BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944364 Length=896 Score E Sequences producing significant alignments: (Bits) Value AT4G35280.1 | Symbols: | C2H2-like zinc finger protein | chr4:... 1277 0.0 > AT4G35280.1 | Symbols: | C2H2-like zinc finger protein | chr4:16787429-16788283 REVERSE LENGTH=855 Length=855 Score = 1277 bits (691), Expect = 0.0 Identities = 804/858 (94%), Gaps = 9/858 (1%) Strand=Plus/Plus Query 23 ATGAACAACAATCATTCCTTTTATGATCGCAATTTTCACATTCCACTTCATCCTTCTAAC 82 ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct 1 ATGAACAACAATCATTCCTATGATGATCGCAGTTTTCACATTCCACTTCATCCTTCTAAC 60 Query 83 GCAAGCAACCCTAATCCAAATCTCCAGTTTGCTTTATCTTCAAGCTACGAACACAGTCCT 142 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 61 ACAAGCAACCCTAATCCAAATCTCCAGTTTGCTTTATCTTCAAGCTACGATCACAGTCCT 120 Query 143 AAGAAGAAACGCACCAAAACCGTTGCTTCATCTTCTAGTTCTTCACCAAAGTCCGCATCA 202 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 121 AAGAAGAAACGCACCAAAACCGTTGCTTCATCCTCTAGTTCTTCACCAAAATCCGCGTCA 180 Query 203 AAACCCAAATACACCAGAAAACCAGATCCAAATGCCCCCAAAATCACTCGTCCATGTACT 262 ||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||| Sbjct 181 AAACCAAAATACACCAAAAAACCAGACCCAAATGCCCCCAAAATCACACGTCCATGTACT 240 Query 263 GAATGTGGCAGACAGTTTTGGTCTTGGAAAGCTCTCTTTGGTCACATGAGATGTCACCCT 322 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 241 GAATGTGGCAGAAAGTTTTGGTCTTGGAAGGCTCTCTTTGGTCACATGAGATGTCACCCT 300 Query 323 GAGCGTCAATGGCGTGGCATTAATCCTCCTCCTAACTACCGTGC-CTCCACTACGGCTTC 381 ||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| Sbjct 301 GAGCGTCAATGGCGTGGCATTAATCCTCCTCCTAACTACCGTGTGC-CCACCGCGGCTTC 359 Query 382 ATCAAGACAACTAAACCAGAGATCACCAAATTGGGTCTCATTTATGTCTGAGGAAGACCA 441 |||| ||| ||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct 360 TTCAAAACAGTTAAACCAGATATTACCAAATTGGGTCTCATTTATGTCCGAGGAAGACCA 419 Query 442 TGAAGTCGCTTCTTGTCTCTTACTGTTGTCTAATGGCACACCATCATCATCGAGTAGTGA 501 |||||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||| Sbjct 420 TGAAGTCGCTTCTTGTCTCTTAATGCTGTCTAATGGTACACCATCATCATCGAGTATTGA 479 Query 502 ACGGTTTGAGTGTGGAGGATGTAAGAAAGTGTTTGGATCACATCAGGCTTTAGGAGGACA 561 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ACGGTTCGAGTGTGGAGGATGTAAGAAAGTGTTTGGATCACATCAGGCTTTAGGAGGACA 539 Query 562 CAGAGCGAGTCACAAGAACGTTAAAGGATGTTTCGCTATCACAAACGTAACCGATGATCC 621 |||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 540 CAGAGCGAGTCATAAAAACGTTAAAGGCTGTTTCGCTATCACAAACGTAACCGATGATCC 599 Query 622 TATGACGGTTACTACTTCTAGTGATCAAGATCA-CAAGGCAAAAATCCTTACGTTTTCGG 680 |||||||||| |||||||||||| || ||||| || || |||||||||||||||||| | Sbjct 600 TATGACGGTTTCTACTTCTAGTGGGCATGATCATCAGGG-AAAAATCCTTACGTTTTCAG 658 Query 681 GGCATCATAAGTGTAATATCTGTTTTAGGGTGTTCCCGAGTGGTCAAGCTTTAGGAGGTC 740 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 659 GGCATCATAAGTGTAATATCTGTTTTAGAGTGTTCTCGAGTGGTCAAGCTTTAGGAGGTC 718 Query 741 ACATGAGATGTCACTGGGAAAGAGAAG-AGGAGACGATGATCAGTGGTGCTTTGGATTTG 799 ||||||||||||| ||||||| || || ||||| |||||||||||||||||||||||||| Sbjct 719 ACATGAGATGTCATTGGGAAA-AGGAGGAGGAGCCGATGATCAGTGGTGCTTTGGATTTG 777 Query 800 AATGTTCCTGCAA---TACAGGATCTTTCTACTTCGGACACATCAGGGTGTTGTTTAGAT 856 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 AATGTTCCTCCAACAATACAGGATCTTTCTACTTCGGACACATCAGGGTGTTGTTTAGAT 837 Query 857 CTTAGGTTAGGACTTTAA 874 |||||||||||||| ||| Sbjct 838 CTTAGGTTAGGACTCTAA 855 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43753942037 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5