BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944418 Length=362 Score E Sequences producing significant alignments: (Bits) Value AT4G34790.1 | Symbols: | SAUR-like auxin-responsive protein fa... 523 4e-148 > AT4G34790.1 | Symbols: | SAUR-like auxin-responsive protein family | chr4:16594469-16595153 FORWARD LENGTH=685 Length=685 Score = 523 bits (283), Expect = 4e-148 Identities = 338/363 (93%), Gaps = 9/363 (2%) Strand=Plus/Plus Query 1 GTTGCAAATATAAAGAAGAAG--ATGGGTTTAATGCGGTCGATGCTTCCAAATGCAAAGC 58 ||| |||| ||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct 48 GTTCCAAACATAAATAAGAAGACATGGGTTTAATGAGGTCGATGCTTCCAAATGCAAAGC 107 Query 59 AAATCTTCAAATCACAATCTATGAGAAACAAAAACGGATCATCATCATCATC--CA-CAA 115 ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| || ||| Sbjct 108 AAATCTTCAAATCACAATCTATGAGGAACAAGAACGGATCATCCTCACCATCAACAACAA 167 Query 116 CAAC---TTCAGGGCTTGTTCCGAAAGGTCACGTAGCGGTTTACGTGGGAGAACAAATGG 172 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 168 CAACAACTTCAGGGCTTGTTCCGAAAGGTCACGTAGCGGTTTACGTTGGAGAACAAATGG 227 Query 173 AGAAAAAGAGGTTTGTGGTTCCAATATCATACTTGAACCATCCTTTGTTCCGAGAATTTC 232 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 228 AGAAGAAGAGGTTTGTGGTTCCAATATCATACTTGAACCATCCTTTGTTCAGAGAATTTC 287 Query 233 TTAATCGCGCTGAGGAAGAGTGTGGATTTCATCACTCCATGGGTGGCTTGACGATACCTT 292 ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct 288 TTAATCGCGCTGAGGAAGAATGCGGATTTCATCACTCTATGGGTGGCTTGACGATACCTT 347 Query 293 GTAGAGAAGAGTCGTTTCTTCATCTCATTACTTCTCATCAGCTGCATTGAGGAACGCATG 352 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 348 GTCGAGAAGAGTCGTTTCTTTATCTCATTACTTCTCATCAGCTGCATTGAGGAACGCAT- 406 Query 353 TAA 355 ||| Sbjct 407 TAA 409 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16990499162 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5