTTTTCCTCTGCCGTGGAGACGTCTCAGCCGAAATCTGCCG 319 || ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 234 TAGCAACAGAGTCTATGGTGTTTTTCTCTGCCGTGGAGATGTCTCAGCCGAAATCTGCCG 293 Query 320 TGATTGTCTTGCGTTTGCGGTCAACGAAACGCTTTACAGGTGTCCAAGAGAGAAAGTGGC 379 ||| ||| | |||||||| | |||||||||||| | ||||||||||||||||||||||| Sbjct 294 TGACTGTGTCGCGTTTGCAGCCAACGAAACGCTCCAAAGGTGTCCAAGAGAGAAAGTGGC 353 Query 380 AGTGATTTGGTACGATGAGTGTATGTTAAGATACTCTAATCAAAGCATCGTTGGGCAAAT 439 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 354 AGTGATTTGGTACGATGAGTGTATGGTAAGATACTCTAATCAAAGCATCGTAGGGCAAAT 413 Query 440 GAGAATTAGACCTGCTGTTTTCTTGACGAACAAGCAAAACATCACAGAGAATCAAGTGAG 499 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 GAGAATTAGACCTGGTGTTTTCTTGACGAACAAGCAAAACATCACAGAGAATCAAGTGAG 473 Query 500 CAGATTCAACGAGTCTTTGCCTGCTCTGCTCATCGACGTTGCGGTGAAAGCGGCTTCGAG 559 ||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||| Sbjct 474 CAGATTCAACGAGTCTTTGCCTGCTCTGCTCATAGATGTTGCGGTGAAAGCCGCTTTGAG 533 Query 560 CTCGAGAAAGTTCGCTACAGAGAAAGCGAATTTCACGGTGTTTCAAACGATTTATAGCCT 619 |||||||||||||||||| |||||||| ||||||||||| ||||| || || |||||||| Sbjct 534 CTCGAGAAAGTTCGCTACGGAGAAAGCCAATTTCACGGTTTTTCAGACAATCTATAGCCT 593 Query 620 CGTGCAGTGCACGCCGGATTTGACCAATCAAGATTGTGAGAGCTGTTTGAGACAAG-CGA 678 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | | Sbjct 594 TGTGCAGTGCACTCCGGATTTGACTAATCAAGATTGTGAGAGCTGTTTGAGACAAGTC-A 652 Query 679 TTAATTGGTTGCCTAGATGTTGTGATCGAAGTGTTGGCGGGAGAGTAATCGCTCCGAGTT 738 |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 653 TTAATTACTTGCCGAGATGTTGTGATCGAAGCGTTGGCGGGAGAGTAATCGCTCCGAGTT 712 Query 739 GTAGCTTTAGATATGAGCTTTATCCGTTTTACAATGAAACTATAGCTGAGGCTACGATGG 798 ||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||||| Sbjct 713 GTAGCTTCAGATATGAGCTTTATCCATTTTACAATGAAACTATAGCTGCGGCTCCGATGG 772 Query 799 CTCCTCCTC-T--GTCTACGGTGGCTGCACCACCACTGAA-ACTCCCTTCAGAAGAAGGG 854 ||||||||| | ||| |||||| |||||||||||||||| | ||| ||||||| |||| Sbjct 773 CTCCTCCTCCTTCGTCAACGGTGACTGCACCACCACTGAATATTCC-TTCAGAAAAAGGT 831 Query 855 AAAAGCAAGAGCTCGACGGTTAAAGTAACAGCGGTCGCGGTACCGGTTTCTGTCTGCGTG 914 ||| |||||| || ||| |||| ||| || ||| |||| ||||||||||||||||| ||| Sbjct 832 AAAGGCAAGAACTTGACAGTTATAGTTACCGCGATCGCTGTACCGGTTTCTGTCTGTGTG 891 Query 915 TTACTTCTTGGTGCTATGTGTTGGTTACTAGCAAAAAGAAGGAATAA-A--CTCAGTGCT 971 |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct 892 TTACTTCTTGGTGCTATGTGTTGGTTACTAGCAAGAAGAAGGAATAATAAGCTCAGTGCT 951 Query 972 GAAACAGAGGATTTAG 987 |||||||||||||||| Sbjct 952 GAAACAGAGGATTTAG 967 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52057965165 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5