BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943869 Length=1534 Score E Sequences producing significant alignments: (Bits) Value AT4G39010.1 | Symbols: AtGH9B18, GH9B18 | glycosyl hydrolase 9B... 2401 0.0 > AT4G39010.1 | Symbols: AtGH9B18, GH9B18 | glycosyl hydrolase 9B18 | chr4:18175902-18179183 REVERSE LENGTH=1835 Length=1835 Score = 2401 bits (1300), Expect = 0.0 Identities = 1460/1538 (95%), Gaps = 7/1538 (0%) Strand=Plus/Plus Query 3 CACCGACGCCGATACACCATGAAATTACATTTATACCCTCTCTCACTTGTCTTCAGCTTC 62 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 64 CACCGACGCCGATACACCATGAAATTACATTTACACCCTCTCTCACTTGTCTTCTTCTTT 123 Query 63 TTCCTCCTCCTCCTCCGTCCGACAATGTCGTCGAACCAGCACGATTACTCCGACGCACTC 122 ||| || || || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 124 TTCTTCTTCTTCTTCCGACCGACAATGTCGTCGAACCAGCACGATTACTCCGACGCACTC 183 Query 123 TCAAAATCAATCCTCTTCTTCGAAGGCCAACGCTCCGGTTACCTCCCAAACGACCAGCGT 182 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 184 TCAAAATCAATTCTCTTCTTCGAAGGCCAGCGCTCCGGTTACCTCCCAAACGACCAGCGT 243 Query 183 ATGACGTGGCGTCGTAATTCCGGTCTGAGCGACGGTTGGACACACAACA-CAGATTTAAC 241 ||||| ||||| ||||| ||||||||||||||||||||||||||||||| | |||||||| Sbjct 244 ATGACCTGGCGCCGTAACTCCGGTCTGAGCGACGGTTGGACACACAACATC-GATTTAAC 302 Query 242 CGGCGGTTATTACGACGCCGGAGACAACGTCAAATTCAATTTCCCGATGGCTTTCACAAC 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 303 CGGCGGTTATTACGACGCCGGAGACAACGTCAAATTCAATTTCCCGATGGCTTTCACCAC 362 Query 302 CACAATGCTCGCGTGGAGCGTAATTGAATTCGGCGAACTCATGCCTTCGTCGGAGCTACG 361 |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 363 CACAATGCTCGCCTGGAGCGTAATTGAGTTCGGCGAATTCATGCCTTCGTCGGAGCTACG 422 Query 362 AAACTCCCTCGTGGCTCTCCGGTGGAGCTCTAATTACCTCCTCAAATCCGTTTCTCAGCT 421 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 423 TAACTCTCTCGTGGCTCTCCGGTGGAGCTCTAATTACCTCCTCAAATCCGTTTCACAGCT 482 Query 422 ACCAAACCGGATCTTCGTCCAGGTAGGTGATCCAATAGCAGATCATAACTGCTGGGAAAG 481 ||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 483 ACCTAACCGGATCTTCGTCCAGGTAGGTGATCCGATAGCAGATCATAATTGCTGGGAAAG 542 Query 482 ACCAGAAGATATGGATACACCACGGACTGCTTACGTTGTTAATGCCCCAAATCCGGCTTC 541 ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 543 ACCAGAAGACATGGATACACCACGGACTGCTTACGCCGTTAATGCCCCGAATCCGGCTTC 602 Query 542 TGAAGTGGCCGGAGAAACAACGGCAGCCCTCTCAGCTGCTTCAATTGCTTTTCGATCATC 601 |||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| Sbjct 603 TGAAGTTGCCGGAGAAACTACGGCGGCCCTCTCAGCTGCTTCGATTGCTTTCCGATCATC 662 Query 602 GGATGCAGGATACTCTCAGACATTGCTCCAAAATGCCGTCAAAACTTTCCAGTTCGCTGA 661 |||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 663 GGATCCAGGATACTCTCAAACATTGCTCCAAAATGCTGTCAAAACTTTTCAGTTCGCTGA 722 Query 662 TATGTATCGCGGTGCTTATAGCAGCAATGATGATATCAAAAATGACGTTTGCCCTTTCTA 721 |||||||||||||||||||||||||||||| |||||||||||||| || || |||||||| Sbjct 723 TATGTATCGCGGTGCTTATAGCAGCAATGACGATATCAAAAATGATGTGTGTCCTTTCTA 782 Query 722 CTGCGATTTCAACGGATTTCAGGATGAGTTATTGTGGGGAGCAGCTTGGTTGAGAAAAGC 781 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 783 CTGCGATTTCAACGGATTTCAGGATGAGTTATTGTGGGGAGCAGCTTGGCTAAGAAAAGC 842 Query 782 GACTGGTGATGAAAGCTACCTTAATTACATAGAGAGTAACCGTGAACCGTTTGGTGCTAG 841 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 GACTGGTGATGAAAGCTACCTTAATTACATAGAGAGTAACCGTGAACCGTTTGGTGCTAA 902 Query 842 CGATAACGTAGACGAATTTGGCTGGGACAACAAAGTTGGTGGACTTAATGTTCTCGTTTC 901 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 903 CGATAACGTAGACGAATTTGGCTGGGACAACAAAGTTGGTGGACTTAATGTTCTCGTTTC 962 Query 902 AAAGGAAGTTATACAAGGAAATATGTACAACTTAGAGGCGTACAAGGCATCGGCGGAGAG 961 ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 963 GAAGGAAGTTATTGAAGGAAATATGTACAACTTAGAGGCGTACAAGGCATCAGCAGAGAG 1022 Query 962 CTTCATGTGTAGTCTGGTCCCGGAATCTTCAGGACCGCATGTTGAGTATACTCCCGCCGG 1021 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || Sbjct 1023 CTTCATGTGTAGTCTGGTCCCGGAATCTTCGGGACCGCATGTTGAGTATACTTCCGCTGG 1082 Query 1022 TCTACTTTACAAACCCGGCGGTAGCCAGCTCCAACATGCGACCACCATATCTTTCCTCCT 1081 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1083 TCTACTTTACAAGCCCGGCGGTAGCCAGCTCCAACATGCGACCACCATATCTTTCCTCCT 1142 Query 1082 CCTTGTATACGCGCAATATCTTTCAAGAAGCTCTCTCTCCCTCAATTGCGGCACCCTTAC 1141 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 CCTCGTATACGCTCAATATCTTTCAAGAAGCTCTCTCTCCCTCAATTGCGGCACCCTTAC 1202 Query 1142 CATCCCTCCTGATCATCTCCGCCGTCTTGCCAAGAAACAGGTGGACTATATATTGGGGGA 1201 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1203 CGTCCCTCCTGATTATCTCCGCCGTCTTGCCAAGAAACAGGTGGACTATATATTGGGGAA 1262 Query 1202 TAATCCGATGGGATTATCGTACATGGTCGGATACGGAGAGAGATATCCAAAGAGGATCCA 1261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 TAATCCGATGGGATTATCGTACATGGTCGGATACGGAGAGAGATATCCAAAGAGGATCCA 1322 Query 1262 CCACCGTGGCTCATCATTGCCATCGATCAAGGATCATCCAGAAGCCATCAGATGCAAAGA 1321 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 1323 TCACCGTGGCTCATCATTGCCATCGATTGTGGACCATCCAGAAGCCATCAGATGCAAAGA 1382 Query 1322 TGGGTCGGTTTATTTCAATTCCACCGAACCAAACCCGAACGTTTTGATTGGAGCGGTGGT 1381 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 1383 CGGGTCGGTTTATTTCAATTCTACCGAACCGAACCCGAACGTTTTGATTGGAGCGGTGGT 1442 Query 1382 GGGTGGGCCTGGAGAGGACGATAAGTACGATGATGATCGGTCCGATTTCCGCAAGTCCGA 1441 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1443 GGGTGGGCCCGGAGAGGACGATATGTACGATGATGATCGGTCCGATTTCCGCAAGTCCGA 1502 Query 1442 GCCCACTACTTACATCAATGCTCCTTTCGTTGGCGTATTGGCGTACTTTGCAGCCAATCC 1501 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1503 GCCCACTACTTACATCAATGCTCCTTTCGTTGGCGTTTTGGCGTACTTTGCAGCCAATCC 1562 Query 1502 TGGTTCTAGCTAA-C-GTC-A--TGGGAGTAGAATTGG 1534 ||||||||||||| | | | | |||||||| |||||| Sbjct 1563 TGGTTCTAGCTAAGCTGACGACATGGGAGTAAAATTGG 1600 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75702421860 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5