BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944140 Length=1607 Score E Sequences producing significant alignments: (Bits) Value AT4G36890.1 | Symbols: IRX14 | Nucleotide-diphospho-sugar trans... 2569 0.0 > AT4G36890.1 | Symbols: IRX14 | Nucleotide-diphospho-sugar transferases superfamily protein | chr4:17379175-17381780 REVERSE LENGTH=2187 Length=2187 Score = 2569 bits (1391), Expect = 0.0 Identities = 1544/1617 (95%), Gaps = 13/1617 (1%) Strand=Plus/Plus Query 4 AGAGGTCAACGAAGAAGATGAAGCTCTCTGCTTTACATCAGAGTTACTTGAATCGTCGGA 63 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 137 AGAGGTCAACGAAGAAGATGAAGCTCTCTGCTTTACATCAGAGTTACTTAAATCGCCGGA 196 Query 64 GTAATAGCTTCAGATCTCCGACGTCTCTTGATTCTTCCGTTGATGGCTCCGGGAAGTCTT 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 GTAATAGCTTCAGATCTCCGACGTCTCTTGATTCTTCCGTTGATGGCTCCGGGAAGTCTT 256 Query 124 TAATCGCTGTGTTTTGGCTTATCCTGCACTGTCTTTGTTGCTTGATTAGTCTAGTCCTCG 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 257 TAATCGCTGTGTTTTGGCTTATCCTGCACTGTCTTTGTTGCTTGATTAGTCTAGTTCTCG 316 Query 184 GCTTTCGATTCTCCAGATTAGtcttcttcttcctcttctctacttcttcAACGAATCTCT 243 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 317 GCTTTCGATTCTCCAGATTAGTCTTCTTCTTCCTCTTCTCTACTTCTTCAACCAATCTCT 376 Query 244 ACTCTGTTCCGTTTCGTCCTGACTTACCGGTGAAGCACCTCGATGTTCACACAATCGGCC 303 ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 377 ACTCTCTTCCGTTTCGTCCTGACTTACCTGTGAAACACCTCGATGTTCACACAATCGGCC 436 Query 304 GTAATCTGGATCCCGGAGCAAACGG---GAC---GGTGGCGATGGCGACGAAGAGCTCTC 357 ||| ||| ||||||||||| ||||| ||| |||||||| ||||||||| ||||||| Sbjct 437 GTACTCTCGATCCCGGAGCTAACGGAACGACGGTGGTGGCGACGGCGACGAAAAGCTCTC 496 Query 358 GTGTTGTCGTTGGAAGACACGGGATCCGGATCCGGCCTTGGCCGCATCCGAATCCCGTCG 417 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 497 GTGTTGTTGTTGGAAGACACGGGATCCGGATCCGTCCTTGGCCGCATCCGAATCCCGTTG 556 Query 418 AGGTAATGAAAGCTCATGGGATCATTGAGAGAGTTCAGAAGGAGCAAAAGACCATCTTTG 477 ||||||||||||||||| |||||||| ||||||||| || |||||||||| ||||||| Sbjct 557 AGGTAATGAAAGCTCATCAGATCATTGGGAGAGTTCAAAAAGAGCAAAAGATGATCTTTG 616 Query 478 GGATGAAAAGTAGTAAGATGGTTATAGCTGTGACACCGACTTATGTGAGGACTTTTCAAG 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 GGATGAAAAGTAGTAAGATGGTTATAGCTGTGACACCGACTTATGTGAGGACTTTTCAAG 676 Query 538 CTTTGCATTTGACTGGTGTGGTGCATTCGTTGATGCTTGTTCCTTATGATGTGGTTTGGA 597 |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| Sbjct 677 CTTTGCATTTGACTGGTGTGATGCATTCTTTGATGCTTGTTCCTTATGATCTGGTTTGGA 736 Query 598 TCGTTGTTGAAGCTGGTGGTGCTACTAATGAGACGGGTTTGATTATTGCTAAATCAGGGC 657 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| | Sbjct 737 TCGTTGTTGAAGCTGGTGGTGCTACTAATGAGACCGGTTTGATTATTGCAAAATCAGGAC 796 Query 658 TTAGGACGATTCATGTTGGGATTGATCAAAGAATGCCTAATACTTGGGAGGATCGTAGTA 717 ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 797 TTAGGACCATTCATGTTGGGATTGATCAGAGAATGCCTAATACTTGGGAAGATCGTAGTA 856 Query 718 AATTAGAAGTCTTTATGAGACTTCAAGCTTTGAGAGTTGTGAGGGAAGAGAAGCTTGATG 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 AATTAGAAGTCTTTATGAGACTTCAAGCTTTGAGAGTTGTGAGGGAAGAGAAGCTTGATG 916 Query 778 GGATTGTGATGTTTGCGGATGATAGTAATATGCATAGTATGGAGTTCTTTGACGAAATTC 837 |||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| Sbjct 917 GGATTGTGATGTTTGCGGATGATAGTAATATGCATAGTATGGAGTTGTTTGATGAGATTC 976 Query 838 AGAATGTGAAGTGGTTTGGTACTGTTTCTGTTGGGATATTGGCGCATTCGGGGAATGCgg 897 ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| Sbjct 977 AGAATGTGAAGTGGTTTGGTACTGTTTCTGTTGGGATATTGGCTCATTCAGGAAATGCGG 1036 Query 898 aagagatggttatgtcgatggataagaggaaagagatggagaaagaggaagaggaggaga 957 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1037 AAGAGATGGTTTTGTCGATGGAAAAGAGGAAAGAGATGGAGAAAGAGGAAGAAGAGGAGA 1096 Query 958 gCTCTTTGTTACCGGTACAAGGTCCTGCTTGTAACTCAACTGATCAGTTGATTGGTTGGC 1017 |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1097 GCTCTTCGTTACCTGTACAGGGTCCTGCTTGTAACTCAACTGATCAGTTGATTGGTTGGC 1156 Query 1018 ATATTTTCAATACATTGCCGTATGCGGGGAAGAGTGCGGTTTATATAGATGATGTTGCTG 1077 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1157 ATATTTTCAATACATTGCCATATGCGGGGAAGAGTGCAGTTTATATAGATGATGTTGCTG 1216 Query 1078 CGGTTTTGCCTCAAAAACTAGAGTGGTCTGGGTTTGTGTTGAACTCGAGATTGCTTTGGG 1137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1217 CGGTTTTGCCTCAAAAACTAGAGTGGTCTGGGTTTGTGTTGAACTCGAGATTGCTTTGGG 1276 Query 1138 AGGAAGCTGAGAATAAGCCAGAGTGGGTTAAGGACTTTGGGTCGTTGAATGAGAATGAAG 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1277 AGGAAGCTGAGAATAAGCCAGAGTGGGTTAAGGACTTTGGGTCGTTGAATGAGAATGAAG 1336 Query 1198 GTGTGGAGAGTCCTTTGTCTCTATTGAAGGATCCTTCAATGGTGGAACCTCTTGGAAGCT 1257 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1337 GTGTGGAGAGTCCTTTGTCTCTGTTGAAGGATCCTTCAATGGTGGAGCCTCTTGGAAGCT 1396 Query 1258 GTGGAAGACAGGTTCTGCTATGGTGGCTTCGAGTTGAAGCACGAGCTGATAGCAAATTCC 1317 |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 1397 GTGGAAGACAAGTTCTGCTATGGTGGCTTCGAGTAGAAGCACGCGCTGATAGCAAATTCC 1456 Query 1318 CTCCCGGATGGATAATTGATCCTCCGTTAGAGATTACAGCCGCGGCTAAACGCACTCCAT 1377 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 1457 CTCCCGGATGGATAATTGATCCTCCGTTAGAGATCACAGTTGCGGCTAAACGCACTCCAT 1516 Query 1378 GGCCAGATGTTCCTCCTGAGCCACCAACCAAAAAGAAAGATCAAATGCCATTATCCCAAG 1437 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1517 GGCCAGATGTTCCTCCTGAGCCACCAACTAAAAAGAAAGATCAAATGCCATTATCCCAAG 1576 Query 1438 GCAACACCGTCGTGGTAATACCGAAGCAGCAACAACATGCAACCAAAATCCGAAAACCGA 1497 |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||| Sbjct 1577 GCAACACCGTCGTGGTAATACCAAAGCAGCAACAACATCCAACGAAAATCCGAAAACCGA 1636 Query 1498 AACGCAGAAGTAAGAAAAATAAACACGAACCTAGACCAACGGATACA-CAA-----GTTT 1551 |||||| ||||||||||| ||||||||||||||||||||| |||||| ||| |||| Sbjct 1637 AACGCAAAAGTAAGAAAAGTAAACACGAACCTAGACCAACCGATACAACAACACAAGTTT 1696 Query 1552 ATTCATCTTCGTCTAAGCATCaagaaagaaactgagaaaagaagaaaaaa-CTTTTG 1607 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1697 ATTCATCTTCGTCTAAGCATCAAGAAAGAAACTGAGAAAAGAAGAAAAAAGCTTTTG 1753 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79367061645 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5