BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943852
Length=1643
Score E
Sequences producing significant alignments: (Bits) Value
AT4G38880.1 | Symbols: ATASE3, ASE3 | GLN phosphoribosyl pyroph... 2484 0.0
AT4G34740.1 | Symbols: ATASE2, CIA1, ATPURF2, ASE2 | GLN phosph... 449 3e-125
> AT4G38880.1 | Symbols: ATASE3, ASE3 | GLN phosphoribosyl pyrophosphate
amidotransferase 3 | chr4:18134116-18135714 FORWARD
LENGTH=1599
Length=1599
Score = 2484 bits (1345), Expect = 0.0
Identities = 1524/1609 (95%), Gaps = 17/1609 (1%)
Strand=Plus/Plus
Query 22 ATGGCCTTCTCTGT---AGAAATCTCGTCTA-TCTCTCCTTACACTTTATCCGCAAACCT 77
|||||||||||||| |||||||||||||| |||| ||| ||| ||||||||||||||
Sbjct 1 ATGGCCTTCTCTGTAGAAGAAATCTCGTCTATTCTC-CCTAACAGTTTATCCGCAAACCC 59
Query 78 TAGGAACGTTTCTCGAAATACCATTTTCCCTTCCTTTTTCAAGCCCTCCCTTAAACCCTA 137
|||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 60 TAGGAATGTTTCTCAAAATACTATTTCCCCTTCCTTTTTCAAGCCCTCCCTTAAACCGTA 119
Query 138 CGTTTCCAAAACCCTAAGTATCTCTGTT-TCATGCAGACACCCACTTTCCCCTGTTTTCT 196
|| |||||||||||| | ||||| || ||||| |||| | ||||||||||||||||||
Sbjct 120 CGCTTCCAAAACCCT-A--ATCTC-ATTGTCATGTAGACGCTCACTTTCCCCTGTTTTCT 175
Query 197 CGGCGAGAACACATGTCACTGACGAAGACGAAGATGACAAGCCTCACGAAGAATGCGGAG 256
||||| ||||| |||||||| ||| |||||||||||||||| |||||||||||||||||
Sbjct 176 CGGCGGGAACATATGTCACTAACGTTGACGAAGATGACAAGCTTCACGAAGAATGCGGAG 235
Query 257 TTGTCGGAATCCATGGAGACCCTGAAGCTTCCCGGCTTTCTTACTTGGCTCTTCACGCAC 316
|||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct 236 TTGTCGGAATCCATGGAGACCCTGAAGCTTCCCGTCTCTCTTACTTGGCTCTACACGCAC 295
Query 317 TGCAACACCGTGGCCAAGAAGGAGCAGGAATTGTAGCCGCTAATCAAAACGGTCTCGAAT 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 TGCAACACCGTGGCCAAGAAGGAGCAGGAATTGTAGCCGCTAATCAAAACGGTCTCGAAT 355
Query 377 CAATCACAGGGGTCGGATTAGTCTCAGATGTGTTCACCGAGTCAAAACTAAAAAATCTTC 436
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 356 CAATCACAGGGGTCGGATTAGTCTCAGATGTGTTCACCGAGTCAAAACTAAACAATCTTC 415
Query 437 CTGGCGACATAGCGATAGGGCATGTCCGGTACTCAACTTCCGGAGCTTCAATGCTCAAGA 496
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 416 CTGGCGACATAGCGATAGGGCATGTCCGGTACTCAACTTCCGGAGCCTCTATGCTCAAGA 475
Query 497 ATGTTCAGCCTTTCATCGCTAGCTGCAAGCTAGGATCACTTGCAGTAG-TGCACAATGGT 555
|||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||
Sbjct 476 ATGTTCAGCCTTTCATCGCTAGCTGCAAGCTAGGATCACTCGCAGTAGCT-CACAATGGT 534
Query 556 AATTTCGTGAATTACAAGCAACTGAAGACAAAGCTGGAAGAGAAGGGCTCAATCTTCATC 615
||||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||
Sbjct 535 AATTTCGTGAATTACAAGCAACTGAAGACAAAGCTCGAGGAGATGGGTTCAATCTTCATC 594
Query 616 ACAAGTTCTGATACCGAGCTCGTTCTTCACCTGATCGCCAAATCTAAGGCTAAGACGTTT 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 ACAAGTTCTGATACCGAGCTCGTTCTTCACCTGATCGCCAAATCTAAGGCTAAGACGTTT 654
Query 676 CTTTTGAGGGTCATTGATGCTTGTGAGAAGCTTAGAGGTGCTTACTCGATGGTTTTCGTC 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 CTTTTGAGGGTCATTGATGCTTGTGAGAAGCTTAGAGGTGCTTACTCGATGGTTTTCGTC 714
Query 736 TTTGAAGACAAGCTTATTGCTGTTCGTGACCCGTTTGGGTTTAGACCACTTGTGATGGGC 795
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 715 TTTGAAGACAAGCTTATTGCTGTTCGTGACCCTTTTGGGTTTAGACCACTTGTGATGGGC 774
Query 796 AGAAGAAGCAACGGAGCAGTTGTTTTTGCCTCCGAGACTTGCGCTCTGGACCTGATTGAT 855
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 775 AGAAGAAGCAACGGAGCAGTTGTTTTTGCCTCCGAGACTTGTGCTCTGGACCTGATTGAT 834
Query 856 GCTATTTATGAACGTGAAGTGTGTCCCGGAGAGATTGTGGTGGTGGATAGAAATCATGGA 915
|| | |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 835 GCGACTTATGAACGTGAAGTGTGTCCCGGTGAGATTGTGGTCGTGGATAGAAACCATGGA 894
Query 916 GACAGTTCAATGTTCATGATCTCTCACCCTGAACCA-AAACAGTGCGTTTTTGAGCATGG 974
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 895 GACAGTTCAATGTTCATGATCTCTCACCCTGAAC-AGAAACAGTGCGTTTTTGAGCATGG 953
Query 975 TTACTTCTCACAGCCCAACTCAATTGTCTTTGGCCGTTCTGTGTATGAAACACGCCGCAT 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 TTACTTCTCACAGCCCAACTCAATTGTCTTTGGCCGTTCTGTGTATGAAACACGCCGCAT 1013
Query 1035 GTACGGCGAGATCCTAGCCACCGTGGCACCTGTCGATTGTGATGTCGTCATCGCAGTGCC 1094
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1014 GTACGGCGAGATCCTAGCCACCGTGGCACCTGTCGATTGTGATGTTGTCATTGCAGTGCC 1073
Query 1095 AGACTCGGGGACAGTGGCAGCTCTTGGATATGCAGCCAAAGCTGGAGTGCCGTTCCAGAT 1154
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 AGACTCGGGGACAGTGGCTGCTCTTGGATATGCAGCCAAAGCTGGAGTGCCGTTCCAGAT 1133
Query 1155 TGGTCTTCTCAGGTCACACTATGCAAAACGCACGTTTATAGAGCCGACTCAGAAAATCCG 1214
||||||||| || ||||||||||| ||||| ||||||||||||||||||||| |||||||
Sbjct 1134 TGGTCTTCTGAGATCACACTATGCTAAACGTACGTTTATAGAGCCGACTCAGGAAATCCG 1193
Query 1215 TGATTTCGCGGTGAAGGTGAAGCTATCTCCTGTCCGAGCAGTCCTTGAAGGGAAGCGGGT 1274
|||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1194 TGATTTTGCAGTGAAGGTGAAGCTATCTCCTGTTCGAGCAGTCCTTGAAGGGAAGCGGGT 1253
Query 1275 GGTAGTAGTGGACGACTCTATTGTCCGCGGTACCACGAGTTTGAAGATAGTTCGGATGCT 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 GGTAGTAGTGGACGACTCTATTGTCCGCGGTACCACGAGTTTGAAGATAGTTCGGATGCT 1313
Query 1335 TAGAGACGCCGGAGCAAAGGAGGTTCATATGAGAGTCGCATTGCCACCGATGATTGCATC 1394
|||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1314 TAGAGATGCCGGAGCAAAGGAGGTTCATATGAGAATCGCATTGCCGCCGATGATTGCATC 1373
Query 1395 TTGTTACTACGGAGTGGACACCCCGAGGAGCCAAGAGTTGATCTCTAGTAAGATGAGCGT 1454
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 GTGTTACTATGGAGTGGACACCCCGAGGAGCCAAGAGTTGATCTCTAGTAAGATGAGCGT 1433
Query 1455 TGAGGCAATCCAGAAGCATATCAATTGTGATTCTCTGGCGTTTCTACCATTAGATTGCTT 1514
|||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct 1434 TGAGGCGATCCAGAAGCATATTAATTGTGATTCTTTGGCGTTTCTACCATTAGATAGCTT 1493
Query 1515 GGAAGAAGTCTATGGACCGGTAGAGTCACGCAGGTATTGCTATGCCTGCTTTACTGGTAA 1574
| ||| |||||||||||| || ||||||| ||||||||||||||||||||||||||| ||
Sbjct 1494 GAAAGGAGTCTATGGACCAGTCGAGTCACACAGGTATTGCTATGCCTGCTTTACTGGGAA 1553
Query 1575 GTACCCGGTGACCGCACCAGAGACTGAGGAGGAGGCCGACGCTTCATGA 1623
|||||| |||||| | ||||| ||||||||| ||||||||||||||
Sbjct 1554 GTACCCTGTGACCAAAACAGAGTCTGAGGAGG---CCGACGCTTCATGA 1599
> AT4G34740.1 | Symbols: ATASE2, CIA1, ATPURF2, ASE2 | GLN phosphoribosyl
pyrophosphate amidotransferase 2 | chr4:16574577-16576671
REVERSE LENGTH=2095
Length=2095
Score = 449 bits (243), Expect = 3e-125
Identities = 939/1268 (74%), Gaps = 76/1268 (6%)
Strand=Plus/Plus
Query 235 AAGCCTCACGAAGAATGCGGAGTTGTCGGAATCCATGGAGACCCTGAAGCTTCCCGGCTT 294
||||||| ||||| || ||||||||||||||| | || ||| | |||||||| || ||
Sbjct 336 AAGCCTCGGGAAGAGTGTGGAGTTGTCGGAATCTACGGTGACTCAGAAGCTTCACGACTC 395
Query 295 TCTTACTTGGCTCTTCACGCACTGCAACACCGTGGCCAAGAAGGAGCAGGAATTG-TAGC 353
| |||||| ||||| || || || || || || || |||||||| ||||| |||| || |
Sbjct 396 TGTTACTTAGCTCTCCATGCGCTTCAGCATCGAGGTCAAGAAGGTGCAGGTATTGTTA-C 454
Query 354 CGCTAATCAA-A-ACGG-TC-TCGA-ATCAATCACAGGGGTCGGATTAGTCTCAGATGTG 408
|| || | || | | || || || | | | || ||||| || || || ||||| || ||
Sbjct 455 CGTTAGTAAAGATAAGGTTCTTC-AGA-CCATTACAGGTGTTGGTTTGGTCTCTGAGGTT 512
Query 409 TTCACCGAGTCAAAACT-AAAAAATCTTCCTGGCGACATAGCGATAGGGCATGTCCGGTA 467
|||| || || ||||| | ||| | || || |||||||| || || |||||| ||||
Sbjct 513 TTCAGTGAATCCAAACTCGATCAAT-TACCAGGAGACATAGCCATTGGTCATGTCAGGTA 571
Query 468 CTCAACTTCCGGAGCTTCAATGCTCAAGAATGTTCAGCC-TTTCATCGCTAGCT-GCAAG 525
||| ||| | || |||| ||||||||||| |||||||| ||| | ||| | | | |
Sbjct 572 CTCGACTGCTGGTTCTTCTATGCTCAAGAACGTTCAGCCGTTT-GTTGCTGGTTATCGA- 629
Query 526 CTAGGATCACTTGCAGTAG-TGCACAATGGTAATTTCGTGAATTACAAGCAACTGAAGA- 583
| || || ||| || | | |||||||| ||||| |||||||||| | || || |||
Sbjct 630 TTTGGCTCTGTTGGTGTTGCT-CACAATGGCAATTTAGTGAATTACACGAAATTG-AGAG 687
Query 584 CAAAGCTGGAAGAGAAGGGCTCAATCTTC-ATCACAAGTTCTGATACCGAGCTCGTTCTT 642
| | | || || || || || || ||| || || || |||||||| ||| | || |||
Sbjct 688 CTGATTTAGAGGAAAATGGTTCGATTTTCAAT-ACTAGCTCTGATACTGAGGTTGTGCTT 746
Query 643 CACCTGATCGCCAAATCTAAGGCTAAGA-CGTTTCTT-TTGAGGGTCATTGATGCTTGTG 700
|| |||| |||| ||||| ||| ||| | ||| || |||| | ||||||||||||
Sbjct 747 CATTTGATTGCCATTTCTAAAGCT-AGACCCTTT-TTCATGAGAATTGTTGATGCTTGTG 804
Query 701 AGAAGCTT-AGAGGTGCTTACTCGATGGT-TTTCGTCTTTGAAGACAAGCTTATTGCTGT 758
|||||||| | ||||||||| |||||||| ||| || ||| || |||||| |||||||
Sbjct 805 AGAAGCTTCA-AGGTGCTTATTCGATGGTGTTT-GTGACTGAGGATAAGCTTGTTGCTGT 862
Query 759 TCGTGACCCGTTTGGGTTTAGACCACTT-GTGATGGGCAGAAGAAGCAACGGAGCAGTTG 817
||||||||| ||||||||| || || || ||||| || ||||| || ||||| ||||
Sbjct 863 TCGTGACCCACATGGGTTTAGGCC-TTTAGTTATGGGTAGGAGAAGTAATGGAGCTGTTG 921
Query 818 TTTTTGCCTCCGAGACTTGCGCTCTGGACCTGATTGATGCTATTTATGA-ACGTGAAGTG 876
| ||||| || |||||||| ||||| || ||||||| |||| |||||| | | || ||
Sbjct 922 TGTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGA-GAGAGGTT 980
Query 877 TGTCCCGGAGAGATTGTGGTGGTGGATAGAAATCATGGAGAC-AGT-TCAATGTTCATGA 934
| ||| || ||| || | || |||||| ||| |||| | | | | ||| |||| |||
Sbjct 981 TATCCTGGTGAGGTTTTAGTTGTGGAT--AAA-GATGGTGTCAAATGTCAGTGTT--TGA 1035
Query 935 T-CTCTCACCCTGAACCAAAACAGTGCGTTTTTGAGCATGGTTACTTCTCACAGCCCAAC 993
| | |||| ||||| ||||| || ||| |||| || ||| ||||||||| ||| ||
Sbjct 1036 TGC-CTCATCCTGAGCCAAAGCAATGCATTTTCGAACATATTTACTTCTCGTTGCCTAAT 1094
Query 994 TCAATTGTCTTTGGCCGTTCTGTGTATGAAAC-ACGCCGCATG--TACGGCGAGATCCTA 1050
|| ||||||||||| || ||||||||||| | | | ||||| | || ||||| ||
Sbjct 1095 TCGATTGTCTTTGGTCGGTCTGTGTATGAGTCTA-G--GCATGTCTTTGGTGAGATTTTA 1151
Query 1051 GCCACCGTGGCACCTGTCGATTGTGATGTCGTCATCGCAGTGCCAGACTCGGG-GACAGT 1109
|| || | | ||||||| ||||||||||| || ||||| ||||| |||||||| | ||
Sbjct 1152 GCTACTGAGTCACCTGTTGATTGTGATGTGGTGATCGCTGTGCCTGACTCGGGTG-TTGT 1210
Query 1110 GGCAGCTCTTGGATATGCAGCCAAAGCTGGAGT-GCCGTTCCAG-ATTGGTCTT-CTCAG 1166
||| |||||||| || || || |||||||| || | |||| ||| | ||| || | ||
Sbjct 1211 GGCTGCTCTTGGTTACGCGGCTAAAGCTGGTGTAG-CGTTTCAGCA-AGGT-TTGATTAG 1267
Query 1167 GTCACACTATG-CAAAACGCACGTTT-ATAGAGCCGACTCAGAAAATCCGTGATTTCGCG 1224
||| || |||| || | || ||| || |||||| ||||||||||| | ||||| | |
Sbjct 1268 GTCTCATTATGTTGGAA-GGAC-TTTCATTGAGCCGTCTCAGAAAATCAGAGATTTTG-G 1324
Query 1225 -GTGAAGGTGAAGCTATCTCCTGTCCGAGCAGTCCTT-GAAGGGAAGCGGGTGGTAGTAG 1282
|||||| |||||||||| || ||||||| ||| || |||||||| | || || || |
Sbjct 1325 AGTGAAGCTGAAGCTATCGCCAGTCCGAGGAGT-TTTAGAAGGGAAAAGAGTTGTTGTTG 1383
Query 1283 TGGACGACTCTATTGTCCGCGGTACCAC-GAGTTTGAAGATAGTTCGGATGCTT-AGAGA 1340
| || || || ||||| | || || || | | ||||| || | | | || |||||
Sbjct 1384 TTGATGATTCGATTGTTAGAGGAACAACTTCG-TCCAAGATTGTGC-GTTTATTGAGAGA 1441
Query 1341 CGCCGGAGC-AAAGGAGGTTCATATGA-GAGTCGC-ATTGCCACCGATGATTGCATCTTG 1397
|| || || ||| |||||||| |||| || |||| | | || || || |||||||||||
Sbjct 1442 AGCGGGTGCGAAA-GAGGTTCACATGAGGA-TCGCGAGT-CCTCCTATTATTGCATCTTG 1498
Query 1398 TTACTACGGAGTGGACACCCCGAGGAGCCAA-GAGTTGATCTCTAGTAAGATGAGCGTTG 1456
|||||||||||||||||| || || | || |||||||| || | || |||||| ||||
Sbjct 1499 TTACTACGGAGTGGACACGCCTAGCT-CAAATGAGTTGATATCGAATAGGATGAGTGTTG 1557
Query 1457 AGGCAATC 1464
| | ||||
Sbjct 1558 ATGAAATC 1565
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81174281265
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5