BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944204 Length=981 Score E Sequences producing significant alignments: (Bits) Value AT4G36730.1 | Symbols: GBF1 | G-box binding factor 1 | chr4:173... 1530 0.0 > AT4G36730.1 | Symbols: GBF1 | G-box binding factor 1 | chr4:17309612-17312488 REVERSE LENGTH=1506 Length=1506 Score = 1530 bits (828), Expect = 0.0 Identities = 904/941 (96%), Gaps = 4/941 (0%) Strand=Plus/Plus Query 3 AGTAAGTAAGCTTAT-ACACAATGGGAACGAGCGAAGACAAGATGCCATTTAAGCCTACC 61 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 301 AGT-AGTAAGCTTATAAAACAATGGGAACGAGCGAAGACAAGATGCCATTTAAGACTACC 359 Query 62 AAACCAACATCTTCGGCTCAGGAAGTTCCTCCCACACCGTATCCAGATTGGTC-AAATTC 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 360 AAACCAACATCTTCGGCTCAGGAAGTTCCTCCCACACCGTATCCAGATTGG-CAAAATTC 418 Query 121 AATGCAGGCTTATTATGGCGGAGGAGGTACGCCAAATCCTTTTTTCCCATCCCCAGTTGG 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 419 AATGCAGGCTTATTATGGCGGAGGAGGTACTCCAAATCCTTTTTTCCCATCCCCAGTTGG 478 Query 181 ATCTCCTAGTCCTCACGCTTATATGTGGGGCGCTCAACACCATATGATGCCGCCTTATGG 240 |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct 479 ATCTCCTAGTCCTCACCCCTATATGTGGGGTGCTCAACACCATATGATGCCGCCTTATGG 538 Query 241 GACCCCAGTTCCGTACCCAGCAATGTATCCCCCGGGAGCAGTCTATGCTCATCCTAGCAT 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 539 CACCCCAGTTCCGTACCCAGCAATGTATCCCCCGGGGGCAGTCTATGCTCATCCTAGCAT 598 Query 301 GCCCATGCCTCCTAATTCTGGTCCAACCAACAAGGAGACTGTGAATGACCAAGCTTCTGG 360 |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||| Sbjct 599 GCCCATGCCTCCTAATTCTGGTCCTACCAACAAGGAGCCTGCGAAGGACCAAGCTTCTGG 658 Query 361 CAAGAAGTCAAAGGGGAACTCGaaaaaaaaGGGTGAAGGAGGTGATAAAGCGCTCTCTGG 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 659 CAAGAAGTCAAAGGGGAACTCGAAAAAAAAGGCTGAAGGAGGTGATAAAGCGCTCTCTGG 718 Query 421 TTCAGGGAACGATGGTGTCTCTCATAGTGATGAAAGTGTCACAGCGGGTTCATCTGATGA 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 719 TTCAGGGAACGATGGTGCCTCTCATAGTGATGAAAGTGTCACAGCGGGTTCATCTGATGA 778 Query 481 AAATGAAGAGAATGCCAATCAACAGGAACAAGGTTCAGTTAGAAAGCCGAGCTTTGGACA 540 |||||| ||||||||||||||||||||||| |||||| || ||||||| ||||||||||| Sbjct 779 AAATGATGAGAATGCCAATCAACAGGAACAGGGTTCAATTCGAAAGCCAAGCTTTGGACA 838 Query 541 GATGCTTGCGGACGCAAGTTCTCAAAGTACTACTGGTGAAATCCAAGGTTCGGTGCCCAT 600 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 839 GATGCTTGCTGACGCAAGTTCTCAAAGTACGACTGGTGAAATCCAAGGTTCGGTGCCCAT 898 Query 601 GAAGCCGGTAGCCCCGGGGACTAATCTGAATATCGGGATGGACTTATGGTCTTCCCAAGC 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 GAAGCCGGTAGCCCCGGGGACTAATCTGAATATCGGGATGGACTTATGGTCTTCCCAAGC 958 Query 661 TGGTGTACCTGTGAAGGATGAACGAGAGCTCAAGAGGCAGAAGAGGAAACAGTCTAACCG 720 ||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 959 TGGTGTACCAGTGAAGGATGAACGAGAGCTCAAGCGGCAGAAGAGGAAACAATCTAACCG 1018 Query 721 TGAATCTGCTAGGCGGTCTAGATTGCGGAAGCAGGCGGAATGCGAACAACTTCAACAGAG 780 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1019 TGAATCCGCTAGGCGGTCTAGATTGCGGAAGCAGGCCGAATGCGAACAACTTCAACAAAG 1078 Query 781 AGTAGAGAGTTTGTCGAATGAGAATCAAAGCCTGAGAGATGAGCTACAAAGACTCTCATG 840 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct 1079 AGTAGAGAGTTTGTCGAACGAGAATCAAAGCCTGAGAGATGAGCTACAGAGACTCTCAAG 1138 Query 841 CGAATGTGAAAAGCTCAAGTCTGAGAACAACTCAATCCAGGATGAGTTGCAGAGAGTGCT 900 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1139 CGAATGTGATAAGCTCAAGTCTGAGAACAACTCAATCCAGGATGAGTTGCAGAGAGTACT 1198 Query 901 CGGAGCAGAGGCTGTAGCTAATCTAGAACAGAATGCTGCTG 941 |||||||||||||||||||||||||||||||||||||||| Sbjct 1199 TGGAGCAGAGGCTGTAGCTAATCTAGAACAGAATGCTGCTG 1239 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48023844532 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5