BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943609
Length=1171
Score E
Sequences producing significant alignments: (Bits) Value
AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:56709... 1914 0.0
AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:20... 1192 0.0
> AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567095-569088
FORWARD LENGTH=1454
Length=1454
Score = 1914 bits (1036), Expect = 0.0
Identities = 1104/1137 (97%), Gaps = 3/1137 (0%)
Strand=Plus/Plus
Query 21 CGATGTCGGCGGAGACTTGTTTCGGAAGTTCAGGTGATC-AA--AGCAGCAAAGGATTGC 77
||||||||||||||| |||||||||||| || ||||||| || |||||||||||| ||
Sbjct 123 CGATGTCGGCGGAGAGTTGTTTCGGAAGCTCGGGTGATCAAAGCAGCAGCAAAGGAGTGG 182
Query 78 CTACTCATGGTGGTAGCTATGTTCAGTATAATGTCTATGGCAATCTCTTCGAAGTTTCTA 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 CTACTCATGGTGGTAGCTATGTTCAGTATAATGTCTATGGCAATCTCTTCGAAGTTTCTA 242
Query 138 GAAAGTATGTTCCTCCTCTTCGTCCCATCGGTAGAGGCGCTTATGGAATTGTCTGTGCTG 197
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 243 GAAAGTATGTTCCTCCTCTTCGTCCTATCGGTAGAGGCGCTTATGGAATTGTCTGTGCTG 302
Query 198 CTACAAACTCAGAGACTGGAGAGGAAGTAGCTATCAAGAAGATTGGTAATGCTTTTGACA 257
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 303 CTACAAACTCAGAGACTGGAGAGGAGGTAGCTATCAAGAAGATTGGTAATGCTTTTGACA 362
Query 258 ATATTATCGATGCTAAAAGAACTTTGAGAGAGATTAAGCTTCTCAAGCATATGGATCATG 317
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 363 ATATTATCGATGCTAAAAGGACTTTGAGAGAGATTAAGCTTCTCAAGCATATGGATCATG 422
Query 318 AAAATGTGATTGCTGTCAAGGATATAATAAAACCACCGCAGAGAGAGAACTTCAATGATG 377
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 AAAATGTGATTGCTGTAAAGGATATAATAAAACCACCGCAGAGAGAGAACTTCAATGATG 482
Query 378 TTTACATTGTTTATGAGCTTATGGACACTGATCTCCACCAAATTATACGCTCTAACCAAC 437
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 483 TTTACATTGTTTATGAGCTTATGGACACTGATCTCCACCAAATTATTCGCTCTAACCAAC 542
Query 438 CGTTAACTGATGATCATTGTCGGTTTTTTCTGTATCAGTTGTTGCGTGGCCTCAAATACG 497
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 543 CCTTAACTGATGATCATTGTCGGTTTTTTCTGTATCAGTTGTTGCGTGGGCTCAAATATG 602
Query 498 TTCATTCAGCTAATGTATTGCACCGAGATTTGAAACCCAGCAATTTGCTCCTGAATGCAA 557
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 603 TTCATTCAGCTAATGTATTGCATCGAGATTTGAAACCTAGCAATTTGCTCCTGAATGCAA 662
Query 558 ATTGTGATCTAAAGCTTGGGGATTTCGGGCTTGCGAGGACCAAATCTGAGACAGACTTCA 617
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 663 ATTGTGATCTAAAGCTTGGGGATTTCGGGCTTGCGAGGACCAAATCCGAGACTGACTTTA 722
Query 618 TGACTGAATATGTTGTTACACGTTGGTATCGAGCTCCAGAGCTGCTCCTTAATTGCTCAG 677
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 723 TGACTGAATATGTTGTTACACGTTGGTATCGAGCTCCAGAGCTGCTACTTAATTGCTCTG 782
Query 678 AATACACAGCAGCAATCGATATTTGGTCTGTCGGTTGTATACTCGGTGAAACAATGACAC 737
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 AATACACAGCAGCAATTGATATTTGGTCTGTCGGTTGTATACTCGGTGAAACAATGACAC 842
Query 738 GAGAGCCGTTGTTTCCCGGTAAAGATTATGTTCATCAGCTTAGACTCATCACTGAGCTAA 797
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 843 GAGAGCCCTTGTTTCCCGGTAAAGATTATGTTCATCAGCTTAGACTCATCACTGAGCTTA 902
Query 798 TAGGATCGCCTGATGACTCAAGCTTGGGATTCTTAAGAAGTGACAATGCAAGAAGATACG 857
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 TAGGATCTCCTGATGACTCAAGCTTGGGATTCTTAAGAAGTGACAATGCAAGAAGATACG 962
Query 858 TTAGACAGCTTCCGCAGTACCCGAGACAGAACTTTGCTGCTAGATTCCCAAACATGTCGG 917
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 963 TTAGACAGCTTCCACAGTACCCTAGACAGAACTTTGCTGCTAGATTCCCAAACATGTCGG 1022
Query 918 CTGGTGCAGTCGATTTACTGGAGAAAATGCTTGTTTTTGATCCAAGCAGACGCATCACAG 977
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 CTGGTGCAGTCGATTTGCTGGAGAAAATGCTTGTTTTTGATCCAAGCAGACGCATCACAG 1082
Query 978 TTGATGAGGCGTTGTGCCACCCATATTTGGCACCGCTGCATGATATAAACGAAGAACCGG 1037
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1083 TTGATGAGGCGTTGTGCCACCCATATTTGGCGCCGCTGCATGATATCAACGAAGAACCGG 1142
Query 1038 TATGTGTGAGGCCGTTCAATTTCGATTTCGAGCAACCTACTTTGACAGAAGAGAACATTA 1097
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1143 TATGTGTGAGGCCGTTCAATTTTGATTTCGAGCAACCTACTTTGACAGAAGAGAACATTA 1202
Query 1098 AGGAGCTTATATACCGTGAAACAGTCAAGTTCAATCCTCAAGACTCAGTGTGAGAGA 1154
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 AGGAGCTTATATACCGTGAAACAGTCAAGTTCAATCCTCAAGACTCAGTGTGAGAGA 1259
> AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:202136-204189
FORWARD LENGTH=1319
Length=1319
Score = 1192 bits (645), Expect = 0.0
Identities = 946/1093 (87%), Gaps = 13/1093 (1%)
Strand=Plus/Plus
Query 49 TTCAGGTGATCAAAGCAGCAAAGGATTGCCTACTC-ATGGTGGTAGCTATGTTCAGTATA 107
||| |||||| | |||| || |||| | || || |||||||| | ||||| |||||||
Sbjct 231 TTC-GGTGATGACAGCAACAGAGGAGTAAGTA-TCAATGGTGGTCGTTATGTGCAGTATA 288
Query 108 ATGTCTATGGCAATCTCTTCGAAGTTTCTAGAAAGTATGTTCCTCCTCTTCGTCCCATCG 167
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||| ||||
Sbjct 289 ATGTCTATGGAAATCTCTTTGAAGTTTCTAAAAAGTATGTTCCTCCTCTTCGTCCTATCG 348
Query 168 GTAGAGGCGCTTATGGAATTGTCTGTGCTGCTA-CAAACTCAGAGACTGGAGAGGAAGTA 226
| |||||||||| ||| || ||||||||||| | || || ||||| || |||||||||
Sbjct 349 GCAGAGGCGCTTCTGGCATCGTCTGTGCTGC-ATGGAATTCGGAGACGGGTGAGGAAGTA 407
Query 227 GCTATCAAGAAGATTGGTAATGCTTTTGACAATATTATCGATGCTAAAAGAACTTTGAGA 286
|| |||||||||||||||||||| |||| ||| |||||||| ||||| ||||||||||||
Sbjct 408 GCGATCAAGAAGATTGGTAATGCATTTGGCAACATTATCGACGCTAAGAGAACTTTGAGA 467
Query 287 GAGATTAAGCTTCTCAAGCATATGGATCATGAAAATGTGATTGCTGTCA-AGGATATAAT 345
|||||||||||||| ||||||||||||||||| ||||| ||||| | | | || |||||
Sbjct 468 GAGATTAAGCTTCTTAAGCATATGGATCATGACAATGTCATTGCCATTATA-GACATAAT 526
Query 346 AAAACCACCGCAGAGAGAGAACTTCAATGATGTTTACATTGTTTATGAGCTT-ATGGACA 404
|| |||||| ||| ||| ||||||||||||||| ||||||| |||||| || |||||||
Sbjct 527 AAGACCACCTCAGCCAGACAACTTCAATGATGTTCACATTGTCTATGAG-TTAATGGACA 585
Query 405 CTGATCTCCACCAAATTATACGCTCTAACCAACCGTTAACTGATGATCATTGTCGGTTTT 464
||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||| |
Sbjct 586 CTGATCTTCACCACATTATCCGCTCTAACCAACCGTTAACTGATGATCATTCACGGTTCT 645
Query 465 TTCTGTATCAGTTGTTGCGTGGCCTCAAATACGTTCATTCAGCTAATGTATTGCACCGAG 524
| ||||||||||||||||| |||||||| || || |||||||| |||||| |||| || |
Sbjct 646 TCCTGTATCAGTTGTTGCGAGGCCTCAAGTATGTGCATTCAGCCAATGTACTGCATCGTG 705
Query 525 ATTTGAAACCCAGCAATTTGCTCCTGAATGCAAATTGTGATCTAAAGCTTGGGGATTTCG 584
|||| ||||| || || ||||||||||||||||| ||||| || ||| |||||||||| |
Sbjct 706 ATTTAAAACCGAGTAACTTGCTCCTGAATGCAAACTGTGACCTCAAGATTGGGGATTTTG 765
Query 585 GGCTTGCGAGGACCAAATCTGAGACAGACTTCATGACTGAATATGTTGTTACACGTTGGT 644
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 766 GGCTTGCGAGGACTAAATCAGAGACAGACTTCATGACAGAATATGTTGTTACACGTTGGT 825
Query 645 ATCGAGCTCCAGAGCTGCTCCTTAATTGCTCAGAATACACAGCAGCAATCGATATTTGGT 704
| |||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 826 ACCGAGCTCCAGAGTTGCTCCTTAATTGCTCAGAATACACTGCAGCTATCGACATTTGGT 885
Query 705 CTGTCGGTTGTATACTCGGTGAAACAATGACACGAGAGCCGTTGTTTCCCGGTAAAGATT 764
|||||||||||||||||||||||| |||||| || |||||||| ||||| || | |||||
Sbjct 886 CTGTCGGTTGTATACTCGGTGAAATAATGACGCGGGAGCCGTTATTTCCGGGCAGAGATT 945
Query 765 ATGTTCATCAGCTTAGACTCATCACTGAGCTAATAGGATCGCCTGATGACTCAAGCTTGG 824
||||||| ||||||||||||||||||||||| ||||| || || ||||| |||||| | |
Sbjct 946 ATGTTCAGCAGCTTAGACTCATCACTGAGCTTATAGGCTCACCAGATGATTCAAGCCTAG 1005
Query 825 GATTCTTAAGAAGTGACAATGCAAGAAGATACGTTAGACAGCTTCCGCAGTACCCGAGAC 884
||||||||||||| ||||| || ||||||||||| ||||||||||| ||||| || ||||
Sbjct 1006 GATTCTTAAGAAGCGACAACGCTAGAAGATACGTAAGACAGCTTCCACAGTATCCAAGAC 1065
Query 885 AGAACTTTGCTGCTAGATTCCCAAACATGTCGG-CTGGTGCAGTCGATTTACTGGAGAAA 943
| |||||||| |||||||||||||||||||||| | ||| || ||||| ||| |||||
Sbjct 1066 AAAACTTTGCCGCTAGATTCCCAAACATGTCGGTCAA-TGCTGTTGATTTGCTGCAGAAA 1124
Query 944 ATGCTTGTTTTTGATCCAAGCAGACGCATCACAGTTGATGAGGCGTTGTGCCACCCATAT 1003
||||| || ||||| |||| ||||||||| ||||| ||||| || ||||||||||| ||
Sbjct 1125 ATGCTCGTCTTTGACCCAAACAGACGCATTACAGTCGATGAAGCCTTGTGCCACCCTTAC 1184
Query 1004 TTGGCACCGCTGCATGA-TATAAACGAAGAACCGGTATGTGTGAGGCCGTTCAATTTCGA 1062
|| |||||||| || || ||||| ||| ||||| || |||||||| |||||| |||| ||
Sbjct 1185 TTAGCACCGCTACACGAATATAA-CGAGGAACCTGTGTGTGTGAGACCGTTCCATTTTGA 1243
Query 1063 TTTCGAGCAACCTACTTTGACAGAAGAGAACATTAAGGAGCTTATATACCGTGAAACAGT 1122
||||||||||||| | ||||| ||||||||||| |||||||||||||| |||||| ||||
Sbjct 1244 TTTCGAGCAACCTTCATTGACGGAAGAGAACATCAAGGAGCTTATATATCGTGAATCAGT 1303
Query 1123 CAAGTTCAATCCT 1135
|||||| || |||
Sbjct 1304 CAAGTTTAACCCT 1316
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57479624025
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5