BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg943948 Length=1175 Score E Sequences producing significant alignments: (Bits) Value AT4G39580.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1801 0.0 > AT4G39580.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:18385684-18386811 REVERSE LENGTH=1128 Length=1128 Score = 1801 bits (975), Expect = 0.0 Identities = 1079/1130 (95%), Gaps = 4/1130 (0%) Strand=Plus/Plus Query 28 ATGAACGAAGAGGAGGCACCATCTGAGCAGAAGAAGACGTTATCATTGGTACCCTCACCG 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAACGAAGAGGAGGCACCATCTGAGCAGAAGAAGACGTTATCATTGGTACCCTCACCG 60 Query 88 ATCACAAATCTCTTTCTTCCTGATGACATACTTTTGAGCTCCT-TAAGCCGCATTTCAAG 146 | ||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 61 ACCACGAATCTGTTTCTTCCTGATGACATACTTTTGAGCT-CTCTAAGCCGCATTTCAAG 119 Query 147 ATTGTATTACCCAACTTTCTCCCTTGTCTCCAAGAGTTTCCGGTCTCTCGTTGCTTCACC 206 ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct 120 ATTGTATTACCCAACTTTCTCTCTTGTCTCCAAGAGTTTCCGCTCTCTAATTGCTTCACC 179 Query 207 AGAGCTTTATCTGACTCGGTCCATCCTCGGCCGCACCGAGAGTTGTCTTTATGTGTCCTT 266 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 180 AGAGCTTTATCAGACTCGCTCCATCCTCGGCCGCACCGAGAGTTGTCTTTATGTGTCCTT 239 Query 267 ACGGTTACTTAACGACTCTAACCTCCGATGGTACACTCTCTGTCGTGTTCCGGATCGAAA 326 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 240 ACGGTTACTTAACGACTCTAACCTCCGATGGTACACTCTCTGTCGAGTTCCGGATCGAAA 299 Query 327 ACTAACAAATTTCTCAGGTGGTCATTTATTGGTCCCGATCCTATCTCGCCATGCTCCTCC 386 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| Sbjct 300 ACTAACAAATTTCTCAGGTGGTCATTTATTGGTTCCGATCTTATCTCGCTATGCTCCTCC 359 Query 387 TGCTCATTGGTCGAGTGTGGTCGCTGTTGATTCTAATATCTACGCTATTGGAGGGCCTAT 446 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 360 TGCTCATTGGTCGAGTGTGGTCGCTGTTGATTATAATATCTACGCTATTGGAGGGCCTAT 419 Query 447 CAATGATGCACCATCCTCTAGCGTCTCGGTCTTGGATTGTCAGTGTGACATGTGGCACGA 506 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct 420 CAATGATGCACCATCCTCTAGCGTCTCGGTCTTGGATTGTCAGTGTGAGAAATGGCGTGA 479 Query 507 AGCTCCA-CCAATGCGGGTGGCACGAAACTACCCCACTGCGACCGTTCTTAACGGGAAGA 565 |||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 480 AGCTCCGTCCA-TGCGGGTGGCACGAAACTACCCCACTGCGACCGTTCTTGATGGGAAGA 538 Query 566 TTTATGTAGCAGGAGGCTGCGAAGAATGCATTTCATTGGATTGTATAGAAGTGTTTGATC 625 | ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||| Sbjct 539 TATATGTAGCAGGAGGCTGTGAAGATTGCACTTCATTGGATTGTATAGAAGTGTTTGATC 598 Query 626 CTAAGACTCAGACTTGGGACTCTGTGGCAAGTCCTGGCACCGAGAGATGCGAGAGACTTG 685 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 CTAAGACTCAAACTTGGGACTCTGTGGCAAGTCCTGGCACCGAGAGATGCGAGAGACTTG 658 Query 686 TGTACAAGAGCGTTGGGATCGAAGGAAAATATCACTTGTTTGGGGGTGCGGGTCATGTGG 745 | ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 659 TATACAAGAGCGTAGGGATCGAAGGAAAGTATCACTTGTTTGGCGGTGCGGGTCATGTGG 718 Query 746 CTTACGATCCGAAAGAAGGTAGATGGGACTCAGTTGGAATGGATATGGATATGGGTCGGA 805 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 719 CTTACGACCCGAAAGAAGGTAGATGGGACTCAGTTGGAATGGATATGGAGATGGGTCGGA 778 Query 806 CATGGGTTTCGTATTGTGTGATAAACAATATATTGTTCTATTATAATAATAGAAAGTTTA 865 |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 779 CATGGGTTTCATATTGTGTGATAAACAATATATTGTTCTATTATAATGATAGAGAGTTTA 838 Query 866 AATGGTATGACTATAAAGGAGGATTTTGGAGAAAGTTGATGGGGTTGGAACGGCTAATCA 925 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 839 AATGGTATGACTATAAAGGAAGATTTTGGAGAAAGTTGATGGGGTTGGAACGGCTAATCA 898 Query 926 AGTTTCTATGCTATAGCCGTGTTAACTTAGCGGCTTACGGTGATAAGATGGCGGTTTTAT 985 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 899 AGTTTCTATGCTATAGCCGTGTTAACTTGGCGGCTTACGGTGAGAAGATGGCGGTTTTAT 958 Query 986 GGGAAACTTCTGTGCCTTCTAGCTCCAAGAACAAGATGATTTGGTGTGCGGAGATTACAA 1045 |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 959 GGGATACTTTTGTGCCTTCTAGCTCTAAGAACAAGATGATTTGGTGTGCGGAGATTACGA 1018 Query 1046 TTGAAAGGCACGACATATACGAGATTTGCGGTAAGACCCAGTGGTTTGATGTTGTGCTTA 1105 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1019 TTGAAAGGCACGACATATACGAGATTTGCGGTAAGACTGAATGGTTTGATGTTGTGCTTA 1078 Query 1106 GAGTTCCCAAATCACATGAATTGGTACATGTTCTTGCTGCTACTGTTTGA 1155 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1079 GAGTTCCCAAATCATATGAATTGGTACATGTTCTTGCTGCTACTGTTTGA 1128 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57680426205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5