BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg943915
Length=3630
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39400.1 | Symbols: BRI1, CBB2, DWF2, BIN1, ATBRI1 | Leucine... 5860 0.0
AT3G13380.1 | Symbols: BRL3 | BRI1-like 3 | chr3:4346557-435092... 307 4e-82
> AT4G39400.1 | Symbols: BRI1, CBB2, DWF2, BIN1, ATBRI1 | Leucine-rich
receptor-like protein kinase family protein | chr4:18324661-18328826
FORWARD LENGTH=4166
Length=4166
Score = 5860 bits (3173), Expect = 0.0
Identities = 3485/3638 (96%), Gaps = 12/3638 (0%)
Strand=Plus/Plus
Query 1 TCTCTCTCAAAAAACTC-TGAG-AATGAAGActttttcaagcttctttctctctgtaaca 58
|||||||| | |||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 143 TCTCTCTC-ACAAACTCTTGAGAAATGAAGACTTTTTCAAGCTTCTTTCTCTCTGTAACA 201
Query 59 actctcttcttcttctccttcttttctctttcATTTCAAGCTTCACCATCTCAGTCTTTA 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 ACTCTCTTCTTCTTCTCCTTCTTTTCTCTTTCATTTCAAGCTTCACCATCTCAGTCTTTA 261
Query 119 TACAGAGAAATCCATCAGCTTATAAGCTTCAAAAACGTTCTTCCTGACAAGAATCTTCTC 178
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 262 TACAGAGAAATCCATCAGCTTATAAGCTTCAAAGACGTTCTTCCTGACAAGAATCTTCTC 321
Query 179 TCAGACTGGTCTTCCAACAAAAACCCGTGTACTTTCGATGGCGTTACTTGTAAAGACGAC 238
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 322 CCAGACTGGTCTTCCAACAAAAACCCGTGTACTTTCGATGGCGTTACTTGCAGAGACGAC 381
Query 239 AAAGTTACTTCGATTGATCTCAGTTCCAAGCCTCTCAACGTCGGATTCAGTGCCGTGGCT 298
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 382 AAAGTTACTTCGATTGATCTCAGCTCCAAGCCTCTCAACGTCGGATTCAGTGCCGTGTCC 441
Query 299 TCATCTCTCATGTCTCTCACCGGATTAGAGTCTCTGTTTCTCTCAAACTCACACATCAAT 358
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 TCGTCTCTCCTGTCTCTCACCGGATTAGAGTCTCTGTTTCTCTCAAACTCACACATCAAT 501
Query 359 GGCTCCATTTCTGGCTTCAAGTGCTCTGCTTCTTTAACCAGTTTGGATCTATCAAGAAAC 418
|||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 502 GGCTCCGTTTCTGGCTTCAAGTGCTCTGCTTCTTTAACCAGCTTGGATCTATCTAGAAAC 561
Query 419 TCTCTGTCGGGTCCTGTAACGACTCTAACAAGTCTTGGTTCTTGTTCCGGTCTGAAATTT 478
||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 562 TCTCTTTCGGGTCCTGTAACGACTCTAACAAGCCTTGGTTCTTGCTCCGGTCTGAAGTTT 621
Query 479 CTTAACGTCTCCTCCAATACTCTTGATTTTCCCGGGAAAGTTTCAGGTGGGTTGAAGCTA 538
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 622 CTTAACGTCTCTTCCAATACACTTGATTTTCCCGGGAAAGTTTCAGGTGGGTTGAAGCTA 681
Query 539 AACAGCTTGGAAGTTCTGGATCTTTCTTCGAATTCACTCTCCGGTGCTAACGTCGTTGCT 598
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
Sbjct 682 AACAGCTTGGAAGTTCTGGATCTTTCTGCGAATTCAATCTCCGGTGCTAACGTCGTTGGT 741
Query 599 TGGGTTCTCTCCGATGGCTGTGGAGAGTTGAAGCATTTAGCGATTAGCGGAAACAAAATC 658
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 742 TGGGTTCTCTCCGATGGGTGTGGAGAGTTGAAACATTTAGCGATTAGCGGAAACAAAATC 801
Query 659 AGTGGAGACGTTGATGTTTCTCGTTGCGTGAATCTCGAGTTTCTCGATGTTTCCTCGAAC 718
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 802 AGTGGAGACGTCGATGTTTCTCGCTGCGTGAATCTCGAGTTTCTCGATGTTTCCTCCAAC 861
Query 719 AATTTCTCCACTGGGATTCCTTTTCTTGGAGATTGCTCTGCTCTGCAACATCTTGACATC 778
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 862 AATTTCTCCACTGGGATTCCTTTCCTCGGAGATTGCTCTGCTCTGCAACATCTTGACATC 921
Query 779 TCCGGGAACAAATTATCCGGCGATTTCTCTCGTGCTATCTCTACTTGCACAGAGCTCAAG 838
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 922 TCCGGGAACAAATTATCCGGCGATTTCTCCCGTGCTATCTCTACTTGCACAGAGCTCAAG 981
Query 839 TTGTTGAACATCTCCGGTAACCAATTCGTCGGACCAATCCCACCACTACCGCTTAAAAGT 898
|||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||
Sbjct 982 TTGTTGAACATCTCTAGTAACCAATTCGTCGGACCAATCCCTCCGCTACCGCTTAAAAGT 1041
Query 899 CTCCAATACCTCTCTCTGGCTGAGAACAAATTCACCGGCGAGATCCCTGAGTTTCTCTCC 958
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1042 CTCCAATACCTCTCTCTGGCCGAGAACAAATTCACCGGCGAGATCCCTGACTTTCTCTCC 1101
Query 959 GGCGCGTGTGATACACTCACTGGTCTTGATCTCTCTGGAAATGTTTTCTACGGTACGGTT 1018
|||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||
Sbjct 1102 GGCGCGTGTGATACACTCACTGGTCTCGATCTCTCTGGAAATCATTTCTACGGTGCGGTT 1161
Query 1019 CCTCCATTCTTCGGTTCTTGTTCTCTTCTGGAATCACTCGCGTTGTCGAGTAACAACTTC 1078
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1162 CCTCCATTCTTCGGTTCATGTTCTCTTCTCGAATCACTCGCGTTGTCGAGTAACAACTTC 1221
Query 1079 TCCGGCGAGTTACCGATGGATACGTTGTTGAAGATGAGAGGACTCAAAGTACTTGATCTG 1138
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 TCTGGCGAGTTACCGATGGATACGTTGTTGAAGATGAGAGGACTCAAAGTACTTGATCTG 1281
Query 1139 TCTTTCAACGAGTTTTCCGGTGAATTACCGGAATCTCTGACGAATCTATCCGCTTCGTTG 1198
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1282 TCTTTCAACGAGTTTTCCGGCGAATTACCGGAATCTCTGACGAATCTATCCGCTTCGTTG 1341
Query 1199 CTAACGTTAGATCTCAGCTCCAACAATTTCTCCGGTCCGATTCTCCCGAATCTCTGCCGG 1258
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1342 CTAACGTTAGATCTCAGCTCCAACAATTTCTCCGGTCCGATTCTCCCAAATCTCTGCCAG 1401
Query 1259 AACCCTAAAAACACTCTGCAGGAGCTTTATCTTCAGAACAATGGCTTCACCGGGAAGATT 1318
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1402 AACCCTAAAAACACTCTGCAGGAGCTTTACCTTCAGAACAATGGCTTCACCGGGAAGATT 1461
Query 1319 CCACCGACTTTAAGCAACTGTTCTGAGCTGGTTTCGCTTCACTTGAGCTTCAATTACCTC 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1462 CCACCGACTTTAAGCAACTGTTCTGAGCTGGTTTCGCTTCACTTGAGCTTCAATTACCTC 1521
Query 1379 TCCGGGACAATCCCTTCGAGCTTAGGCTCTCTGTCGAAGCTTCGAGATCTGAAACTGTGG 1438
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1522 TCCGGGACAATCCCTTCGAGCTTAGGCTCTCTATCGAAGCTTCGAGATCTGAAACTATGG 1581
Query 1439 CTGAATATGTTAGAAGGAGAGATCCCTCAGGAGCTCATGAATGTCAAGACCTTGGAGACT 1498
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1582 CTGAATATGTTAGAAGGAGAGATCCCTCAGGAGCTCATGTATGTCAAGACCTTAGAGACT 1641
Query 1499 CTGATTCTCGACTTCAACGACTTAACCGGTGAAATCCCTTCCGGTTTAAGTAACTGTACC 1558
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1642 CTGATCCTCGACTTCAACGATTTAACCGGTGAAATCCCTTCCGGTTTAAGTAACTGTACC 1701
Query 1559 AATCTGAACTGGATTTCTCTCTCGAATAACCGGTTAACCGGTCAGATTCC-AAGGTGGAT 1617
||||| |||||||||||||| ||||||||||||||||||||| ||||||| || |||||
Sbjct 1702 AATCTTAACTGGATTTCTCTGTCGAATAACCGGTTAACCGGTGAGATTCCGAAA-TGGAT 1760
Query 1618 CGGCCGGTTAGAGAATCTCGCTATCCTCAAGCTGAGCAACAATTCATTCTACGGAAACAT 1677
|||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||
Sbjct 1761 TGGCCGGTTAGAGAATCTCGCTATCCTCAAGCTAAGCAACAATTCATTCTCCGGGAACAT 1820
Query 1678 TCCGGCTGAGCTCGGCGACTGCAGAAGCTTAATCTGGCTTGATCTCAACACCAAT-TCCT 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1821 TCCGGCTGAGCTCGGCGACTGCAGAAGCTTAATCTGGCTTGATCTCAACACCAATCTC-T 1879
Query 1737 TCAACGGAACGATTCCGGCGGAAATGTTCAAACAATCCGGGAAAATCGCTGTCAATTTCA 1796
|||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct 1880 TCAATGGAACGATTCCGGCGGCGATGTTTAAACAATCCGGGAAAATCGCTGCCAATTTCA 1939
Query 1797 TCGCCGGTAAGAGGTACGTTTACATTAAAAACGATGGGATGAAGAAACAGTGTCACGGAG 1856
|||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||
Sbjct 1940 TCGCCGGTAAGAGGTACGTTTATATCAAAAACGATGGGATGAAGAAAGAGTGTCATGGAG 1999
Query 1857 CTGGTAATTTACTTGAGTTTCAAGGAATCAGA-CCGGAACAACTAAACCGGGTTTCGACG 1915
|||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| |||
Sbjct 2000 CTGGTAATTTACTTGAGTTTCAAGGAATCAGATCCG-AACAATTAAACCGGCTTTCAACG 2058
Query 1916 AGGAACCCTTGTAATTTCAC---CAGAGTCTATGGAGGTCACACTTCGCCGACGTTTGAT 1972
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 2059 AGGAACCCTTGTAATATCACTAGCAGAGTCTATGGAGGTCACACTTCGCCGACGTTTGAT 2118
Query 1973 AACAACGGTTCGATGATGTTTCTGGACATGTCTTATAACATGTTGTCTGGATACATACCA 2032
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2119 AACAATGGTTCGATGATGTTTCTGGACATGTCTTACAACATGTTGTCTGGATACATACCG 2178
Query 2033 AAGGAGATTGGTTCGATGCCTTATCTGTTTATTCTCAATTTGGGTCATAACTTTATCTCT 2092
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2179 AAGGAGATTGGTTCGATGCCTTATCTGTTTATTCTCAATTTGGGTCATAACGATATCTCT 2238
Query 2093 GGTTCGATTCCTGATGAGGTAGGTGATCTGAGAGGGTTAAACATTCTTGATCTCTCAAGC 2152
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct 2239 GGTTCGATTCCTGATGAGGTAGGTGATCTAAGAGGTTTAAACATTCTTGATCTTTCAAGC 2298
Query 2153 AATAAGCTCGAAGGGAGGATTCCTCAGGCTATGTCAGCGCTTACTATGCTTACGGAAATC 2212
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2299 AATAAGCTCGATGGGAGGATTCCTCAGGCTATGTCAGCTCTTACTATGCTTACGGAAATC 2358
Query 2213 GATTTGTCGAATAATAATTTGTCTGGTCCGATTCCTGAGATGGGTCAGTTTGAGACTTTT 2272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2359 GATTTGTCGAATAATAATTTGTCTGGTCCGATTCCTGAGATGGGTCAGTTTGAGACTTTT 2418
Query 2273 CCACCGGCTAAGTTCTTGAACAATTCTGGTCTCTGTGGTTATCCGCTTCCGCGGTGTGAT 2332
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2419 CCACCGGCTAAGTTCTTGAACAATCCTGGTCTCTGTGGTTATCCTCTTCCGCGGTGTGAT 2478
Query 2333 CCCTCAAATGCAAACGGGTATGCTCATCATCAGAGATCTCATGGAAGGAGACCAGCGTCT 2392
|| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2479 CCTTCAAATGCAGACGGTTATGCTCATCATCAGAGATCTCATGGAAGGAGACCAGCGTCC 2538
Query 2393 CTTGCTGGTAGCGTGGCGATGGGATTGTTGTTCTCTTTTGTGTGTATATTTGGGTTGATC 2452
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2539 CTTGCTGGTAGTGTGGCGATGGGATTGTTGTTCTCTTTTGTGTGTATATTTGGGCTGATC 2598
Query 2453 CTTGTTGGTAGAGAGATGAGGAAGAGACGGAGAAAGAAAGAGGCGGAATTGGAGATGTAT 2512
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2599 CTTGTTGGTAGAGAGATGAGGAAGAGACGGAGAAAGAAAGAGGCGGAGTTGGAGATGTAT 2658
Query 2513 GCGGAAGGACATGGAAACTCTGGCGATAGAACCGCTAACAACACCAATTGGAAGCTGACG 2572
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2659 GCGGAAGGACATGGAAACTCTGGCGATAGAACTGCTAACAACACCAATTGGAAGCTGACT 2718
Query 2573 GGTGTGAAAGAAGCCTTGAGTATCAATCTTGCTGCTTTCGAGAAGCCATTGCGGAAACTC 2632
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2719 GGTGTGAAAGAAGCCTTGAGTATCAATCTTGCTGCTTTCGAGAAGCCATTGCGGAAGCTC 2778
Query 2633 ACGTTTGCGGATCTTCTTAAGGCCACAAACGGTTTTGACAACGATAGTCTGATTGGATCC 2692
|||||||||||||||||| |||| || || ||||| | || |||||||||||||| ||
Sbjct 2779 ACGTTTGCGGATCTTCTTCAGGCTACCAATGGTTTCCATAATGATAGTCTGATTGGTTCT 2838
Query 2693 GGTGGGTTTGGAGATGTTTACAAAGCGATTTTGAAAGATGGAAGCGCGGTGGCTATCAAG 2752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2839 GGTGGGTTTGGAGATGTTTACAAAGCGATTTTGAAAGATGGAAGCGCGGTGGCTATCAAG 2898
Query 2753 AAACTGATTCATGTTAGCGGTCAAGGTGACAGAGAGTTCATGGCAGAGATGGAAACGATT 2812
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 2899 AAACTGATTCATGTTAGCGGTCAAGGTGATAGAGAGTTCATGGCGGAGATGGAAACCATT 2958
Query 2813 GGGAAGATAAAACACCGAAATCTTGTTCCGCTTCTTGGTTACTGCAAAGTTGGAGACGAG 2872
|||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct 2959 GGGAAGATCAAACATCGAAATCTTGTGCCTCTTCTTGGTTATTGCAAAGTTGGAGACGAG 3018
Query 2873 CGGCTTCTTGTGTATGAGTTCATGAAGTATGGAAGTTTGGAAGATGTTTTGCACGACCCG 2932
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 3019 CGGCTTCTTGTGTATGAGTTTATGAAGTATGGAAGTTTAGAAGATGTTTTGCACGACCCC 3078
Query 2933 AAGAAAGCTGGCGTGAAACTAAACTGGTCCACACGGCGGAAAATCGCAATCGGATCAGCT 2992
||||||||||| ||||||||||||||||||||||||||||| || || || |||||||||
Sbjct 3079 AAGAAAGCTGGGGTGAAACTAAACTGGTCCACACGGCGGAAGATTGCGATAGGATCAGCT 3138
Query 2993 AGAGGGCTTGCTTTTCTTCACCACAACTGCAGTCCGCATATCATCCACAGAGACATGAAA 3052
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3139 AGAGGGCTTGCTTTCCTTCACCACAACTGCAGTCCGCATATCATCCACAGAGACATGAAA 3198
Query 3053 TCTAGTAATGTGTTGCTGGATGAGAATTTGGAAGCTCGGGTTTCAGATTTTGGCATGGCA 3112
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3199 TCCAGTAATGTGTTGCTTGATGAGAATTTGGAAGCTCGGGTTTCAGATTTTGGCATGGCG 3258
Query 3113 AGGCTGATGAGCGCGATGGATACACATTTAAGTGTCAGTACATTAGCTGGTACGCCGGGT 3172
||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct 3259 AGGCTGATGAGTGCGATGGATACGCATTTAAGCGTCAGTACATTAGCTGGTACACCGGGT 3318
Query 3173 TACGTTCCTCCGGAGTATTACCAAAGTTTCAGGTGTTCAACAAAAGGAGACGTTTATAGT 3232
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3319 TACGTTCCTCCAGAGTATTACCAAAGTTTCAGGTGTTCAACAAAAGGAGACGTTTATAGT 3378
Query 3233 TACGGTGTGGTCTTACTCGAGCTACTCACAGGTAAACGGCCAACCGATTCACCGGATTTT 3292
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 3379 TACGGTGTGGTCTTACTCGAGCTACTCACGGGTAAACGGCCAACGGATTCACCGGATTTT 3438
Query 3293 GGAGATAACAACCTTGTTGGATGGGTGAAACAGCACGCAAAACTGCGGATTAGCGACGTG 3352
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3439 GGAGATAACAACCTTGTTGGATGGGTGAAACAGCACGCAAAACTGCGGATTAGCGATGTG 3498
Query 3353 TTTGACCCTGAGCTTATGAAGGAAGATCCAGCATTAGAGATCGAACTTTTACAACATTTA 3412
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3499 TTTGACCCCGAGCTTATGAAGGAAGATCCAGCATTAGAGATCGAACTTTTACAACATTTA 3558
Query 3413 AAAGTTGCGGTTGCGTGTTTGGATGATAGGGCTTGGAGACGACCGACAATGGTACAAGTC 3472
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3559 AAAGTTGCGGTTGCGTGTTTGGATGATCGGGCTTGGAGACGACCGACAATGGTACAAGTC 3618
Query 3473 ATGGCCATGTTTAAGGAGATACAAGCCGGGTCAGGGATAGATTCACAGTCGACGATCGGA 3532
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 3619 ATGGCCATGTTTAAGGAGATACAAGCCGGGTCAGGGATAGATTCACAGTCAACGATCAGA 3678
Query 3533 TCAATAGAAGATGGAGGGTTCAGTACAATAGAGATGGTTGATATGAGTATTAAAGAAGTT 3592
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3679 TCAATAGAGGATGGAGGGTTCAGTACAATAGAGATGGTTGATATGAGTATAAAAGAAGTT 3738
Query 3593 CCTGAAGGCAAATTATGAGAGTTAGAAACAGAGCCAAA 3630
|||||||| |||||||||||||||||||||||||||||
Sbjct 3739 CCTGAAGGAAAATTATGAGAGTTAGAAACAGAGCCAAA 3776
> AT3G13380.1 | Symbols: BRL3 | BRI1-like 3 | chr3:4346557-4350923
FORWARD LENGTH=4274
Length=4274
Score = 307 bits (166), Expect = 4e-82
Identities = 570/762 (75%), Gaps = 40/762 (5%)
Strand=Plus/Plus
Query 2588 TTGAGTATCAATC-TTGCTGC-TTTCGAGAAGCCATTGCGGAAACTCACGTTTGCGGATC 2645
||||| ||||| | |||| | ||| |||||||| |||| ||||| || ||||| | |
Sbjct 3084 TTGAGCATCAA-CGTTGCAACATTT-GAGAAGCCGCTGCGAAAACTTACTTTTGCACACC 3141
Query 2646 TTCTTA-AGGCCACAAACGGTTTTGACAAC-GATAGTCTGATTGGATCCGGTGGGTTTGG 2703
|| ||| | ||||||||||| ||| | | |||||| |||| ||||| ||||| |||||
Sbjct 3142 TT-TTAGAAGCCACAAACGGGTTT-AGTGCTGATAGTATGATCGGATCAGGTGGATTTGG 3199
Query 2704 AGATGTTTACAAAGCGATTTTGAAAGATGGAAGC-GCGGTGGCTATCAAGAAACTGATTC 2762
|||||| ||||| || | || ||||| | | | || || |||||||| ||||||
Sbjct 3200 AGATGTCTACAAGGCTAAACTGGCTGATGG-ATCTGTTGTAGCGATCAAGAAGTTGATTC 3258
Query 2763 ATGTTAGC-GGTCAAGGTGACAGAGAGTTCATGGCAGAGATGGAAACGATTGGGAAGATA 2821
| || | | || |||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 3259 AAGTCA-CGGGACAAGGTGATAGAGAGTTCATGGCAGAGATGGAAACGATTGGTAAAATC 3317
Query 2822 AAACACCGAAATCTTGTT-CCGCTTCTTGGTTACTGCAA-AGTTGGAGACGAGCGGCTTC 2879
||||| |||||| ||| | || |||||||| || ||||| | |||| || ||| | ||||
Sbjct 3318 AAACATCGAAAT-TTGGTACCTCTTCTTGGATATTGCAAGA-TTGGTGAAGAGAGACTTC 3375
Query 2880 TTGTGTATGAGTTCATGAAGTATGGAAGTTTGGA-AGATGTTTTGCACGACCCGA--A-G 2935
|||| ||||||| |||||| || ||||| || || | | ||| ||||||| || | |
Sbjct 3376 TTGTCTATGAGTACATGAAATACGGAAGCTTAGAGACA-GTTCTGCACGAAAAGACCAAG 3434
Query 2936 AAAGCTGGCGTGAAACTAAACTGGTCCACACG-GCG-GAAAATCGCAATCGGATCAGCTA 2993
|| | ||| | || | ||||| | || | ||| || ||||| ||| | ||
Sbjct 3435 AAGGGTGGAATCTTTCTTGATTGGTC-AG-CGAGAAAGAAGATTGCAATAGGAGCTGCGC 3492
Query 2994 GAGGGCTTGCTTTTCTTCACCACAACTGCAGTCCGCATATCATCCACAGAGACATGAAAT 3053
| ||||| |||||||| ||||| | ||||| ||| ||||| |||||||| || |||||||
Sbjct 3493 GTGGGCTAGCTTTTCTGCACCATAGCTGCATTCCTCATATTATCCACAGGGATATGAAAT 3552
Query 3054 CTAGTAATGTG-TTGCTGGATGA-GAATTTGGAAGCTCGGGTTTCAGATTTTGGCATGGC 3111
| || || || || || || | || |||| || || || ||||||||||| |||||
Sbjct 3553 CAAGCAACGTTCTT-CTAGACCAAGATTTTGTT-GCCCGTGTCTCAGATTTTGGTATGGC 3610
Query 3112 AAGGCTGATGAGCGCGATGGATACACATTTAAGTGTCAGTACATTAGCTGGTACGCC-GG 3170
||||||| ||||||| |||| ||||| || || || || || | || ||||| || ||
Sbjct 3611 AAGGCTGGTGAGCGCTCTGGACACACACTTGAGCGTGAGCACGCTCGCAGGTACTCCCGG 3670
Query 3171 GTTACGTTCCTCCGGAGTATTACCAAAGTTTCAGGTGTTCAACAAAAGGAGACGTTTATA 3230
|| | || || || ||||||||||| |||||| | ||| || | |||||||| || ||||
Sbjct 3671 GT-ATGTCCCACCAGAGTATTACCAGAGTTTCCGATGTACAGCCAAAGGAGATGTGTATA 3729
Query 3231 GTTACGGTGTGGT-CTTACTCGAGCTACTCACAGGTAA-ACGGCCAACCGATTCACCGGA 3288
| ||||| || | ||| || ||||| ||| |||| || | || | |||| || |||
Sbjct 3730 GCTACGGAGTTATACTT-CTGGAGCTCCTCTCAGGCAAGAAA-CCGATCGATCCAGAGGA 3787
Query 3289 TTTTGG--A-GATAACAACCTTGTTGGATGGG-TGAAACAGC 3326
||||| | || ||||||||||| ||||||| | |||||||
Sbjct 3788 GTTTGGTGAAGACAACAACCTTGTGGGATGGGCT-AAACAGC 3828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 180751495629
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5