BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg944170

Length=827
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G37140.1 | Symbols: MEE69, MES20, ATMES20 | alpha/beta-Hydro...   664    0.0  
  AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-...  63.9    2e-09


> AT4G37140.1 | Symbols: MEE69, MES20, ATMES20 | alpha/beta-Hydrolases 
superfamily protein | chr4:17492115-17492728 REVERSE 
LENGTH=539
Length=539

 Score =  664 bits (359),  Expect = 0.0
 Identities = 456/498 (92%), Gaps = 26/498 (5%)
 Strand=Plus/Plus

Query  21   ATGAAACATTATGTGCTCGTTCACGGCGGTTGCCACGGCGCATGGTGCTGGTACAAGGTC  80
            |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGAAACATTATGTTCTTGTTCACGGCGGTTGCCACGGCGCATGGTGCTGGTACAAGGTC  60

Query  81   AAACCGGTGCTGGAAGCTTCAGGCCACCGTGTGACCGTTGTTGATCTTACGGCTTCTGGT  140
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  61   AAACCGGTGCTGGAAGCTTCAGGCCACCGTGTAACCGTTGTTGATCTTACGGCTTCTGGT  120

Query  141  GTGAACATGAGCAAAGTGGAAGAGATTCAGACTTTGGAGGATTACGCTAAGCCGTTGCTT  200
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  121  GTGAACATGAGCAAAGTGGAAGAGATTCAGACTTTGGCGGATTACGCTAAGCCGTTGCTT  180

Query  201  -AAGGTTCTTGAGTCGTTTGGTTCAGAGGATAAGGTTATCCTCGTTGCACATAGCCTCAG  259
             ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  181  GAAG-TTCTCGAGTCGTTTGGTTCAGAGGATAAGGTTATCCTCGTTGCACATAGCCTCGG  239

Query  260  AGGGATATCAGTTGGTCTTGCAGCCGACATGTTTCCTAGTAAGATCTCTGTTGCTGTCTT  319
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  240  AGGGATATCAGTTGGTCTTGCAGCTGACATGTTTCCTAGTAAGATCTCTGTTGCTGTCTT  299

Query  320  CATAACCTCTTTCATGCCTGATACAACGAATCCAC-C-TTCTTACGTTTTCGAAAAGTAT  377
            ||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| |
Sbjct  300  CATAACCTCTTTCATGCCTGATACAACGAATCCACACCTTTTTATGTTTTCGAAAAGT-T  358

Query  378  CTCGGTAGTGTTATGGAAGAAGACAGGTTAAATATGGAGTTTGGGACATATGGGAGACAT  437
             ||| | | |    | | |    | | ||   |  |||||||| ||||||||||| ||||
Sbjct  359  -TCG-T-G-G----G-A-G----C-G-TTG--T--GGAGTTTGAGACATATGGGACACAT  398

Query  438  GATCGTCCTCTAACCACTATTCTTCTTGGAACTAAA-TACTTAGCCAAGAACATGTATCA  496
            ||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||
Sbjct  399  GATCGTCCTCTAACCACTATTCTTCTTGGAACTAGTGTACTTAGCCAAGAAGATGTATCA  458

Query  497  ACTTTCTCCAATCGAAGA  514
            |||||||||| |||||||
Sbjct  459  ACTTTCTCCAGTCGAAGA  476


> AT2G23600.1 | Symbols: ACL, ATMES2, MES2, ATME8, ME8 | acetone-cyanohydrin 
lyase | chr2:10042199-10043673 REVERSE LENGTH=950
Length=950

 Score = 63.9 bits (34),  Expect = 2e-09
 Identities = 56/67 (84%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  51   TGCCACGGCGCATGGTGCTGGTACAAGGTCAAACCGGTGCTGGAAGCTTCAGGCCACCGT  110
            ||||||||||||||||||||||||||||| || ||  | || || ||||  ||||| |||
Sbjct  81   TGCCACGGCGCATGGTGCTGGTACAAGGTTAAGCCTCTTCTCGAGGCTTTGGGCCATCGT  140

Query  111  GTGACCG  117
            || ||||
Sbjct  141  GTAACCG  147



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 40287785894


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5