BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944406
Length=1001
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34920.1 | Symbols: | PLC-like phosphodiesterases superfami... 1602 0.0
AT4G34930.1 | Symbols: | PLC-like phosphodiesterases superfami... 1042 0.0
> AT4G34920.1 | Symbols: | PLC-like phosphodiesterases superfamily
protein | chr4:16635684-16636975 FORWARD LENGTH=1292
Length=1292
Score = 1602 bits (867), Expect = 0.0
Identities = 954/997 (96%), Gaps = 2/997 (0%)
Strand=Plus/Plus
Query 2 CTTCTTCATCAATCTCTCAAAACATGCTCTCTTTTTTCTCTAACCAGATCGACCGGCAAA 61
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 39 CTTCATCATCAATCTCTCAAGACATGCTCTCTTTTTTCTCTAACCAGATCGACCGGCAAA 98
Query 62 AAGATGTGTCCAATGAGGAAAAAACCCTAACTGATCTCGAAAAATCCGACGGTTCACAAT 121
|||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 99 AAGATGTGTCTAATGAGGAAAAAACCCTAACCAATCTCGAAAAATCTGACGGTTCACAAT 158
Query 122 TCCCTGGCGATGACTACCGTCCGTCCGATCGGAAAAACTGGATGGCCGGTCTTACTTTGG 181
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 159 TCCCTGGCGATGACTACCGTCCGTCCGATCGGAAAAACTGGATGGCTGGTCTTACGTTGG 218
Query 182 AGAAACTAACTCTAAACAAGATCGTGTGGCCAGGAACGCATGATTCAGCCACCAACGATA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 AGAAACTAACTCTAAACAAGATCGTGTGGCCAGGAACGCATGATTCAGCCACCAACGATA 278
Query 242 TCGGAATACCTCTGATCTCTCGTCCCTTGGCTGAATGCCAAACGCTCTCTATCTACGAGC 301
||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||
Sbjct 279 TCGGAATACCTCTGATCTCTCGTCCTTTAGCTGAATGCCAATCGCTCTCTATCTACGAGC 338
Query 302 AGCTCGTCCTCGGGACACGTGTCCTCGATATCCGTGTGCAAGAGGATCGCCAAATCTGCC 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 339 AGCTCGTCCTCGGGACACGTGTCCTCGATATCCGTGTGCAAGAGGATCGCCAAATCTGCC 398
Query 362 ACGGGATTCTGACGTCATACGACGTTGATGTGGTCATCGATGACGTTATCAGATTCTTAT 421
|||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |
Sbjct 399 ACGGGATTCTGACGTCATACGAAATTGATGTTGTCATTGATGACGTTATCAGATTCTTGT 458
Query 422 CGGAGACTCACTCGGAGATTGTAATCCTGGAGATTAGGACTGAGTTTGGACACAAAGATC 481
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 459 CGGAGACTCACTCGGAGATTGTAATCCTGGAGATAAGGACTGAGTTTGGACACAAAGATC 518
Query 482 CTCCGGAGTTCGAGACTTACTTGGCAGATAAGTTAGGTCAATTCTTGATACATCAAGATG 541
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 519 CTCCGGGGTTCGAGACTTACTTGGCAGACAAGTTAGGTCAATTCTTGATACATCAAGATG 578
Query 542 ATAACTTGTTCAACAAGCCGGTTTCAGAGATTTTGCCGAAAAGGGTTATTTGCATCTGGA 601
||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 579 ATAGCTTGTTCAACAAGCCGGTATCAGAGATTTTGCCGAAAAGGGTTATATGCATCTGGA 638
Query 602 AACCTAGAGAGTCTCCGAAGCCGAGCCGTGGTGGAATTCTCTGGAACTCAGATTATCTAA 661
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 AACCTAGAGAGTCTCCAAAGCCGAGCCGTGGTGGAATTCTCTGGAACTCAGATTATCTAA 698
Query 662 AAGATAATTGGATCGATACGGATCTTCCATGGACGAAATTTCAGAGCAATTTGAAGCATC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 AAGATAATTGGATCGATACGGATCTTCCATGGACGAAATTTCAGAGCAATTTGAAGCATC 758
Query 722 TGAGTGAGCAGCAACCGATATCTTCTAGAAAATTCTTTTACCGGGTTGAGAACACGGTTA 781
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 759 TGAGTGAGCAGCAGCCGACATCTTCTAGAAAATTCTTTTACCGGGTTGAGAACACGGTCA 818
Query 782 CGCCGCAAGCAGATAATCCAGTTGTGTGGGTTAAACCAGTGACTGATCGGATCCGAAAAC 841
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 819 CGCCGCAAGCAGATAATCCGGTTGTGTGGGTTAAACCGGTGACTGATCGGATCCGAAAAC 878
Query 842 ACGCTAGGCTTTTTATTTCCCAGTGTGTTTCCAAAGGATGTGGAGATAAGTTACAGATTT 901
|||| || || |||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 879 ACGCCAGACTATTTATTTCTCAGTGTGTTTCCAAGGGATGTGGAGATAAGTTGCAGATTT 938
Query 902 TGTCCACTGATTTCATTGAAGGAGATTTTGTCGATGCCTGCGTCGGACTCACTCACGCAA 961
|||||||||||||||| ||||||||||| || |||||||| ||||| || ||||||||||
Sbjct 939 TGTCCACTGATTTCATCGAAGGAGATTTCGTTGATGCCTGTGTCGGCCTTACTCACGCAA 998
Query 962 GAATCGAAGGGAAAG-TTTGATAGAACTATGGAACGA 997
|||||||||| |||| |||||||||||| ||||||||
Sbjct 999 GAATCGAAGG-AAAGGTTTGATAGAACTCTGGAACGA 1034
> AT4G34930.1 | Symbols: | PLC-like phosphodiesterases superfamily
protein | chr4:16637322-16638872 FORWARD LENGTH=1551
Length=1551
Score = 1042 bits (564), Expect = 0.0
Identities = 791/899 (88%), Gaps = 21/899 (2%)
Strand=Plus/Plus
Query 95 ATCTCGAAAAATCCG-ACGGTTCACAA-TTCCCTGGCGATGACTACCGTC-CGTCC-GAT 150
||||| || ||| || | ||||| || |||||||| |||||||||| | || || ||
Sbjct 501 ATCTCCAAGAAT-CGAATGGTTC-GAATTTCCCTGGGGATGACTACC-ACTCG-CCTGAC 556
Query 151 CGGAAAAACTGGATGGCCGGTCT-TACTTTGGAGAAACTAACTCTAAACAAGATCGTGTG 209
||||| |||||||||||| ||| | || |||| |||||||| || ||||||||||||||
Sbjct 557 CGGAAGAACTGGATGGCCCATCTCT-CTGTGGATAAACTAACCCTTAACAAGATCGTGTG 615
Query 210 GCCAGGAACGCATGATTCAGCCACCAAC-G-ATATCGGAATACCTCTGATCTCTCGTCCC 267
||||||||| || || |||||||||||| | || | || | ||| || || |||||
Sbjct 616 GCCAGGAACTCACGACTCAGCCACCAACGGAAT-TGGGGA-CCCTTTGGTCACTCGTTGG 673
Query 268 TTGGCTGAATGCCAAACGCTCTCTATCTACGAGCAGCTCGTCCTCGGGACACGTGTCCTC 327
|||| |||||| ||||||||||| |||| ||| ||||| || || || ||||||||||||
Sbjct 674 TTGGGTGAATGTCAAACGCTCTCCATCTTCGACCAGCTAGTTCTTGGCACACGTGTCCTC 733
Query 328 GATATCCGTGTGCAAGAGGATCGCCAAATCTGCCACGGGA-TTCTGACGTCATACGACGT 386
||||||||| | ||||||||||| ||||||| ||| ||| | || ||| ||||
Sbjct 734 GATATCCGTTTCCAAGAGGATCGTTGTGTCTGCCA-TGGAGCTCTTTCTTCGTACAACGT 792
Query 387 TGATGTGGTCATCGATGACGTTATCAGATTCT-TATCGGAGACTCACTCGGAGATTGTAA 445
|||||| ||| || ||||||| |||||||| | | || ||||| || || ||||| |||
Sbjct 793 TGATGTCGTCCTCAATGACGTCATCAGATT-TGTGTCCGAGACCCAATCTGAGATCATAA 851
Query 446 TCCTGGAGATTAGGACTGAGTTTGGACACAAAGATCCTCCGGAGTTCGAGACTTACTTGG 505
|| ||||||| ||||| ||||||||| | ||||| ||| || ||||||||||||||||
Sbjct 852 TCTTGGAGATAAGGACCGAGTTTGGAAAGAAAGACCCTTTTGAATTCGAGACTTACTTGG 911
Query 506 CAGATAAGTTAGGTCAATTCTTGATACATCAAGATGATAACTTGTTCAACAAGCCGGTTT 565
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 912 TTGATAAATTAGGTCAATTCTTGATACATCAAGACGATAACTTGTTCAACAAGCCGGTAT 971
Query 566 CAGAGATTTTGCCGAAAAGGGTTATTTGCATCTGGAAACCTAGAGAGTCTCCGAAGCCGA 625
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 972 CAGAGATTTTGCCGAAAAGGGTTATTTGCATCTGGAAACCTAGAGAATCTCCGAAGCCGA 1031
Query 626 GCCGTGGTGGAATTCTCTGGAACTCAGATTATCTAAAAGATAATTGGATCGATACGGATC 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 GCCGTGGTGGAATTCTCTGGAACTCAGATTATCTAAAAGATAATTGGATCGATACGGATC 1091
Query 686 TTCCATGGACGAAATTTCAGAGCAATTTGAAGCATCTGAGTGAGCAGCAACCGATATCTT 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TTCCATGGACGAAATTTCAGAGCAATTTGAAGCATCTGAGTGAGCAGCAACCGATATCTT 1151
Query 746 CTAGAAAATTCTTTTACCGGGTTGAGAACACGGTTACGCCGCAAGCAGATAATCCAGTTG 805
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1152 CTAGGAAATTCTTCTACCGGGTTGAGAACACGGTTACGCCGCAAGCAGATAATCCGGTTG 1211
Query 806 TGTGGGTTAAACCAG-TGACTGATCGGATCCGAAAACACGCTAGGCTTTTTATTTCCCAG 864
|||||||||||| || | |||||||||||| |||||||||||||||||||||| || |||
Sbjct 1212 TGTGGGTTAAAC-AGGTTACTGATCGGATCAGAAAACACGCTAGGCTTTTTATATCTCAG 1270
Query 865 TGTGTTTCCAAAGGATGTGGAGATAAGTTACAGATTTTGTCCACTGATTTCATTGAAGGA 924
|||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 TGTGCTTCCAAGGGATATGGAGATAAGTTACAGATTTTGTCCACTGATTTCATTGAAGGA 1330
Query 925 GATTTTGTCGATGCCTGCGTCGGACTCACTCACGCAAGAATCGAAGGGAAAGTTTGATA 983
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1331 GATTTTGTCGATGCCTGCGTCGGACTCACTCACGCAAGAAT-GAAGGGACAGTTTGATA 1388
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49028527472
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5