BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944134
Length=2342
Score E
Sequences producing significant alignments: (Bits) Value
AT4G37250.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3727 0.0
AT2G23300.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1229 0.0
AT5G67280.1 | Symbols: RLK | receptor-like kinase | chr5:268422... 252 1e-65
> AT4G37250.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr4:17527650-17530506 REVERSE LENGTH=2761
Length=2761
Score = 3727 bits (2018), Expect = 0.0
Identities = 2240/2347 (95%), Gaps = 16/2347 (1%)
Strand=Plus/Plus
Query 6 TAGTGTGATGAAGCCATGAAAATGGAGTTGATTTCAGTGGTTTTCTTCTTCTTCTTTTGC 65
||||||||||| || |||| |||||||||||||||||| | || |||||||||||||||
Sbjct 301 TAGTGTGATGATGCAATGAGAATGGAGTTGATTTCAGT-G-ATT-TTCTTCTTCTTTTGC 357
Query 66 TCTGTTTTGAGTTCCTCTGGTTTAAACTCTGATGGATTGGTTTTGATGAAGTTCAAATCC 125
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||
Sbjct 358 TCTGTTTTGAGTTCCTCTGCTTTAAACTCTGATGGGTTGGTTTTGATGAAGTTTAAATCC 417
Query 126 TCTGTTCTTGTTGATCCTCTGTCTTTATTACAGACATGGAACTACAAACACGAAACTCCA 185
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 418 TCTGTTCTTGTTGATCCTCTGTCTTTATTACAGACATGGAATTACAAACACGAAAGTCCA 477
Query 186 TGTTATTGGAGAGGAATCTCTTGTAATAACGATTCTAAAGTCTTAACCTTGTCTCTTCCC 245
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 478 TGTTCTTGGAGAGGAATCTCTTGTAATAACGATTCTAAAGTCTTAACTTTGTCTCTTCCC 537
Query 246 AATTCTCAACTTCTTGGTTCGATTCCTTCTGATTTGGGTTCTCTCTTAACACTTAAAAGT 305
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 538 AATTCTCAGCTTCTTGGTTCGATTCCTTCTGATTTGGGTTCTCTCTTAACACTTCAAAGT 597
Query 306 CTCGATCTTTCCAACAATTCCTTCAATGGGCCATTACCGGTTTCTTTCTTCAACGCTAGA 365
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CTCGATCTTTCCAATAATTCCTTCAATGGGCCATTACCGGTTTCTTTCTTCAACGCTAGA 657
Query 366 GAGCTTCGTTTCCTCGATCTCTCTAGTAACATGATCTCCGGCGAAATCCCTTCCGCAATT 425
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GAGCTTCGTTTCCTTGATCTCTCTAGTAACATGATCTCCGGCGAAATCCCTTCCGCAATT 717
Query 426 GGTGATCTTCACAATCTTCTAACCCTAAATCTCTCTGATAATGCCTTGGCGGGAAAGTTA 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGTGATCTTCACAATCTTCTAACCCTAAATCTCTCTGATAATGCCTTGGCGGGAAAGTTA 777
Query 486 CCTGCAAATTTGGCGTCATTGAGAAACCTAACGGTGGTTTCTTTGGAGAATAATTACTTT 545
||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 778 CCTACAAATTTGGCGTCGTTGAGAAACTTAACGGTGGTTTCTTTGGAGAATAATTACTTT 837
Query 546 TCCGGCGAAATTCCCGGCGGTTGGAGAGTTGTTGAGTTCTTAGACCTATCGTCGAATCTG 605
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 838 TCCGGCGAGATTCCCGGCGGTTGGAGAGTTGTTGAGTTCTTAGACCTGTCGTCGAATCTG 897
Query 606 ATCAATGGCTCGCTACCACCTGATTTTGGCGGAGATAGTCTCCGGTACTTGAACGTCTCG 665
|||||||||||||| || || |||||||||||| ||||||||| |||||| || ||||||
Sbjct 898 ATCAATGGCTCGCTTCCTCCGGATTTTGGCGGATATAGTCTCCAGTACTTAAATGTCTCG 957
Query 666 TTTAATCAAATCTCCGGCGAAATTCCACCGGAGATTGGAGTCAATTTCCCCAGAAACGTC 725
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 958 TTTAACCAAATCTCCGGCGAAATTCCACCGGAGATCGGAGTCAATTTCCCAAGAAACGTC 1017
Query 726 ACCGTTGATCTCTCCTTCAACAATTTAACCGGTCCAATACCAGATTCTCCGGTTTTCTTT 785
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1018 ACCGTTGATCTCTCCTTCAACAATTTAACCGGTCCAATCCCTGATTCTCCGGTTTTCTTA 1077
Query 786 AACCAGGAATCGAATTTCTTTTCAGGAAACCCGGGTCTATGCGGTGAACCAACCCGTAAC 845
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1078 AACCAGGAATCAAATTTCTTTTCAGGAAACCCGGGTCTATGCGGTGAACCGACCCGAAAC 1137
Query 846 CCGTGTCTTATCCCTTCCTCGCCGTCAATCGCCTCC-AACGCCGACGTGCCGACGTCTAC 904
|||||||||||||||||||||||||| |||| |||| || |||||||| |||||||||||
Sbjct 1138 CCGTGTCTTATCCCTTCCTCGCCGTCTATCGTCTCCGAA-GCCGACGTACCGACGTCTAC 1196
Query 905 ACCAGCAATCGCCGCCATACCGAACACAATCGGTTCAAACCCGGTTACCGATCCAAAATC 964
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1197 ACCAGCAATCGCCGCAATACCGAACACAATCGGTTCAAACCCGGTTACCGATCCAAATTC 1256
Query 965 ACAACAAACCGACCCAAATGCCCGAACCGGGTTACGACCCGGAGTTATAATCGGAATCGT 1024
||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct 1257 ACAACAAACCGACCCAAATCCCCGAACCGGGTTACGACCCGGAGTTATAATAGGGATCGT 1316
Query 1025 AGTCGGAGATATCGCCGGAATCGGAATCCTCGCCGTAATTTTCCTCTACATCTACAGATG 1084
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1317 AGTCGGAGATATCGCTGGAATCGGAATCCTCGCCGTGATTTTCCTCTACATCTACAGATG 1376
Query 1085 CAAGAAGAACAAGATTGTGGAT---AATAACAACGACAAGCAAAGAACAGAAACGGACAC 1141
||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||
Sbjct 1377 CAAGAAGAACAAGATAGTGGATAACAACAACAACGACAAGCAAAGAACAGAAACAGACAC 1436
Query 1142 AATTACGCTATCACCATTTACTTCTTCTTCTTCTTCACCAGAAGAATCAAGAAGATTCAA 1201
||||||| ||||| ||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct 1437 AATTACGTTATCAACATTTTCATCTTCTTCTTCTTCACCAGAAGAGTCAAGAAGATTCAG 1496
Query 1202 GAAATGGTCGTGTCTACGAAAAGATCCTGAAACGACGCCGTCT---GAAGAAGAT--A-A 1255
|||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |
Sbjct 1497 GAAATGGTCGTGTCTACGAAAAGATCCTGAAACGACACCGTCTGAAGAAGAAGATGAAGA 1556
Query 1256 TGATGAAGACGAAGAAAGCGGTTACAATGCAAATCAACGGTCAGGAGATAACAAGTTAGT 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1557 TGATGAAGACGAAGAAAGCGGTTACAATGCAAATCAACGGTCAGGAGATAACAAGTTAGT 1616
Query 1316 GACCGTTGATGGAGAGAAAGAGATGGAGATTGAGACTCTGCTTAAGGCTTCAGCTTATAT 1375
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 GACCGTTGATGGAGAGAAGGAGATGGAGATTGAGACTCTGCTTAAGGCTTCAGCTTATAT 1676
Query 1376 TTTAGGAGCCACTGGTTCGAGTATAATGTATAAAGCCGTTCTTGAAGACGGAAGGGTTTT 1435
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1677 TTTAGGAGCCACAGGTTCGAGTATAATGTATAAAGCCGTTCTTGAAGACGGTAGGGTTTT 1736
Query 1436 CGCGGTTCGTCGGCTCGGTGAGAACGGTTTGA-ATCAGCGCCGGTTTAAGGATTTTGAGT 1494
|||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||
Sbjct 1737 CGCGGTTCGTCGACTCGGTGAAAACGGTTT-ATCTCAGCGCCGGTTTAAGGATTTTGAGC 1795
Query 1495 CGCACATTCGAGCCATTGGCAAATTGGTTCACCCGAATTTGGTTAGACTTTGTGGGTTCT 1554
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CGCACATTCGAGCCATTGGGAAATTGGTTCACCCGAATTTGGTTAGACTTTGTGGGTTCT 1855
Query 1555 ATTGGGGTACCGACGAGAAATTGGTCATTTACGATTTTGTCCCTAACGGCAGCCTCGTCA 1614
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1856 ATTGGGGTACCGACGAGAAACTAGTCATTTACGATTTTGTCCCTAACGGCAGCCTCGTCA 1915
Query 1615 ACCCCCGTTACCGAAAAGGAGGAGGGTCTTCTTCACCGTATCACCTACCATGGGAAACTC 1674
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1916 ACCCCCGTTACCGAAAAGGAGGAGGGTCTTCTTCACCGTATCACCTACCGTGGGAAACTC 1975
Query 1675 GGCTCAAGATAGCAAAGGGCATTGCACGTGGGCTGGCTTATCTCCACGAGAAGAAGCATG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 GGCTCAAGATAGCAAAGGGCATTGCACGTGGGCTGGCTTATCTCCACGAGAAGAAGCATG 2035
Query 1735 TGCATGGAAACTTGAAGCCTAGTAACATACTTTTGGGCCATGACATGGAGCCCAAAATAG 1794
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2036 TGCATGGAAACTTGAAGCCTAGCAACATACTTTTGGGCCATGACATGGAACCCAAAATAG 2095
Query 1795 GCGATTTCGGACTCGAGAGGCTTCTCACAGGCGAAACGAGCTACATCCGAGCTGGTGGAT 1854
|||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 2096 GCGATTTCGGACTCGAAAGGCTTCTTACAGGCGAAACAAGCTACATTCGAGCTGGTGGAT 2155
Query 1855 CTTCTCGGATTTTTAGTAGTAAGCGTTACACAACTTCATCGCGAGAATTCTCGTCTATGG 1914
||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2156 CTTCTAGGATTTTCAGTAGTAAGCGTTACACAACTTCCTCGCGAGAATTCTCGTCTATCG 2215
Query 1915 GGCCTACACCAAGCCCGAGTCCGAGCTCGGTGGGGCCGATGTCACCCTACTGCGCACCAG 1974
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2216 GGCCTACACCAAGCCCGAGTCCGAGCTCGGTGGGGGCGATGTCACCCTACTGCGCACCAG 2275
Query 1975 AGTCTTTCCGGAGCCTAAAACCGAGTCCGAAATGGGACGTTTACGGCTTTGGCGTGATCC 2034
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2276 AGTCTTTCCGAAGCCTAAAACCGAGTCCGAAATGGGACGTTTACGGCTTTGGAGTGATCC 2335
Query 2035 TTCTCGAGCTTCTCACGGGAAAGATTGTGTCTGTTGAAGAGATTGTGCTAGGAAATGGAC 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2336 TTCTCGAGCTTCTCACGGGAAAGATTGTGTCTGTTGAAGAGATTGTGCTAGGAAACGGAC 2395
Query 2095 TGACGGTTGAGGACAGGCACCGCGCAGTGAGAATGGTTGATGCGACTATCCGCGGCGAGT 2154
| |||||||||||| ||||||||||||||||||||| ||||| | | |||||||||||||
Sbjct 2396 TTACGGTTGAGGACGGGCACCGCGCAGTGAGAATGGCTGATGTGGCGATCCGCGGCGAGT 2455
Query 2155 TAGATGGCAAACAAGAGTTTTTACTCGAATGTTTCAAGTTAGGGTATAGCTGTGCATCTC 2214
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 2456 TAGATGGCAAACAAGAGTTTTTACTCGATTGTTTCAAGTTAGGCTATAGCTGTGCGTCTC 2515
Query 2215 CTGTGCCTCAAAAGAGGCCAACGATGAAAGAATCTTTGGCTGTTCTTGAAAGATTCCATC 2274
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516 CTGTTCCTCAAAAGAGGCCAACGATGAAAGAATCTTTGGCTGTTCTTGAAAGATTCCATC 2575
Query 2275 CTAACTCCTCTGTTATTAAGTCTTCATCGTTCCATTACGGACATTAATATCAGTTTGATA 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2576 CTAACTCCTCTGTTATTAAGTCTTCATCGTTCCATTACGGACATTAATATCAGTTTGATA 2635
Query 2335 CAACTAG 2341
|||||||
Sbjct 2636 CAACTAG 2642
> AT2G23300.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:9914608-9917130 FORWARD LENGTH=2322
Length=2322
Score = 1229 bits (665), Expect = 0.0
Identities = 1825/2359 (77%), Gaps = 184/2359 (8%)
Strand=Plus/Plus
Query 48 TTCTTCTTCTTCTTTTGCTCTGTTT-TGAGT-TCCTCTGGTTTAAACTCTGATGGA-TTG 104
||||||||||||| || |||||||| | | ||||||| |||||||||||||||| ||
Sbjct 52 TTCTTCTTCTTCTCTT-CTCTGTTTCT-TCTCTCCTCTGCTTTAAACTCTGATGGAGTT- 108
Query 105 GTTTTGA-TGAAG-TTCAAATCCTCTGTTCTTGTTGATCCTCTGTCTTTATTACAGA-CA 161
| || | || || ||||||| |||||||||| |||||||||| ||||||||||| | ||
Sbjct 109 CTCTT-ACTG-AGTTTCAAATACTCTGTTCTTCTTGATCCTCTCTCTTTATTACA-ATCA 165
Query 162 TGGAACTACAAACACGA-AACTCCATGTT-ATTGGAGAGGAATCTCT-TGTAATAACGAT 218
||||||||| | ||||| || ||| |||| | ||| |||| | | | ||||||||||||
Sbjct 166 TGGAACTACGACCACGACAA-TCCTTGTTCA-TGGCGAGGTGTGT-TGTGTAATAACGAT 222
Query 219 TCTAA-AG-TCTTAACCTTGTCTCTTCCC-AATTCTCAACTTC-TTGGTTCGATTCCTTC 274
|| || || | || || || |||| |||| || ||| ||| || ||||||||||||||||
Sbjct 223 TC-AAGAGTTGTT-ACTTTATCTC-TCCCAAACTCT-AACCTCGTTGGTTCGATTCCTTC 278
Query 275 TGATTTGGG-TT-CTCTCTTAACACTTAAAAGTCTCGATCTTTCCAACAATTC-CTTCAA 331
||| |||| || ||| | ||| || ||||||| |||||||||| ||||| | ||||
Sbjct 279 CGATCTGGGTTTCCTC-CAAAAC-CTCCAAAGTCTTAATCTTTCCAATAATTCAC-TCAA 335
Query 332 TGGGCCATTACCGGTT-TCTTTCTTCAACG-CTAGAGAGCTTC-GTTTCCTCGATCTCTC 388
|||| ||||||||||| ||| ||| || | | | |||| | |||| || ||| | ||
Sbjct 336 TGGGTCATTACCGGTTGAGTTT-TTCGCCGCCGATA-AGCTCCGGTTT-CTTGATTTATC 392
Query 389 TAGTAACATGATCTCCGGCGAAATCCCT-TCCGCAATTGGTGATCTT-CACAATCTTCTA 446
| |||| ||||||||||||| |||||| | |||| || | | || ||||| | || |
Sbjct 393 AAATAACTTGATCTCCGGCGAGATCCCTGT-ATCAATCGGAGGT-TTACACAA-CCTCCA 449
Query 447 -ACCCTAAATCTCTCTGATAATGCCTT-GGCGGGAAAGTTACCTGCAAATTTGGCGTC-A 503
|| |||||||||| ||||| ||| ||||||| |||| || || || |||||
Sbjct 450 GACGTTAAATCTCTCCGATAACATCTTCACCGGGAAA-CTACCAGCTAACTTAGCGTCTC 508
Query 504 TTGAGAAACCTAACGGTGGTTTCTTTGGAGAATAATTACTTTTCCGGCGAAATT-CC--C 560
||| ||| | |||||| ||||||| || |||| || ||||| |||||||| || || |
Sbjct 509 TTG-GAAGCTTAACGGAGGTTTCTCTGAAGAACAACTACTTCTCCGGCGAGTTTCCCGGC 567
Query 561 GGCGGTTGGAGAGT-TGTTGAGT-TCTTAGACCTATCGTCGAATCTGATCAATGGCTCGC 618
||||| |||||| | ||| ||| || ||||| | || || ||||| ||||| || || |
Sbjct 568 GGCGGATGGAGA-TCGGTTCAGTATC-TAGACATTTCTTCAAATCTAATCAACGGTTCAC 625
Query 619 TACCACCTGATTT-TGGCGGAGATAGTCTCCGGTACTTGAACGTCTCGTTTAATCAAATC 677
| ||||||||||| | ||| || | |||||| ||| |||| ||||||| ||| ||||||
Sbjct 626 TCCCACCTGATTTCT-CCGGCGACAATCTCCGATACCTGAATGTCTCGTATAACCAAATC 684
Query 678 TCCGGCGAAATTCCACCGGA-GATTGGAGTC-AATTTCCCCAGAAACGTCACCGTTGATC 735
||||| || ||||| ||| | | |||| | | ||||| || ||||| ||||||||||
Sbjct 685 TCCGGAGAGATTCCTCCGAATG-TTGGTGCCGGTTTTCCTCA-AAACGCCACCGTTGATT 742
Query 736 TCTCCTTCAACAATTTAACCGGTCCAATACCAGATTCTCCGGTTTTCTTTAACCAGGAAT 795
||||||||||||||||||||||| |||| |||||||||||||||| | |||||||| |||
Sbjct 743 TCTCCTTCAACAATTTAACCGGTTCAATCCCAGATTCTCCGGTTTACCTTAACCAGAAAT 802
Query 796 CGAATTTC-TTTTCAGGAAACCCGGGTCTATGCGGTGAACCAACCCGTAACCCGTGTCTT 854
| |||||| ||||| |||||||||||| ||||||| | || ||||| ||||||||||
Sbjct 803 C-AATTTCGTTTTCCGGAAACCCGGGTTTATGCGGAGGTCCGACCCGAAACCCGTGTCCC 861
Query 855 ATCCCTTCCTCGCCGTCAATCGCCTCCAACGCCGACGTGCCGACGTCTACACCAGCAATC 914
|| ||||| || ||| | | | | | | |||| | || || |||||||| ||| ||
Sbjct 862 ATTCCTTCATCTCCGGCCA-C-CGT-C-TCGCC-A----CCAACCTCTACACCTGCACTC 912
Query 915 GCCGCCATACCGAACA-CAATCGGTTCAAACCCG-GTTACCGATCCAAAATCACAACAAA 972
|| || ||||| || | ||||||| || || || | ||||| || | ||||| |
Sbjct 913 GCAGCTATACCTAA-ATCAATCGGGTCTAA-TCGAGAAACCGAACC--GA--ACAAC--A 964
Query 973 CCGACCCAAATGCC-CGAACCGGGTTACGACCCGGAGTTATAATCGGAATCGTAGTCGGA 1031
|| ||||| || |||||||||||| |||| |||||||||||||||||| ||||||||
Sbjct 965 ---ACTCAAAT-CCTCGAACCGGGTTAAGACCAGGAGTTATAATCGGAATCATAGTCGGA 1020
Query 1032 GATATCGCCGGAATCGGAATCCTCGC-CGTAATTTTCCTCTACATCTACAGATGCAAGAA 1090
|||||||||||||||||||||||||| | | || ||| ||||| | || | || ||| ||
Sbjct 1021 GATATCGCCGGAATCGGAATCCTCGCTC-TTATCTTCTTCTACGTTTATAAATACAAAAA 1079
Query 1091 GAACAAGATTGTGGATAATAACAACGA-CA-AG-C-A-AAGAACA-GAA---ACGGACAC 1141
||||||| ||||| || || ||| | || || | | ||| || ||| | |||||
Sbjct 1080 CAACAAGACAGTGGAGAAGAAGAACAATCATAGCCTAGAAGCTCATGAAGCTAAAGACAC 1139
Query 1142 AA-TTACGCTATCACCAT--T--T-----ACTTCTTCTTCTTCTTCACCAGAAGAATCAA 1191
|| || || ||||||||| | | ||| | |||||||| || |||||| ||||||
Sbjct 1140 AACTT-CGTTATCACCATCATCATCAACAACTACATCTTCTTCATCTCCAGAACAATCAA 1198
Query 1192 GAAGA-TT-CAAGAAATGGTCGTGTCTACGAAAAG-ATCCTGAAA-CGACGCCGTCTGAA 1247
| ||| || | | |||||||| ||||| || ||| ||| |||| ||| | | |||
Sbjct 1199 GCAGATTTGC-A-AAATGGTCATGTCTCCG-TAAGAATCAAGAAACCGATG-AAACCGAA 1254
Query 1248 GAAGATAATGATGAAGACGAAGAAAGCGGTTACAATGCAAATCAACGGTCAGGAG-ATAA 1306
|||| || || ||||| || || ||| | | | | | | | || | ||| ||||
Sbjct 1255 GAAG--AA-GACGAAGA-AAATCAA-CGG-T-C-A-GGAGA-GATTGG--A-GAGAATAA 1301
Query 1307 -CAA--G---TTAGTGACCGTTGAT---GGAGAGAAAGAG-ATGGAGATTGAGACTCTGC 1356
|| | ||||| ||| ||||| |||||||||||| || || |||| ||| |||
Sbjct 1302 GAAAGGGACTTTAGTAACCATTGATGGAGGAGAGAAAGAGCTTGAAG-TTGAAACTTTGC 1360
Query 1357 TTAAGGCTTCAGCTTATATTTTAGGAGCCACTGGTTCGAGTATAATGTATAAAGCC-GTT 1415
|||||||||| ||||| |||||||||||||||||||||||||||||||| || | | |||
Sbjct 1361 TTAAGGCTTCTGCTTACATTTTAGGAGCCACTGGTTCGAGTATAATGTACAA-GACTGTT 1419
Query 1416 CTTGAAGACGGAAGGGTTTTCGCGGTTCGTCGGCTCGGTGAGAACGGTTTGAATCAGC-- 1473
||||| ||||| | |||| |||||||||||||| | |||||||| ||||||| ||| |
Sbjct 1420 CTTGAGGACGGTACGGTTCTCGCGGTTCGTCGGTTAGGTGAGAATGGTTTGAGTCAACAA 1479
Query 1474 -GCCGGTTTAAGGATTTTGAGTCGCACATTCGAGCCATTGGCAAATTGGTTCACCCGAAT 1532
|||||||||| || |||||| | || |||||||| ||||| ||||||||||||||||||
Sbjct 1480 CGCCGGTTTAAAGACTTTGAGGCACATATTCGAGCTATTGGTAAATTGGTTCACCCGAAT 1539
Query 1533 TTGGTTA-GACTTTGTGGGTTCTATTGGGGTACCGACGAGAAATTGGTCATTTACGATTT 1591
||||| | | ||| |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1540 TTGGT-ACGTCTTCGTGGATTCTATTGGGGCACCGACGAGAAATTGGTCATTTACGATTT 1598
Query 1592 TGTCCCTAACGGCAGCCTCGTCAACCCCCGTTACCGAAAAGGAGGAGGGTCTTCTTCACC 1651
||| ||||||||||| ||||||||| |||||||| | |||||||| | ||||| | |
Sbjct 1599 TGTTCCTAACGGCAGTCTCGTCAACGCCCGTTACAGGAAAGGAGG-G--TCTTCG-C-C- 1652
Query 1652 GTATCACCTACCATGGGAAACTCGGCTCAAGATAGCAAAGGGCATTG-CACGTGGGCTGG 1710
|| || |||| ||||| |||||||||||||||| ||| || ||| | |||||||| |
Sbjct 1653 GTGCCATTTACCGTGGGAGACTCGGCTCAAGATAGTAAAAGGT-TTGGCTCGTGGGCTTG 1711
Query 1711 CTTATCTCCACGAGAAGAAGCATGTGCATGGAAACTTGAAGCCTAGTAACATACTTTTGG 1770
|||| |||||||| ||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct 1712 CTTACCTCCACGACAAGAAACATGTGCACGGTAACTTGAAGCCTAGTAACATACTCTTGG 1771
Query 1771 GCCATGACATGGAGCCCAAAATAGGCGATTTCGGACTCGAGAGGCTTCTCACAGGCGAAA 1830
|||| || ||||||||||| || || |||||||| ||||| ||||||||| | || || |
Sbjct 1772 GCCAAGATATGGAGCCCAAGATCGGAGATTTCGGGCTCGAAAGGCTTCTCGCCGGGGATA 1831
Query 1831 CGAGCTACATCCGAGCTGGTGGATCTTCTCGGATTTTTAGTAGTAAGCG-TTACACAACT 1889
| ||||| | ||||||| ||||||| ||||||||||| ||||| ||||| || ||| |
Sbjct 1832 CTAGCTATAACCGAGCTAGTGGATCATCTCGGATTTTCAGTAGCAAGCGATTG-ACAGCA 1890
Query 1890 TCATCGCGAGAATTCTCGT-CTATGGGGCCTACACCAAGCCCGAGTCCGAGCTCGGTGGG 1948
|| ||||| ||||| | || | || ||||| ||||| ||||| ||||| ||||| || ||
Sbjct 1891 TCCTCGCGTGAATT-TGGTACCATCGGGCCCACACCGAGCCCAAGTCCAAGCTCCGTTGG 1949
Query 1949 GCCGATGTCACCCTACTGCGCACCAGAGTCTTTCCGGAGCCTAAAACCGAGTCCGAAATG 2008
||| || || ||||| |||||||| ||||| |||| | || ||||| | ||||||||
Sbjct 1950 GCCCATATCTCCCTATTGCGCACCCGAGTCGCTCCGCAATCTCAAACCAAACCCGAAATG 2009
Query 2009 GGACGT-TTACGGCTTTGGCGTGATCCTTCTCGAGCTTCTCACGGGAAAGATTGTGTCTG 2067
||| || || || ||||| |||||||| |||||||| ||||||||||| || ||||| |
Sbjct 2010 GGATGTGTTTGGG-TTTGGAGTGATCCTCCTCGAGCTGCTCACGGGAAAAATAGTGTC-G 2067
Query 2068 TT-GAAGAGATTGTGCTAGGAAATGGACTGACGGTTGAGGACAGGCACCGCGCAG-TGAG 2125
| || ||| | | | |||||||||| ||||| || |||||| || |||| || | | |
Sbjct 2068 ATAGACGAGGTGGGGGTAGGAAATGGGCTGACCGTAGAGGACGGGAACCGGGC-GCTAAT 2126
Query 2126 AATGGTTGATGC-GACTATCCGCGGCGAGTTAGATGGCAAACAAGAGTTTTTACTCGAA- 2183
||||| ||||| | | |||||| ||| || || |||||| | || |||||||| |
Sbjct 2127 AATGGCTGATGTAG-CGATCCGCTCCGAATTGGAAGGCAAAGAGGACTTTTTACTTGGCC 2185
Query 2184 TGTTTCAAGTTAGGG-TATAGCTGTGCATCTCCTGTGCCTCAAAAGAGGCCAACGATGAA 2242
| |||||| || ||| ||||| |||||||||| | || |||||||| || || |||||
Sbjct 2186 T-TTTCAAATT-GGGATATAGTTGTGCATCTCAAATTCCACAAAAGAGACCGACCATGAA 2243
Query 2243 AGAATCTTTGGCT-GT-TCTTGAAAGAT-TCC-ATCCTAACTCCTCTGTTATTAAGTCTT 2298
||| | || | | || | ||||||||| ||| || || ||| || | || | |||
Sbjct 2244 AGAGGCGTTAG-TAGTGT-TTGAAAGATATCCTAT--TAGCTCATCGGCTAAGA-GTC-- 2296
Query 2299 CATCGTTCCATTACGGACA 2317
|||||| ||||||||||||
Sbjct 2297 CATCGTACCATTACGGACA 2315
> AT5G67280.1 | Symbols: RLK | receptor-like kinase | chr5:26842270-26845190
REVERSE LENGTH=2480
Length=2480
Score = 252 bits (136), Expect = 1e-65
Identities = 385/501 (77%), Gaps = 34/501 (7%)
Strand=Plus/Plus
Query 1328 AGAGAAAGAGATGGAGATTGAGACTCTGCTTAAGGCTTCAGCTTATATTTTAGGAGCCAC 1387
|||||||||| | || || || || || || || || |||||||||||||| ||||||||
Sbjct 1387 AGAGAAAGAGCTTGAAATCGAAACGCTTCTCAAAGCATCAGCTTATATTTTGGGAGCCAC 1446
Query 1388 TGGTTCGAGTATAATGTATAAAGCCGTTCTTGAAGACGGAAGGGTTTTCGCGGTTCGTCG 1447
|||||||| |||||||||||||| || ||| ||||||||| | | | |||||||| ||
Sbjct 1447 CGGTTCGAGCATAATGTATAAAGCGGTGCTTCAAGACGGAACAGCTGTGGCGGTTCGACG 1506
Query 1448 GCTCGGTGAGA-ACGGTTTGAATCAGCGCCGGTTTAAG-GATTTTG-AGTCGCACATTCG 1504
| | ||| | ||| || | || ||||||| || ||||| | || | || ||||
Sbjct 1507 AATAGCTGA-ATGCGG-TT---T-AG-ACCGGTTT-AGAGATTTCGAAG-CTCAGGTTCG 1557
Query 1505 AGCCATTGGC-AAATTGGTTCACCCGAATTTGGTTA-GACTTTGTGGGTTCTATTGGGGT 1562
|||| |||| || || | || || || ||| || || || | || |||||||||||
Sbjct 1558 AGCC-GTGGCTAAGTTAATACATCCAAACCTGG-TACGAATTCGCGGTTTCTATTGGGG- 1614
Query 1563 A-CCGACGAGAAA-TTGGTCATTTACGATTTTGTCCCTAACGGCAGCCTCG-TCAACCCC 1619
| ||||||||||| || |||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 1615 ATCCGACGAGAAACTT-GTCATTTACGATTTTGTCCCTAACGGCAGCCTCGCT-AACGCC 1672
Query 1620 CGTTACCGAAAAGGAGGAGGGTCTTCTTCACCGTATCACCTACCATGGGAAACTCGGCTC 1679
|||||||| |||| || | || ||| | | | ||| |||| ||||| ||||||||
Sbjct 1673 CGTTACCGGAAAGT-GG-GC-TCCTCT-C-CT-TGTCATTTACCTTGGGACGCTCGGCTC 1726
Query 1680 AAGATAGCAAAGGGCATTGCACGTGGGCTGGCTTATC-TCCACGAGAAGAAGCATGTGCA 1738
||||||||||| ||||| || || ||||| | || | | ||||| |||||| | |||||
Sbjct 1727 AAGATAGCAAAAGGCATAGCTCGCGGGCTAACATA-CGTACACGACAAGAAGTACGTGCA 1785
Query 1739 TGGAAACTTGAAGCCTAGTAACATACTTTTGGGCC-ATGACATGGAGCCCAAAATAGGCG 1797
||| ||| | |||||||| || || ||||||||| | || |||||||| ||| | | ||
Sbjct 1786 TGGTAACCTCAAGCCTAGCAATATCCTTTTGGGCTTA-GATATGGAGCCTAAAGTTG-CG 1843
Query 1798 -ATTTCGGACTCGAGAGGCTT 1817
||||||| || |||| ||||
Sbjct 1844 GATTTCGGTCTTGAGAAGCTT 1864
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116264462220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5