BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944253
Length=1693
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36210.3 | Symbols: | Protein of unknown function (DUF726) ... 2708 0.0
AT2G18100.1 | Symbols: | Protein of unknown function (DUF726) ... 1371 0.0
> AT4G36210.3 | Symbols: | Protein of unknown function (DUF726)
| chr4:17130246-17134656 FORWARD LENGTH=2481
Length=2481
Score = 2708 bits (1466), Expect = 0.0
Identities = 1621/1696 (96%), Gaps = 10/1696 (1%)
Strand=Plus/Plus
Query 1 CGAGTGATGCTTCTGTCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATG 60
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 CGAATGATGCTTCTGCCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATG 514
Query 61 CTATGGTGCATAGTATCCAAAGCTCTGTATCTAGAGATGCTAAGAAGGAGAAGCATCAGG 120
||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||| |
Sbjct 515 CTATGGTGCATAGCATTCAATGCTCTGTATCTATAGATGCTAAGAAGGAGAAGCATCAAG 574
Query 121 AATATGAAAATGAATGCCGTGAGAAATATGCGGTTCCTGAGGTAAAATCAAAAGATGTGG 180
|||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 575 AATACGAAAACGAATGCCGTGAGAAATATGCTGTTCCTGAGGTAAAATCAAAAGATGTTG 634
Query 181 ATTTGGATAAAGAGAAGGATAAGAAGGAGGCGGCTGATATTGCTGAGACAGAG-A-GTCT 238
|||||||||||||||||||||||||||| |||||||| | ||||| | |||| | ||||
Sbjct 635 ATTTGGATAAAGAGAAGGATAAGAAGGAAGCGGCTGAAAGTGCTG-CA-AGAGAAGGTCT 692
Query 239 TGAAGCTGGTGTAGTTATTATAGATGGAAGCCACAAGCCTGAAGTTCTTGAAAATGAGAA 298
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 693 TGAAGCGGGTGTGGTTATTATAGATGGAAGCCACAAGCCTGAAGTTCTTGAAAATGAGAA 752
Query 299 ATCTGTTGAGGAAGTAACATTGCTTAGCCATCAGAGGAAGATAAATGTTCTTTATGAGCT 358
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 753 GTCTGTTGAGGAAGTAACATTGCTTAGTCATCAGAGGAAGATAAATGTTCTTTATGAGCT 812
Query 359 ACTTTCTGCTTGCTTGTCAGACAAACATCAAGAGGATAATAAATGTAAACGGCGTAGAAA 418
||||||||||||||||||||| |||||||| |||||||| |||||||||||| |||||||
Sbjct 813 ACTTTCTGCTTGCTTGTCAGATAAACATCACGAGGATAAGAAATGTAAACGGTGTAGAAA 872
Query 419 AGGCTATGATGCGCGTCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGA 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 AGGCTATGATGCGCGTCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGA 932
Query 479 GTGGATTAAAGTGGAAGCAATTGAGACAATGGTCGCATGCTCTGCCATGGCTATTCAGAA 538
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 933 GTGGATTAAAGTGGAAGCAATTGAGACAATGGTCGCATGCTCTGCCATGGCCATTCAGAA 992
Query 539 GTCTGCTGAAATGAAGGGTGAAGATGCTCTGTCTACTACAACTTCATGGGCTAAGTGGAA 598
||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||||
Sbjct 993 GTCTGCTGAAATGAAGGGTGAAGATAATCTAACTCCTACGACTTCATGGGCTAAGTGGAA 1052
Query 599 GCGTGGAGGCATCATTGGTGCCGCTGCTATTACAGGGGGCACTTTGATGGCCATCACTGG 658
||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1053 GCGAGGAGGCATCATTGGTGCCGCTGCTATTACAGGAGGCACTTTGATGGCCATAACTGG 1112
Query 659 TGGATTGGCTGCTCCAGCTATTGCTGCAGGGTTTGGTGCATTGGCACCAACACTGGGCAC 718
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1113 TGGATTGGCTGCTCCAGCTATAGCTGCAGGATTTGGTGCATTGGCACCAACACTGGGCAC 1172
Query 719 ACTTATACCGGTGATTGGAGCTGGTGGG-TTTGCTGCTGCAGCTAGTGCCGCTGGAACTG 777
| |||| ||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||
Sbjct 1173 AATTATTCCGGTGATTGGAGCTGG-GGGTTTTGCTGCTGCGGCTAGTGCCGCAGGAACTG 1231
Query 778 TTGCTGGCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGA 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 TTGCTGGCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGA 1291
Query 838 CTAAGATGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 CTAAGATGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAA 1351
Query 898 ATCATAATCAAGGACGGTTAGCAGTGGAAGTCTTGGTTGCTGGTGTTGTTTTTGAAGAAG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 ATCATAATCAAGGACGGTTAGCAGTGGAAGTCTTGGTTGCTGGTGTTGTTTTTGAAGAAG 1411
Query 958 AAGATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAAT 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 AAGATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAAT 1471
Query 1018 GGGAGTCCAAGAATCTTATCTTAGTGAGCACAGCAATTCAGGATTGGCTTACTTCAAGAC 1077
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1472 GGGAGTCCAAGAATCTTATCTTAGTGAGCACAGCGATTCAGGATTGGCTTACTTCAAGAC 1531
Query 1078 TTGCCATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGG 1137
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1532 TTGCAATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGG 1591
Query 1138 CATTAGCATGGCCAGCGACTATCTTAGTAGCCGCTGATTTCATAGATAGCAAATGGAGTA 1197
|||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1592 CATTGGCATGGCCAGCGACAATCTTAGTAGCTGCTGATTTCATAGATAGCAAATGGAGTA 1651
Query 1198 TTGCTATTGATAGGTCGGACAAAGCAGGAAGACTTCTAGCTGAAGTACTACAAAAAGGCT 1257
|||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1652 TTGCTATTGACAGGTCGGATAAAGCAGGAAGACTTCTAGCTGAAGTGCTACAAAAAGGCT 1711
Query 1258 TGCAAGGAAATAGACCCATCACTCTCGTAGGTTTTTCACTTGGTGCTCGTGTCATCTTCA 1317
||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 1712 TGCAAGGAAATAGACCCATCACTCTAGTTGGTTTTTCGCTTGGTGCTCGTGTCATCTTCA 1771
Query 1318 AATGCCTCCAAGCTCTGGCCGAGACAGAACAAAACGCTGAACTTGTGGAAAGAGTTGTTC 1377
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1772 AATGCCTCCAAGCTCTGGCTGAGACAGAACAAAACGCTGAACTTGTGGAGAGAGTTGTTC 1831
Query 1378 TTCTTGGAGCACCCATTTCAATCAATAATGAAAACTGGCGAGACGTAAGGAAGATGGTAG 1437
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1832 TTCTTGGAGCACCCATTTCAATCAATAGTGAAAACTGGCGAGACGTAAGGAAGATGGTCG 1891
Query 1438 CTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTATCGCATTTCGGG 1497
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1892 CTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTATCGCATTTCGTG 1951
Query 1498 CTAGTTTA-TTCTCCCAAGGATTAGCGGGAATCCAACCAATTTGTATCCCTGGGATCGAA 1556
|||||||| || |||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 1952 CTAGTTTAATT-TCCCAAGGATTAGCCGGAATCCAACCAATATGTATCCCTGGTATCGAA 2010
Query 1557 AATGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGCAG 1616
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011 AACGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGCAG 2070
Query 1617 ATTCTAGACAGACTCGAAATCGACACTTATTACCCTGTTTTTAGAGACACTCTCTAACGC 1676
||| |||| |||||||| |||||||| ||||||||||||||| |||||||||| |||| |
Sbjct 2071 ATTTTAGAAAGACTCGAGATCGACACATATTACCCTGTTTTTCGAGACACTCTTTAAC-C 2129
Query 1677 AAA-TCAAATTAGATA 1691
||| ||||||||||||
Sbjct 2130 AAAATCAAATTAGATA 2145
> AT2G18100.1 | Symbols: | Protein of unknown function (DUF726)
| chr2:7867828-7871642 FORWARD LENGTH=2377
Length=2377
Score = 1371 bits (742), Expect = 0.0
Identities = 1214/1440 (84%), Gaps = 40/1440 (3%)
Strand=Plus/Plus
Query 255 ATTATAGATGGAAGCCACAAGCCT-GAAGTTCTTGAAAATGAGAAATCTGTTGAGGAAGT 313
|||| ||||||| ||||||| | | | | || ||||| |||||||| |||||| ||||||
Sbjct 654 ATTAGAGATGGAGGCCACAATCTTGGGA-TTGTTGAACATGAGAAACCTGTTGGGGAAGT 712
Query 314 AACATTGCTTAGCCATCAGAGGAAGATAAATGTTCTTTATGAGCTACTTTCTGCTTGCTT 373
| |||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 713 AGCATTGCTTAGCCATGAGAGAAAGATAAATGTTCTTTACGAGCTACTATCTGCTTGCTT 772
Query 374 GTCAGACAAACATCAAGAGGATAATAAATGTAAACGGCGTAGAAAAGGCTATGATGCGCG 433
| |||| |||||| | ||| || | | ||||| ||||||||| |||||||||||||||||
Sbjct 773 GGCAGATAAACATGAGGAGAATGAGATATGTACACGGCGTAGGAAAGGCTATGATGCGCG 832
Query 434 TCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGAGTGGATTAAAGTGGA 493
||||| ||||||||| || |||||||| || |||||| || || ||||||||||| ||||
Sbjct 833 TCACCATGTTGCTCTGCGGTTACTTGCTACTTGGTTTGACTTTCAGTGGATTAAAATGGA 892
Query 494 AGCAATTGAGACAATGGTC-GCATGCTCTGCCATGGCTATT-CAGAAGTC-TGCT-GAAA 549
|||| |||||||||| ||| ||||||||||||||||| ||| || ||||| | | ||||
Sbjct 893 AGCAGTTGAGACAAT-GTCTGCATGCTCTGCCATGGC-ATTGCAAAAGTCAAG-TGGAAA 949
Query 550 TGAAGGGTGAAGATG-CTCTGTCTACTACA-ACTTCATGGGCTAAGTGGAAGCGTGGAGG 607
| |||| ||||| | || |||| || | | | | ||||||||||||||| ||||||||
Sbjct 950 T-AAGGAAGAAGA-GTCTTTGTC-ACCAAATAGTGAATGGGCTAAGTGGAAACGTGGAGG 1006
Query 608 CATCA-TTGGTGCCGCTGCTATT-ACAGGGGGCACTTTGATGGCCATCACTGGTGGATTG 665
||| | |||| || |||||| || |||||||| || ||||||||||||||||||||||||
Sbjct 1007 CAT-AGTTGGAGCGGCTGCT-TTAACAGGGGGTACATTGATGGCCATCACTGGTGGATTG 1064
Query 666 GCTGCTCCAGCTATTGCTGCAGGGTTTGGTGCATTGGCACCAACACTGGGCACACTTA-T 724
||||||||||| || ||||||||||| ||||||||||| ||||| || |||||| | | |
Sbjct 1065 GCTGCTCCAGCAATAGCTGCAGGGTTCGGTGCATTGGCTCCAACTCTAGGCACAAT-AGT 1123
Query 725 ACCGGTGATTGGAGCTGGTGGGTTTGCTGCTGCAGCT-AGTGCCGCTGGAACTGTTGCTG 783
||||| |||||||| ||||||||||||| || ||| || || || |||||||||||||
Sbjct 1124 TCCGGTAATTGGAGCCAGTGGGTTTGCTGCAGCTGCTGAG-GCTGCCGGAACTGTTGCTG 1182
Query 784 GCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGACTAAGA 843
| || ||||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct 1183 GTTCTGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACTGGGACGAAGA 1242
Query 844 TGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAAATCATA 903
|||| ||||||| ||| ||| |||| ||||| ||||| ||||||||||| ||||||||||
Sbjct 1243 TGGCTAGGAGAACTGGTGACATTGAAGAGTTTGAATTCAAAGCTATTGGAGAAAATCATA 1302
Query 904 ATCAAGGACGGTTAGCAGTGGA-AGTCTTGGTTGCTGG-TGTTGTTTTTGAAG-AAGAAG 960
|||||||||| ||||| ||||| | |||| |||||||| | ||||||| ||| ||||||
Sbjct 1303 ATCAAGGACGATTAGCGGTGGAGA-TCTTAGTTGCTGGCT-TTGTTTTA-AAGGAAGAAG 1359
Query 961 ATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAATGGG 1020
| ||||| ||||| ||||||||||||||||| || || || ||||||||| |||||||||
Sbjct 1360 ACTTTGTAAAACCCTGGGAAGGGTTAACTAGCAACCTAGAAAGGTACACGGTGCAATGGG 1419
Query 1021 AGTCCAAGAATCTTATCTT-AGTGAGCACAGCAATTCAGGATTGGCTTACTTCAAGACTT 1079
| ||| ||||| |||| | ||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1420 AATCCGAGAATATTAT-TGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTT 1478
Query 1080 GCCATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGGCA 1139
|| ||||| ||||||| ||| || ||||||| ||| || | ||| |||||| |||
Sbjct 1479 GCTATGGAGTTGATGAGACAAGGTGCAATGCGCACCGTACTAAACTCGCTTTTAGCAGCA 1538
Query 1140 TTAGCATGGCCAGCGACTATC-TTAGTAGCCGCTGATTTCATAGATAGCAAATGGAGTAT 1198
| | ||||| || || ||| || ||||| |||||||| |||||||| | |||||||||
Sbjct 1539 ATGGTTTGGCCGGCAACAATCCTT-GTAGCTGCTGATTTTATAGATAGTAGATGGAGTAT 1597
Query 1199 TGCTATTGATAGGTCGGACAAAGCAGG-AAGACTTCTAGCTGAAGTACTACAAAAAGGCT 1257
||||||||| ||||| ||||||||||| ||| ||||| ||||||| || | |||||| |
Sbjct 1598 TGCTATTGACAGGTCAGACAAAGCAGGGAAG-CTTCTTGCTGAAGCGCTTCGAAAAGGGT 1656
Query 1258 TGCAAGGAAATAGACCCATCACTCTCGTAGGTTTTTCACTTGGTGCTCGTGTCATCTTCA 1317
|||||||||||||||| | ||||| || |||||||| |||||||| ||||| |||| |
Sbjct 1657 TGCAAGGAAATAGACCTGTGACTCTGGTTGGTTTTTCGCTTGGTGCACGTGTTGTCTTTA 1716
Query 1318 AATGCCTCCA-AGCTCTGGCCGAGACAGAACAA-AACGCTGAACTTGTGGAAAGAGTTGT 1375
| |||||||| | ||||||| ||||| ||| || || |||||| ||||||||||||||||
Sbjct 1717 AGTGCCTCCAGA-CTCTGGCAGAGACTGAA-AAGAATGCTGAAATTGTGGAAAGAGTTGT 1774
Query 1376 TCTTCTTGGAGCACCCATTTCAATCAATAATGAAAACTGGCGAGACGTAAGGAAGATGGT 1435
||||||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct 1775 TCTTCTTGGAGCACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGT 1834
Query 1436 AGCTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTA-TCGCATTTC 1494
|||||||||||||| |||||||| ||||||||||| |||||||| || | | |||||||
Sbjct 1835 GGCTGGAAGATTCATTAATGTTTACGCCACAAATGACTGGACCCTCGG-AGTTGCATTTC 1893
Query 1495 GGGCTAGTTTATTCTCCCAAGGATTAGCGGGAATCCAACCAATTTGTATCCCTGGGATCG 1554
| || ||| | || |||||||||||||| ||||||||||| | ||||| || ||||| |
Sbjct 1894 GTGCAAGTCTGTTGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATTG 1953
Query 1555 AAAATGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGC 1614
|| |||| |||||||| |||||||||||||||||||| || || |||||||||||||| |
Sbjct 1954 AAGATGTAGATGTAACGGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAAC 2013
Query 1615 AGATTCTAGACAGACTCGAAATCGACACTTATTACCCTGTTTTTAGAGACACTCTCTAAC 1674
| || || || ||||||||| |||||| || ||||||||||||| || ||||||||||||
Sbjct 2014 AAATCCTGGAAAGACTCGAACTCGACAATTCTTACCCTGTTTTTCGAAACACTCTCTAAC 2073
Score = 100 bits (54), Expect = 4e-20
Identities = 131/166 (79%), Gaps = 13/166 (8%)
Strand=Plus/Plus
Query 5 TGATGCTTCT-GTCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATGCTA 63
||||| |||| || || ||||||||| |||||| |||||||||||||||||||||||||
Sbjct 443 TGATGATTCTAGT-GAAATGGTGGAGAAAGAGACCGCCTTAGCTAAAGCTGCTGATGCTA 501
Query 64 TGG-TGCATAGTATCC-AA--AGCTCTGTATCTAGAG-A-TGCTAAGAAGGAGAAGCATC 117
||| | || | || | || |||||| ||||| | | | | |||||| |||||| |||
Sbjct 502 TGGAT-CAAAACATTCGAAGCAGCTCTCTATCT-GTGGAAT-CTAAGATGGAGAAACATG 558
Query 118 AGGAATAT-GAAAATGAATGCCGTGAGAAATATGCGGTTCCTGAGG 162
||||| | ||||| |||||||| || || ||| | ||||| ||||
Sbjct 559 TGGAAT-TCGAAAACGAATGCCGCGACAAGTATTCTGTTCCCGAGG 603
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83684308515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5