BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944315
Length=892
Score E
Sequences producing significant alignments: (Bits) Value
AT4G35690.1 | Symbols: | Arabidopsis protein of unknown functi... 1229 0.0
AT4G35710.1 | Symbols: | Arabidopsis protein of unknown functi... 632 2e-180
AT2G17680.1 | Symbols: | Arabidopsis protein of unknown functi... 220 1e-56
> AT4G35690.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16921803-16922963 FORWARD LENGTH=1161
Length=1161
Score = 1229 bits (665), Expect = 0.0
Identities = 819/894 (92%), Gaps = 7/894 (1%)
Strand=Plus/Plus
Query 1 AAAGCATA-T-TATaaaaaaaaaTGTCGAATATGATCGTCAAGAATCAACTAAGATCTAT 58
|||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 62 AAAGCATATTATATAAAAAAAAATGTCGAATATGCTCGTCAAGAATCAACTAAGATCTAT 121
Query 59 AAGCTTACCTTCAAGATCGCATCCAAGCACGACCGGGGTCGAGGAAGCTCTTAACAAGGT 118
||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct 122 AAGCTTACCTTCAAGCTCGCATCCAAGCACGACCGGTATCGAGGAATCTCTTAACAAGGT 181
Query 119 TAATTCGATTAACACCACGACTGGTTCGTCCGAATCAGTCTTGATGGGCTTGGCGGGTTT 178
|| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 182 CAAAACGATTAACACCATGACGGGTTCGTCCGAATCAGTCTTGATGGGCTTGGAGGGTTT 241
Query 179 GGAGGAGCTCTACAATTGTACGGAGGAGTTTCTGAAAATGGGCTCAACGCAACGGGTTTT 238
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
Sbjct 242 GGAGGAGCTCTACAATTGTACGGAAGATTTTCTGAAAATGGGCTCAACGCAACGGGTTAT 301
Query 239 GTCGTCA---GATGGATCTGAGTTCATGGAGGAAATGCTTGACGGTTCGTTGAGGCTAAT 295
||| ||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 302 GTCATCATCTGATGGATCCGAGTTTATGGAGGAGATGCTTGACGGTTCGTTGAGGCTAAT 361
Query 296 GGATATATGCAGCGTTTCGAGGGATCTCATGGTGGAGACTCACGAGCATGTTCGTGGTGT 355
|||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 362 GGATATATGCAGTGTCTCGAGGGATCTCATGGTGGAGACTCAAGAGCATGTTCGTGGTGT 421
Query 356 TCAATCATGTCTTAGGAGAAAGAAATTAGCCGGAGGAGGAGACCAACTCGATGTTGCCAT 415
|||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| ||| |
Sbjct 422 TCAATCATGTGTCAGGAGAAAGAAAGTAGTCGGAGGAGAAGACCAACTCGATGTCGCCGT 481
Query 416 CTCGGGGTATGTCGGATTTAGAAAGAACATGAGGAAAGAAGCTAAGAAGCTTCTTGGATC 475
| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 482 CGCGGGGTATGTCGGATTTAGAAAGAACATGAGAAAAGAAGCTAAGAGGCTTCTTGGATC 541
Query 476 CTTGAAGAACATTGATGGAGGATTAAGTTCATCTTTATCGGTAAATAATGGTCAGAAAGA 535
|||||||||||||||||||| ||||||||||| | ||| |||||||||||| || ||||
Sbjct 542 TTTGAAGAACATTGATGGAGGTTTAAGTTCATCATCATCAGTAAATAATGGTGAGCAAGA 601
Query 536 AGAACATCTTGTGGCGGTTACAAATGCAATGAGAAAAGTAGTTTCCGTTAGCGTCTCGGT 595
|||||||||||||| |||| | | || |||||| |||||||||||||||||||| ||||
Sbjct 602 AGAACATCTTGTGGTGGTTGTAGACGCCATGAGACAAGTAGTTTCCGTTAGCGTCGCGGT 661
Query 596 GTTGAGGTCGTTTTTGGAGTTCTTATTGGGAAGAAAACAAAGTAACATTAAGAGCAAGCT 655
|||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct 662 GTTGAGGTCGTTTTTGGAATTCTTATCCGGACGACGACAAAGTAACATTAAGAGCAAGCT 721
Query 656 GGCTTCGGTACTAAAGAAAAAGAAGGTTCATCATGTTGAGGAGACCAAGAACGAGTTGGA 715
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 722 GGCTTCGGTACTAAAGAAAAAGAAGGTTCACCATGTTGAGGAGACCAAGAACGAGTTGGA 781
Query 716 GAGTTTGGAT-TCGGCGATATGCTGCTCTTGTGATGATCTTCAAGAGAAGCTTGAGGAGG 774
|| ||||||| || | ||||| ||| ||| || ||||||| ||| ||||||||||||| |
Sbjct 782 GAATTTGGATCTC-GAGATATTCTGTTCTCGTAATGATCTACAAAAGAAGCTTGAGGAAG 840
Query 775 TTGAGATGAGCATCGATGGGTTCGAGAAGAATCTAGAAGGGTTATTTCGAAGGTTGATAA 834
||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 841 TTGAGATGAGCATTGATGGATTCGAGAAGAAACTAGAAGGACTATTTCGAAGGTTGATAA 900
Query 835 GAACACGAGCCTCGCTTCTCAACATAATATCTCATTAGATTTTAAAGTATTCAT 888
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 901 GAACACGAGCCTCGCTTCTCAACATAATATCTCATTAGGTTTTAAAGTATTCAT 954
> AT4G35710.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16925301-16926152 FORWARD LENGTH=852
Length=852
Score = 632 bits (342), Expect = 2e-180
Identities = 706/876 (81%), Gaps = 48/876 (5%)
Strand=Plus/Plus
Query 21 ATGTCGAATATGATCGTCAAGAATCAACTAAGATCTATAAGCTTACCTTCAAGATCGCAT 80
||| ||||||||||| | ||||| || ||||||||||||| |||||||| ||||| ||
Sbjct 1 ATGGCGAATATGATCATTAAGAAACAGTTAAGATCTATAAGTTTACCTTCTAGATCACAA 60
Query 81 CCAAGCACGACCGGGGTCGAGGAAGCTCTTAACAAGGTTAATTCGATTAACACCACGACT 140
|||||||| | ||| |||| ||| ||||||| ||| |||| | ||||||||||||||
Sbjct 61 CCAAGCACAAGTGGGCTCGAAGAATCTCTTAATAAGATTAAAACAATTAACACCACGACG 120
Query 141 GGTTCGTCCGAATCAG-TCTTGATGGGCTTGGCGGGTTTGGAGGAGCTCTACAATTGTAC 199
||||| ||||| || | |||||||||||||||| |||||||||||||||||| ||| | |
Sbjct 121 GGTTCATCCGAGTC-GATCTTGATGGGCTTGGCTGGTTTGGAGGAGCTCTAC-ATTTTTC 178
Query 200 -GGAGGAGTTTCTGAAAATGGGCTCAACGCAACGGGTTTTGTCGTCAGATGGATCTGAGT 258
||||||||||||||||||||| |||| |||||||||| |||| || | ||| || || |
Sbjct 179 TGGAGGAGTTTCTGAAAATGGGTTCAAAGCAACGGGTTATGTCCTCTGGTGGGTCGGAAT 238
Query 259 TCATGGAGGAAATGCTTGACGGTTCGTTGAGGCTAATGGATATATGCAGCGTTTCGAGGG 318
||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct 239 TCATGGAGGAAATGCTTGATGGTTCGTTGAGGCTGATGGATATCTGCAGCGTCTCAAGGG 298
Query 319 ATCTCATGGTGGAGACTCACGAGCATGTTCGTGGTGTTCAATCATGTCTTAGGAGAAAGA 378
|||| ||||||||||||||||||||||||||||| ||||| |||| | |||| |||||||
Sbjct 299 ATCTAATGGTGGAGACTCACGAGCATGTTCGTGGCGTTCAGTCATATGTTAGAAGAAAGA 358
Query 379 AATTAGCCGG---AGGAGGAG-ACC-AAC-TCGATGTTGCCATCTCGGGGTATGTCGGAT 432
|| || | || |||||||| | || ||||||| || |||| | ||||||||||
Sbjct 359 AAGTATCTGGTGGAGGAGGAGGAGATAAAATCGATGTCGCTGTCTCCGACTATGTCGGAT 418
Query 433 TTAGAAAGAACATGAGGAAAGAAGCTAAGAAGCTTCTTGGATCCTTGAAGAACATT-GAT 491
|||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | | |||
Sbjct 419 TTAGGAAGAACATGAGAAAAGAAGCCAAGAAGCTTCTAGGATCCTTGAAGAA-AGTCGAT 477
Query 492 GGAGG-ATTAAGTTCATCTTTATCGGTAAATAATGGTCA-GAAAGAAGAACATCTTGTGG 549
||||| | | |||||| | | | ||||| ||| ||| || ||||| |||||||
Sbjct 478 GGAGGGACTC-GTTCATGT-----G--A--TAATGATCATGAA-GATGAACAACTTGTGG 526
Query 550 CGGTTACAAAT-GCAATGAGAAAAGTAGTTTCCGTTAGCGTC-TCGGTGTTGAGGTCGTT 607
|||||| | || | ||||| ||| || || || || ||| ||| | |||| ||||||
Sbjct 527 CGGTTATAGATAGGG-TGAGACGAGTGGTATCGGTAAGTGTCGTCG-TATTGAAGTCGTT 584
Query 608 TTTGGAGTTCTTATTGGGAAGAAAACAAAGTAACATTAAGAGCAAGCTGGCTTCGGTACT 667
||||| || || | || ||||| | ||||||| ||||||||| |||| ||||||||
Sbjct 585 CTTGGAATTATTGTCCAGACGAAAA-A--GTAACATAAAGAGCAAGTTGGCGTCGGTACT 641
Query 668 AAAGAAAAAGAAGGTTCATCATGTTGAGGAGACCAAGAACGAGTTGGAGAGTTTGGATTC 727
||||| ||||||| | | |||| | || ||||||||| |||||||| || |||||
Sbjct 642 AAAGATGAAGAAGGATAACCATGC-GCC-AG-CCAAGAACGTGTTGGAGACATTAGATTC 698
Query 728 GGCGATATGCTGC--TCTTGT-------GATGATCTTCAAGA-GAAGCTTGAGGAGGTTG 777
||||| | | | | || | |||||||||||| | || |||||| |||||||
Sbjct 699 CGCGATTTTCGGAGATTTTTTATCTCATGATGATCTTCAAAATGA-GCTTGAAGAGGTTG 757
Query 778 AGATGAGCATCGATGGGTTCGAGAAGAA-TCTAGAAGGGTTATTTCGAAGGTTGATAAGA 836
||||| |||| | ||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct 758 AGATGTGCATTGGTGGGTTCGAGA-GAAATCTAGAAGGGTTGTTTCGAAGGTTGATAAGA 816
Query 837 ACACGAGCCTCGCTTCTCAACATAATATCTCATTAG 872
|||||||||||| ||||||||||||| || ||||||
Sbjct 817 ACACGAGCCTCGATTCTCAACATAATCTCCCATTAG 852
> AT2G17680.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7679008-7680378 FORWARD LENGTH=1371
Length=1371
Score = 220 bits (119), Expect = 1e-56
Identities = 491/658 (75%), Gaps = 76/658 (12%)
Strand=Plus/Plus
Query 255 GAGTTCATGGAGGAAATGCTTGACGGTTCGTTGAGGCTAATGGATATATGCAGCGTTTCG 314
||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||
Sbjct 504 GAGTTTATGGAGGAAATGCTTGATGGTTCGTTGAGGCTAATGGATATATGCAACGTCTCG 563
Query 315 AGGGATCTCATGGTGGAGACTCACGAGCATGTTCGTGGTGTTCAATCATGTCTTAGGAGA 374
|||||||||||||| |||||||| |||||||||| |||| |||| ||||| | |
Sbjct 564 AGGGATCTCATGGTTGAGACTCATGAGCATGTTCTTGGTCTTCA-----GTCTT-GT-G- 615
Query 375 AAGAAATTAGCCGGAGGAGGAGACCAACTCGATGTTGCCATCTCGGGGTATGTCGGATTT 434
|||| | || |||| | | ||||| | | ||||||| |||||||| |||
Sbjct 616 ------TTAG--G-AGAAGGA-A--A----GATGTCGACGTCTCGGGATATGTCGGGTTT 659
Query 435 AG-AAAGAACATGAGGAAAGAAGCT-AAGAAGCTTCTTGGATCCTTGAAGAACATTGATG 492
|| ||| |||||||||||||||| | ||||||||||||||||| || ||||||||| |||
Sbjct 660 AGGAAA-AACATGAGGAAAGAAG-TGAAGAAGCTTCTTGGATCTTTAAAGAACATTAATG 717
Query 493 GAGGATTAAGT--TCATCTTT-ATCGGTAAATAATGGTCA-GAAAGAAGA-A--CATCTT 545
||| ||| || | | | || ||| || || ||| || | || | ||| ||
Sbjct 718 TAGGGTTA-GTGATGAGAGATCAT-GGT---TA-TGATCAAGACGGT-GATATTCAT-TT 769
Query 546 GT-GGCGGTTACAAATGCAATGAGAAAAGTAGTTTCCGTTAGC-GTCTCGGTGTTGAGGT 603
| ||| || | ||||||||||| || |||| | | | || ||||| || | ||
Sbjct 770 CTTGGCCGTGATTCATGCAATGAGACGTGTCGTTTATATGA-CAGTTTCGGTCTTAAAGT 828
Query 604 CGTT-TTTGGAGTTCTTATTGGGAAGAAAACAAAGT-AAC-AT-TAAG-AGCAAGCTGGC 658
| || |||| ||||||| | |||| || || || | ||| | |||| |||||| ||||
Sbjct 829 CTTTCTTTG-AGTTCTTGTCGGGACGACAA-AACGGGAACGACGTAAGGAGCAAGTTGGC 886
Query 659 TTCGGTACTAAAGAAAAAGAAGGTTCATCATGTTGAGGAGAC---CAAGAACGAGTTGGA 715
|| || || | ||| |||||| ||||| || || ||| ||| |||||||||||
Sbjct 887 TTTAGTTCTCATGAACAAGAAGTTTCATGATCACGATAAGATGGTCAAAAACGAGTTGGA 946
Query 716 GAGTTTGGATTCGGCGATATGCTG------CT--CT-TG-TGATGATCTTCAAGAGAAGC 765
|| | | ||||| ||||| || || || || | |||||||||||| |||||||
Sbjct 947 GAATGTAGATTCCGCGATTTG-TGGAGATTCTATCTCTCATGATGATCTTCATGAGAAGC 1005
Query 766 TTGAGGAGGTTGAG--ATGAGCATCG-ATGGGTTCGAGAAGAATCTAGAAGGGTTATTTC 822
||||||| |||||| ||| | || | | |||||||||| ||| ||||| || ||||
Sbjct 1006 TTGAGGAAGTTGAGGTATG-G-ATTGGAAAA-TTCGAGAAGAGTCTTGAAGGATTGTTTC 1062
Query 823 GAAGGTTGAT-AAGAACACGAGCCTCGCTTCTCAACATAATATCTCATTAGAT-TTTA 878
|| ||||||| || ||||||||||||||||||||||||||| ||||| ||| | ||||
Sbjct 1063 GAGGGTTGATTAA-AACACGAGCCTCGCTTCTCAACATAATCTCTCAATAGGTGTTTA 1119
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43553005449
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5