BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943448 Length=1025 Score E Sequences producing significant alignments: (Bits) Value AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfami... 1533 0.0 > AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:1207725-1209287 FORWARD LENGTH=1257 Length=1257 Score = 1533 bits (830), Expect = 0.0 Identities = 911/951 (96%), Gaps = 2/951 (0%) Strand=Plus/Plus Query 55 CCGGTAACGCGGGAACAAGCGGAAACATTCCGATGTATAAGCCATACCGTCACCTGAAAA 114 |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 87 CCGGTAACGCAGGAACAAGCGGAAACGTTCCGATATATAAGCCATACCGTCACCTGAAAA 146 Query 115 CCCTAGAAGGTCACACGGCGGCGATCTCTTGCGTCAAATTCTCCAACGACGGCAATCTTC 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 CCCTAGAAGGTCACACGGCGGCGATCTCTTGCGTCAAATTCTCCAACGACGGCAATCTTC 206 Query 175 TGGCTTCCGCTTCCGTCGACAAAACCATGATTCTCTGGTCAGCTACGAACTACTCTCTTA 234 | |||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| | Sbjct 207 TCGCTTCCGCTTCCGTAGACAAAACCATGATCCTCTGGTCAGCAACAAACTACTCTCTCA 266 Query 235 TTCATCGTTACGAAGGTCACTCTATTGGTATCTCCGATCTAGCTTGGTCTTCTGATTCGC 294 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 267 TTCATCGTTACGAAGGTCACTCTAGTGGTATCTCCGATCTAGCTTGGTCTTCTGATTCGC 326 Query 295 ATTACACTTGCTCTGCTTCTGATGATTGTACGCTTCGAATCTGGGACGCTAGATCTCCTT 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 ATTACACTTGCTCTGCTTCTGATGATTGTACGCTTCGAATCTGGGACGCTAGATCTCCTT 386 Query 355 ACGAGTGTCTTAAGGTTCTTAGAGGTCATACGAATTTCGTGTTCTGTGTTAATTTCAATC 414 | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 387 ATGAATGTCTTAAGGTTCTTAGAGGTCATACGAATTTCGTCTTCTGTGTTAATTTCAATC 446 Query 415 CTCCGTCGAATTTGATTGTGTCTGGATCGTTTGATGAGACGATTCGGATTTGGGAGGTTA 474 |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 447 CTCCTTCGAATTTGATTGTGTCTGGATCGTTCGATGAGACGATTCGTATTTGGGAGGTTA 506 Query 475 AGACTGGGAAATGTGTTAGGATGATTAAAGCTCATTCGATGCCGATTTCGAGTGTGCATT 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 507 AGACTGGGAAGTGTGTTAGGATGATTAAAGCTCATTCGATGCCGATTTCGAGTGTGCATT 566 Query 535 TTAATCGAGATGGATCGTTGATTGTTTCGGGAAGTCATGATGGTTCTTGTAAAATTTGGG 594 ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct 567 TTAATAGAGATGGATCGTTGATTGTTTCGGCAAGTCATGATGGTTCTTGTAAGATTTGGG 626 Query 595 ATGCTAAGGAAGGAACTTGCTTGAAGACTCTTATTGATGATAAATCTCCGGCTGTTTCTT 654 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 ATGCTAAAGAAGGAACTTGCTTGAAGACTCTTATTGATGATAAATCTCCGGCTGTTTCTT 686 Query 655 TCGCCAAATTCTCGCCTAACGGGAAGTTTATACTCGTTGCTACGCTCGATAGTACTCTCA 714 |||| || |||||||| || || |||||||||||||||||||| |||||||||||||||| Sbjct 687 TCGCTAAGTTCTCGCCCAATGGCAAGTTTATACTCGTTGCTACTCTCGATAGTACTCTCA 746 Query 715 AGCTGTCCAACTATGCAACGGGGAAGTTTCTGAAAGTGTACACAGGACATACCAACAAAG 774 ||||||| |||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct 747 AGCTGTCGAACTATGCGACGGGGAAGTTTTTGAAAGTGTATACAGGACATACTAACAAAG 806 Query 775 TGTTCTGTATCACATCGGCGTTTTCTGTAACGAATGGGAAGTACATTGTGAGTGGATCAG 834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 807 TGTTCTGTATCACATCGGCGTTTTCTGTAACGAATGGGAAGTACATTGTGAGTGGATCAG 866 Query 835 AGGACAATTGTGTGTATCTGTGGGATCTTCAA-CAGAAAAATATACTGCAGAGATTGGAA 893 |||| ||||||||||||||||||||||||||| | || |||||||||||||||| | ||| Sbjct 867 AGGATAATTGTGTGTATCTGTGGGATCTTCAAGC-GAGAAATATACTGCAGAGACTAGAA 925 Query 894 GGCCACACAGACGCAGTGATCTCAGTGAGTTGCCATCCGGTTCAGAACGAGATAGCTTCA 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 926 GGCCACACAGACGCAGTGATCTCAGTGAGTTGCCATCCGGTTCAGAACGAGATATCTTCA 985 Query 954 TCGGGAAATCATTTGGATAAAACTATCAGGATTTGGAAACAGGATGCTTGA 1004 ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 TCGGGTAATCATTTGGATAAAACTATCAGGATTTGGAAACAGGATGCTTGA 1036 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50234147000 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5