BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944044
Length=2038
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37950.1 | Symbols: | Rhamnogalacturonate lyase family prot... 2361 0.0
AT2G22620.1 | Symbols: | Rhamnogalacturonate lyase family prot... 675 0.0
> AT4G37950.1 | Symbols: | Rhamnogalacturonate lyase family protein
| chr4:17844430-17849274 FORWARD LENGTH=2310
Length=2310
Score = 2361 bits (1278), Expect = 0.0
Identities = 1573/1715 (92%), Gaps = 22/1715 (1%)
Strand=Plus/Plus
Query 323 TTTAGTAGGAGA-AAAATTCAATATTGTAAATCAAACAAGTGAGCATGTCGAAATTTCTT 381
|||||||||| | ||||||| |||||||||||||||||||||| || | |||||||| |
Sbjct 503 TTTAGTAGGA-ACAAAATTCGATATTGTAAATCAAACAAGTGAACAAATTGAAATTTCAT 561
Query 382 TTTCGAGAACATGGAATATCTCTCAACATACCTCGGGAGCCCCATTAAACGTAGACAAAA 441
|||||||||| | | ||||||||| ||| ||| |||||||||||||||||||
Sbjct 562 TTTCGAGAAC---G--T-TCTCTCAACGGGGCTCAGGAATCCCATTAAACGTAGACAAAC 615
Query 442 GATATATCATTCGAAGTGGTGTGTCCGGAGTCTACATGTACGCTGTGTTAGAGAGATTAA 501
||||||| |||||||| ||||| |||||| | |||||||||||||| || ||||| ||||
Sbjct 616 GATATATTATTCGAAGAGGTGTATCCGGAATATACATGTACGCTGTATTGGAGAGGTTAA 675
Query 502 AAGGTTGGCCCGACGTGAACATGGACCAAACCAGAATCGTCTTCAAGCTTAACACAACAA 561
||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 676 TAGGTTGGCCTGACGTGGACATGGACCAAATCAGAATCGTCTTCAAGCTTAACACAACAA 735
Query 562 AATTCGATTACATGGCTATATCTGATGGTCGGCAGAAAATTATGCCTTCTGCA-ACAGAT 620
||||||||| ||||||| | || ||| |||||| ||||| ||||||| || | ||||||
Sbjct 736 AATTCGATTTCATGGCTGTTTCCGATAATCGGCAAAAAATAATGCCTTTTG-ATACAGAT 794
Query 621 CGAGATA-T-CAAAACTGGTCGTGCTAGTCCATTGGCTTACAAAGAAGCTGTTCATTTGA 678
||||| | | | ||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 795 CGAGACATTACCAAA--GGTCGTGCCAGTCCATTGGCTTACAAAGAAGCTGTTCATTTGA 852
Query 679 TAAATCCCCAAAATCATATACTTAAAGGGCAGGTAGACGATAAGTACATGTACTCGATGG 738
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 853 TAAATCCACAAAATCATATGCTTAAAGGGCAGGTAGACGATAAGTACATGTACTCGGTGG 912
Query 739 AAAACAAAGACAACAAAGTACACGGTTGGATATCGGCGGACCAACGTGTTGGGTTT-TGG 797
||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||
Sbjct 913 AAAACAAAGACAACAAAGTACACGGTTGGATATCGTCGGACCAACGT-ATCGGTTTCTGG 971
Query 798 ATGATTACTCCCAGCGATGAGTTTCGTTCATGTGGGCCCATCAAACAAGATCTCACTTCT 857
||||| || |||||||| ||||| | | |||||||||| |||||||||||||||||||||
Sbjct 972 ATGATCACGCCCAGCGACGAGTTCCATGCATGTGGGCCGATCAAACAAGATCTCACTTCT 1031
Query 858 CATGTGGGACCCACCATTCTTTCAATGTTTACAAGTGTACATTACGCGGGAGTAGATATT 917
|||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1032 CATGTGGGCCCCACCACTCTTTCGATGTTTACAAGTGTACATTACGCGGGAAAAGATATG 1091
Query 918 AACACAATTTATAAAAGCAAGGAGCCATGGAGGAAGATGTTTGGCCCTGTCTTTGTTTAT 977
||||||| ||||||||||||||| || |||| |||| ||||||| |||||||||||||||
Sbjct 1092 AACACAAATTATAAAAGCAAGGAACCGTGGAAGAAGGTGTTTGGTCCTGTCTTTGTTTAT 1151
Query 978 CTCAATTCTGCCTCTTCTCGTAATCTTCTCTGGACCGATGCTAAACGACAGATGGTTTCC 1037
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 CTCAATTCTGCTTCTTCTCGTAATCTTCTCTGGACCGATGCTAAACGACAGATGGTTTCC 1211
Query 1038 GAGGTCCAAAGTTGGCCTTATGATTTCGTGAAGTCAGTAGATTACCCTCTTCATCACCAA 1097
||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1212 GAGGTCCAAAGCTGGCCTTATGATTTCGTGAAATCTGTAGATTACCCTCTTCATCACCAA 1271
Query 1098 AGAGGAATC-GTCAAGGGTCGAA-TCTTTGTCATGGAGAGATACAACAAAAGCGAAACGA 1155
||||||| | |||||||||| || | |||||||| || ||||||| ||||| || |||
Sbjct 1272 AGAGGAA-CAGTCAAGGGTC-AATTATTTGTCATAGACAGATACATCAAAAACGTGACGT 1329
Query 1156 ACTTATTTGGGAAATTTGCTTTTGTGGGATTAGCCTTACCTGGTGAAGCTGGTTCATGGC 1215
||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1330 ACTTATTCGGGCAATTTGCTTTTGTGGGATTAGCATTACCTGGTGAAGCTGGTTCTTGGC 1389
Query 1216 AAACCGAAAACAAGGGATATCAATTTTGGACACGAGCAGACAAAGTAGGG-ATGTTCACA 1274
|||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct 1390 AAACCGAAAACAAGGGATATCAATTTTGGACACGAGCAGACAAAAT-GGGAATGTTCACA 1448
Query 1275 ATAGCGAATGTTAGACCAGGGAAGTATAGTCTCTACGCATGGGTTTCTGGGTTTATCGGT 1334
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1449 ATAGCGAATGTGAGACCAGGGACGTATAGTCTCTACGCATGGGTTTCTGGATTTATCGGT 1508
Query 1335 GACTACAAATATGAGCGTGACATTACCATCACACCAGGTAGGGTGATAGACGTAGGACGC 1394
||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||| |
Sbjct 1509 GACTATAAATATGTGCGTGACATTACCATCACACCAGGTAGGGAGATAGACGTTGGACAC 1568
Query 1395 ATAGTGTACGAGCCACCGAGAAATGGTCCGACTCTGTGGGAGATCGGAGAACCAGACCGA 1454
|||||||||| |||||||||||| || || || ||||||||||||||| |||| ||||||
Sbjct 1569 ATAGTGTACGTGCCACCGAGAAACGGCCCAACACTGTGGGAGATCGGACAACCGGACCGA 1628
Query 1455 ACCGCCGCAGAATTCTATATCCCAGATCCGGACCCAACCCTTTTGACCAAACTCTATCTA 1514
||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1629 ACCGCGGCAGAATTCTATATCCCAGATCCGGACCCAACCCTTTTCACCAAACTTTATCTA 1688
Query 1515 AATTACTCAAATCCTCAAGACAGATTTAGACAATATGGTCTATGGGATCGTTACAGTGTT 1574
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1689 AATTACTCAAATCCTCAAGATAGATTTAGACAGTATGGTCTATGGGATCGTTACAGTGTT 1748
Query 1575 TTGTATCCTCGAAAAGATCTTATTTTTACTACTAGAGTAAGTGACTTTAAAAAAGACTGG 1634
|||||||||||||| |||||| |||||||| || |||| ||||||| |||||||||||||
Sbjct 1749 TTGTATCCTCGAAACGATCTTGTTTTTACTGCTGGAGTGAGTGACTATAAAAAAGACTGG 1808
Query 1635 TTCTATGCCCATGTCAACAGGAAAGCTGGAAATGGGACATATAAAGCAACAACATGGCAA 1694
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1809 TTCTATGCCCATGTCAACAGGAAAGCTGGAAATGGGACATATAAAGCAACGACATGGCAA 1868
Query 1695 ATTAAGTTTAATTTAAAAGCAGTGATTCAAACTAGAATCTACACACTTCGAATAGCTTTG 1754
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1869 ATTAAGTTTAATTTGAAAGCAGTGATTCAAACTAGAATATACACACTTCGAATAGCTTTG 1928
Query 1755 GCTGCAGCCACAACTACTGATCTAGTGGTTTGGGTCAACCAAGCTAATTCCAAACCCCTA 1814
||||||||| |||| | ||||||| |||||||||||||| ||| | |||||||||| |||
Sbjct 1929 GCTGCAGCCTCAACAATTGATCTACTGGTTTGGGTCAACGAAGTTGATTCCAAACCTCTA 1988
Query 1815 TTCATAACTGGGCTAATAGGTCGGGATAACGCGATCGCCAGGCATGGGATTCATGGGTTG 1874
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1989 TTCATAACTGGGCTAATCGGTCGGGATAACGCGATCGCGAGGCATGGGATTCATGGGTTG 2048
Query 1875 TACAAATTGTACAATATCGATGTTCATGGAAAGTTACTTAGGGTTGGTAATAATACTATT 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2049 TACAAATTGTACAATATCGATGTTCATGGAAAGTTACTTAGGGTTGGTAATAATACTATT 2108
Query 1935 TTTCTTACTCATGGTCGGAACTCTGATTCTTTTTCAGGTGTAATGTATGATTATCTTCGT 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 TTTCTTACTCATGGTCGGAACTCTGATTCTTTTTCAGGTGTAATGTATGATTATCTTCGT 2168
Query 1995 TTGGAAGGTCCTTCCGGTGTTTGATAAACTAAATA 2029
||||||||||||||||| |||||||||||||||||
Sbjct 2169 TTGGAAGGTCCTTCCGGAGTTTGATAAACTAAATA 2203
Score = 313 bits (169), Expect = 5e-84
Identities = 266/310 (86%), Gaps = 18/310 (6%)
Strand=Plus/Plus
Query 22 TGGACAAGGA-ATTGGAAAACGGATCTCCGGGAGTGAAGG-TGG--GTCGGG-TCATGAC 76
||| |||||| | ||||| ||||| |||||||| |||||| ||| | |||| || | ||
Sbjct 145 TGGCCAAGGAGA-TGGAATACGGAGCTCCGGGAATGAAGGCTGGTCGCCGGGTTC-TAAC 202
Query 77 T-CAGGTTTTCGTTCTGA-TTTTCCTTCTTCAAGGTGTTCGTTC-CACAACGTCACTAAA 133
| || |||||||||| | ||||||||||||||||||||| ||| || ||| |||| |||
Sbjct 203 TCCA-CTTTTCGTTCT-AGTTTTCCTTCTTCAAGGTGTTCATTCTCA-AACATCACGAAA 259
Query 134 CAATTTAAACGTCACAAAACCGGGACAAAAAC---AATCTCCCCCGGTTACGCTTAGGAA 190
||| || ||| || ||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct 260 CAAATTCAACATCGCAAAAGCGGGACATAAACTTGCATCTCCCCCGGTTACGCTTAAGAA 319
Query 191 AGTTGGTCATAACCAAGTGGTCGTTGATAACGGTATCATCCAAGTTAGCTTCTCGAGTCC 250
||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct 320 AGTTGGTGATAACCAAGTGGTCGTTGATAACGGTATCATCGATGTTACCTTCTCGAGTCC 379
Query 251 AGCA-GGCTTAATAACTGGAATCAAGTACAATGGCTTTAACAATGTGTTGAACGACCAAA 309
| || || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 380 A-CAAGGATTAATAACTAGAATCAAGTACAATGGCTTAAACAATGTGTTGAACGACCAAA 438
Query 310 TTGAGAATCG 319
|||| |||||
Sbjct 439 TTGAAAATCG 448
> AT2G22620.1 | Symbols: | Rhamnogalacturonate lyase family protein
| chr2:9604772-9610595 REVERSE LENGTH=2444
Length=2444
Score = 675 bits (365), Expect = 0.0
Identities = 1226/1627 (75%), Gaps = 118/1627 (7%)
Strand=Plus/Plus
Query 372 GAAATTTCTTTTTCGAGAACATGGAATATCTCTCA-ACATACCT-C-GGGAGCCCCATTA 428
|||||||| ||| | ||||| |||| ||||||| | || | || | || |||| ||
Sbjct 680 GAAATTTCATTTACAAGAACGTGGACTATCTCT-AGACGTGGCTCCTTGG-TCCCC-CTA 736
Query 429 AACGTAGACAAAAGATATATCATTCGAAGTGGTGTGTCCGGAGTCTACATGTACGCTGTG 488
|| ||||| ||||||||||| ||||||||||||||||||||| | |||||||||| | |
Sbjct 737 AATGTAGATAAAAGATATATTATTCGAAGTGGTGTGTCCGGATTATACATGTACGGTATA 796
Query 489 TTAGAGAGATTAAAAGGTTGGCCCGACGTGAACATGGACCAAACCAGAATCGTCTTCAAG 548
|| ||||| ||| ||||||||||||||||| |||||||||||| ||| || |||||||||
Sbjct 797 TTGGAGAGGTTAGAAGGTTGGCCCGACGTGGACATGGACCAAATCAGGATTGTCTTCAAG 856
Query 549 CTTAACACAACAAAATTCGATTACATGGCTATATCTGATGGTCGGCAGAAAATTATGCCT 608
|| ||| ||| |||||| |||| |||||| ||||| |||| |||||||| || |||||
Sbjct 857 CTCAACCCAAAAAAATTTGATTTCATGGCGATATCCGATGATCGGCAGAGAAGCATGCCA 916
Query 609 TCTGCA--ACAGATCGAGATATCAAAACTGGTCGTGCTAGTCCATTGGCTTACAAAGAAG 666
|| | | ||||||||| |||| | || | ||| |||| |||||||||||||
Sbjct 917 TC-G-ATGGCAGATCGAG-----AAAA-T--TC-T--AAGT-CATTAGCTTACAAAGAAG 962
Query 667 CTGTTCATTTGATAAATCCCCAA--AATCATATACTT-AAAGG-GCAGGTAGACGATAAG 722
|||||| ||||| |||| |||| || | ||| || ||||| | |||| || ||||||
Sbjct 963 CTGTTCTTTTGACAAAT--CCAAGCAACCCTAT-GTTCAAAGGAG-AGGTGGATGATAAG 1018
Query 723 TACATGTACTCGATGGAAAACAAAGACAACAAAGTACACGGTTGGATATCGGCGGACCAA 782
|| |||||||| |||||| ||||||||||||| || || |||||||| || | |||| |
Sbjct 1019 TATATGTACTCAATGGAAGACAAAGACAACAATGTGCATGGTTGGATCTCATCAGACCCA 1078
Query 783 CGTGTTGGGTTTTGGATGATTACTCCCAGCGATGAGTTTCGTTCAT-GTGGGCCCATCAA 841
| |||||||||||||||||| ||||| ||||||||||| || || | |||| ||||||||
Sbjct 1079 CCTGTTGGGTTTTGGATGATAACTCCGAGCGATGAGTTCCG-TCTTGGTGGCCCCATCAA 1137
Query 842 ACAAGATCTCACTTCTCATGTGGGACCCACCATTCTTTCAATGTTTACAAGTGTACATTA 901
||||| ||||| ||||||| ||||||| || || || |||||||| || |||||
Sbjct 1138 GCAAGACCTCACCTCTCATGCCGGACCCATCACACTCTCCATGTTTACGAGCACGCATTA 1197
Query 902 CGCGGGAGTAGATATTA-ACA-CAATTTATA-AAA-GCAAGGAGCCATGG-AGGAAGATG 956
|||||| ||| || | | | | ||||| ||| | | ||||||||| || ||| |
Sbjct 1198 TGCGGGAAAAGAGATGAGA-ATGGA-TTATAGAAATG-GA-GAGCCATGGAAGAAAG-TT 1252
Query 957 TTTGGCCCTGTCTTTGTTTATCTCAATTCTG-C-CT--C-----TTCT-CGTAATCTTCT 1006
||||| |||||||| | ||||||||| |||| | || | |||| | | || |||
Sbjct 1253 TTTGGTCCTGTCTTGGCTTATCTCAACTCTGTCTCTCCCAAAGATTCTAC-TCTTCGTCT 1311
Query 1007 CTGGACCGATGCTAAACGACAGATGGTTTCCGAGGTCCAAAGTTGGCCTTATGATTTCGT 1066
||||| ||||||||||||||||||| | | || ||| |||| |||||||||||||| |
Sbjct 1312 CTGGAGAGATGCTAAACGACAGATGGCTGCAGAAGTCAAAAGCTGGCCTTATGATTTTAT 1371
Query 1067 GAA-GTCAGTAGATTACCCTCTTCATCACCAAAGAGGAA-TCGTC-AAGGGTCGAA-TCT 1122
|| |||| |||||| ||||||| || |||||||||| || || || |||| || |||
Sbjct 1372 -AACTTCAGAAGATTATCCTCTTCGCCATCAAAGAGGAACTC-TCGAA-GGTC-AATTCT 1427
Query 1123 TTGTCATGGAGAGATAC--AACAAAAGCGAAACGAACTTATTTGGGAAATTTGCTTTTGT 1180
| ||| || || ||| | || | ||| | | ||| ||| ||||||||||||||
Sbjct 1428 TAATCAAAGACAGTTACGTGTC-AAGGTTAAA-G-A--TATATGGAAAATTTGCTTTTGT 1482
Query 1181 GGGATTAGCCTTACCTGGTGAAGCTGGTTCATGGCAAACCGAAAACAA-GGGATATCAAT 1239
|| || ||| | |||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct 1483 TGGTTTGGCCCCAATTGGTGAAGCTGGTTCATGGCAAACCGAAT-CAAAGGGTTATCAAT 1541
Query 1240 TTTGGAC-ACGAGCAGACAA-AGTAGGGATG-TTCACAATAGCGAATGTTAGACCAGGGA 1296
||||||| | ||| |||| || ||||| | |||| ||||| |||||| || |||| |
Sbjct 1542 TTTGGACGAA-AGCTGACAGGAG-AGGGA-GATTCATAATAGAGAATGTGAGGGCAGGCA 1598
Query 1297 AGTATAGTCTCTACGCATGGGTTTCTGGGTTTATCGGTGACTACAAATATGAGCGTGACA 1356
| ||||||||||||||||||| ||||| ||||| || ||||| || ||||||| |||
Sbjct 1599 ATTATAGTCTCTACGCATGGGGGTCTGGTTTTATTGGAGACTATAAGTATGAGCAAAACA 1658
Query 1357 TTACCATCACACCAGGTAGGGTGATAGAC-GTAGGACGCAT-AGTGTACGAGCCACCGAG 1414
|||||||||| |||||||| | ||| || ||||| | | | |||||| || || |||||
Sbjct 1659 TTACCATCACGCCAGGTAGCGAGAT-GAATGTAGGGC-CTTTAGTGTATGAACCGCCGAG 1716
Query 1415 AAATGGTCCGAC-TCTGTGGGAGATCGGAGAACCAGACCGAACCGCCGCAGAATTCTATA 1473
||| ||||| || | ||||||| ||||| | ||| || |||||||| | ||||||||||
Sbjct 1717 AAACGGTCCAACAT-TGTGGGAAATCGGTGTACCGGATCGAACCGCAGGTGAATTCTATA 1775
Query 1474 TCCCAGATCCGGACCCAACCCTTTTGACCAAACTCTATCTAAATTACTCAAATCCTCAAG 1533
| || ||||| |||| || || ||| || || ||| | || | || ||| |||
Sbjct 1776 TACCGGATCCTTACCCTACACTGATGAATAAGCTTTATGTCAAC--C-CAC-TCC--AAG 1829
Query 1534 ACAGATTTAGACAATATGG-TCTATGGGATCGTTACAGT-GTTTTGTATCCTCGAAAA-G 1590
|||||||||| |||||||| | |||||||||||||| | | ||| || |||| |||| |
Sbjct 1830 ACAGATTTAGGCAATATGGAT-TATGGGATCGTTAC-GCAGATTTATACCCTC-AAAACG 1886
Query 1591 ATCTTATTTTTACTACTAGA-GTAAGTGACTT-TAAAAAAGACTGGTTCTATGCCCATGT 1648
||||| | | || | | | |||||||| || || || || ||||||| ||| |||||
Sbjct 1887 ATCTTGTCTACACAA-TCGGTGTAAGTGA-TTATAGAAGTGATTGGTTCTTTGCACATGT 1944
Query 1649 CAAC-AGGAAA-GCTGGAAATGGGACATATAAAGCAACAACATGGCAAATTA-AGTTTAA 1705
| || ||| | ||| || | ||||| || |||||||||||||||| | | || ||
Sbjct 1945 GG-CGAG-AAACGTTGGTAACGATACATACCAACCAACAACATGGCAAATCATA-TTCAA 2001
Query 1706 TTTAAAAG-CAGTGATTCAAACTAGAAT-CTACACACTTCGAATAGCTTTGGC-TGCAGC 1762
||||| | |||| | | | | | ||||||||| ||||||||| | || | ||||
Sbjct 2002 CCTAAAAAAC-GTGAACCGTA-TCGGACGCTACACACTCCGAATAGCTCTAGCAT-CAGC 2058
Query 1763 CA-CA-ACTACTGATCTAGTGGTTTGGGTCAACCAAGCTAATTCCAAACCCCTATTCATA 1820
| | | | | || ||| | | ||||| | | || ||| | | | |||| |
Sbjct 2059 -AGCTGATT-CGGAACTACAAATCCGAATCAACGATCCGAAATCCGATGCGATTTTCACA 2116
Query 1821 ACTGGGCTAATAGGTCGGGATAACGCGATCGCCAGGCATGGGATTCATGGGTTGTACAAA 1880
|| || | || || ||| || |||||||| || ||||| |||||||| || || | |
Sbjct 2117 ACCGGTTTTATCGGAAAGGACAATGCGATCGCAAGACATGGAATTCATGGATTATATAGA 2176
Query 1881 TTGTACAATATCGATGTT-CATGGAAAGTTACTTAGGGTTGGTAATAATACTATTTTTCT 1939
||||| | |||||| ||| | |||||| ||||| || |||||| ||||||| || ||| |
Sbjct 2177 TTGTATAGTATCGACGTTGC-TGGAAATTTACTAAGTGTTGGTGATAATACAATATTT-T 2234
Query 1940 TA-CTCA 1945
|| ||||
Sbjct 2235 TAACTCA 2241
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101003496540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5