BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944501
Length=1510
Score E
Sequences producing significant alignments: (Bits) Value
AT4G34138.1 | Symbols: UGT73B1 | UDP-glucosyl transferase 73B1 ... 2344 0.0
> AT4G34138.1 | Symbols: UGT73B1 | UDP-glucosyl transferase 73B1
| chr4:16348106-16349982 REVERSE LENGTH=1752
Length=1752
Score = 2344 bits (1269), Expect = 0.0
Identities = 1433/1513 (95%), Gaps = 7/1513 (0%)
Strand=Plus/Plus
Query 1 TGATTTTCTCATCAGCCAAACATGGGAACTTCC-GGCAAAGTCTCTAAGCTCCATTTCTT 59
||| ||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||
Sbjct 105 TGA-TTTCTCATCAGTTAAACATGGGAAC-TCCTGTCGAAGTCTCTAAGCTCCATTTCTT 162
Query 60 GCTCTTCCCTTTCATGGCTCATGGCCACATGATACCAACTCTGGACATGGCCAAGCTCTT 119
||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 163 GCTCTTCCCTTTCATGGCTCATGGCCATATGATACCAACTCTAGACATGGCTAAGCTCTT 222
Query 120 CGCCACCAAAGGAGCTAAATCCACTATCCTCACTACACCTCTAAATGCCAAGCTCTTCTT 179
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 223 TGCCACCAAAGGAGCTAAATCCACTATCCTCACTACACCTCTCAATGCCAAGCTCTTCTT 282
Query 180 CGAGAAACCCATCAAATCATTCAACCAAGACAACCCGGGACTCGAAGACATCACCATCCA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 CGAGAAACCCATCAAATCATTCAACCAAGACAACCCGGGACTCGAAGACATCACCATCCA 342
Query 240 GATCCTTCATTTCCCTTGCACTGAGCTTGGTTTGCCTGATGGATGTGAGAATACTGATTT 299
||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 343 GATCCTTAATTTCCCTTGCACAGAGCTTGGTTTGCCTGATGGCTGTGAGAATACTGATTT 402
Query 300 CATCTTCTCGACGCCTGACCTAAACATAGGTGACTTGAATCAAAAGTTTTTACTCGCAAT 359
||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 403 CATCTTCTCCACACCTGACCTAAACGTAGGTGACTTGAGTCAAAAGTTTTTACTCGCAAT 462
Query 360 GAAATATTTCAAAGAGCCACTAGAGAAGCTCCTTGAGACAATGAGACCAGACTGTCTTGT 419
|||||||||| |||||||||||||| ||||||| | ||||||||||||||||||||||||
Sbjct 463 GAAATATTTCGAAGAGCCACTAGAGGAGCTCCTCGTGACAATGAGACCAGACTGTCTTGT 522
Query 420 CGGCAACATGTTCTTCCCTTGGGCCACTAAAGTCGCTGAGAAGTTTGGAGTACCGAGACT 479
||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct 523 CGGTAACATGTTCTTCCCTTGGTCCACTAAAGTTGCTGAGAAGTTCGGAGTACCGAGACT 582
Query 480 TGTGTTCCACGGCACAGGCTTCTTTTCTTTATGTGCTTCTCATTGCATAAGGCTCCCTAA 539
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 583 TGTGTTCCACGGCACAGGCTACTTCTCTTTATGTGCTTCTCATTGCATAAGGCTCCCTAA 642
Query 540 GAATGTAGCTTCAAGTTCTGAGCCCTTTGTGATACCTGATCTCCCGGGAGACATTGTGAT 599
|||||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 643 GAATGTGGCAACAAGTTCTGAGCCCTTTGTGATTCCTGATCTCCCGGGAGACATTTTGAT 702
Query 600 TACAGGGGAGCAGGTCATAGAGAAAGAAGAAGAGTCTGTAGTGGGGAGGTTTATGAAGGA 659
||||| ||| |||||||| |||| |||||||||||||||| ||||||||||||||||||
Sbjct 703 TACAGAGGAACAGGTCATGGAGACAGAAGAAGAGTCTGTAATGGGGAGGTTTATGAAGGC 762
Query 660 AATAAGAGACTCAGAGAGAGATAGCTTTGGTGTGTTGGTGAACAGCTTCTACGAGCTTGA 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 763 AATAAGAGACTCAGAGAGAGATAGCTTTGGCGTGTTGGTGAACAGCTTCTACGAGCTTGA 822
Query 720 ACCGGCTTACTCAGATTATTTCAAGAGTTTTGTGGCGAAAAGGGCGTGGCATATCGGTCC 779
|| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 823 ACAGGCTTACTCAGATTATTTCAAGAGCTTTGTGGCGAAAAGAGCGTGGCATATCGGTCC 882
Query 780 GCTTTCTTTAGGAAATAGAAAGTTCGAGGAGAAAGCAGAAAGAGGCAAAAAAGCAAGCAT 839
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 883 GCTTTCCTTAGGAAATAGAAAGTTCGAGGAGAAAGCAGAAAGAGGCAAAAAGGCAAGCAT 942
Query 840 TGATGAGCATGAATGTTTGAAATGGCTCGATTCCAAGAAATGTGATTCAGTGATTTACAT 899
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 943 TGATGAGCATGAATGTTTGAAATGGCTCGACTCCAAGAAATGTGATTCAGTGATTTACAT 1002
Query 900 GGCCTTCGGAACCATGTCTAGCTTTAATAACGAGCAGCTGATAGAGATTGCAGCTGGGTT 959
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1003 GGCCTTTGGAACCATGTCTAGCTTTAAAAACGAGCAGCTGATAGAGATTGCAGCTGGTTT 1062
Query 960 GGATATGTCAGGTCATGATTTTGTCTGGGTGGTTAACAAAAAAGGCAGCCAAGTTGAGAA 1019
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1063 AGATATGTCAGGACATGATTTTGTCTGGGTGGTTAACAGAAAAGGCAGCCAAGTTGAGAA 1122
Query 1020 GGAAGATTGGTTACCAGAGGGGTTTGAAGAGAAGACGAAGGGAAAAGGATTGATAATCCG 1079
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1123 GGAAGATTGGTTACCAGAGGGGTTTGAAGAGAAGACCAAGGGAAAAGGATTGATAATCCG 1182
Query 1080 TGGGTGGGCGCCACAGGTGCTGATACTAGACCATCAA-GCAATTGGTGGATTTTTGACGC 1138
|||||||||||||| ||||||||||| || || ||| |||||||| |||||||||||||
Sbjct 1183 AGGGTGGGCGCCACAAGTGCTGATACTTGAGCA-CAAAGCAATTGGCGGATTTTTGACGC 1241
Query 1139 ATTGCGGATGGAACTCGCTTCT-AGAAGGCGTGGCTTCGGGCCTGCCAATGGTGACGTGG 1197
|||| |||||||||||| || | |||||| ||||| ||||||||||||||||||| |||
Sbjct 1242 ATTGTGGATGGAACTCG-TTATTAGAAGGGGTGGCAGCGGGCCTGCCAATGGTGACATGG 1300
Query 1198 CCAGTGGGAGCCGAGCAGTTCTACAATGAGAAATTGGTGACACAAGTGTTGAAAACAGGA 1257
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1301 CCCGTGGGAGCCGAGCAGTTCTACAACGAGAAATTGGTGACACAAGTGTTGAAAACAGGA 1360
Query 1258 GTGAGTGTGGGAGTGAAGAAGATGATGCAAGTCGTTGGAGACTTCATTAGCAGAGAGAAA 1317
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1361 GTGAGTGTGGGAGTGAAGAAGATGATGCAAGTAGTTGGAGACTTCATTAGCAGAGAGAAA 1420
Query 1318 GTGGAGAGAGCGGTGAGGGAAGTGATGGTTGGAGAAGAGAGGAGGAAACGGGCCAAGGAG 1377
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1421 GTGGAGGGAGCGGTGAGGGAAGTGATGGTTGGAGAAGAGAGGAGGAAACGGGCCAAGGAG 1480
Query 1378 TTAGCGGAAATGGCGAAAAATGCGGTGAAAGAAGGAGGATCTTCAGATCTAGAGTTAGAT 1437
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1481 TTAGCAGAAATGGCGAAAAATGCGGTGAAAGAAGGAGGATCTTCAGATCTAGAGGTAGAT 1540
Query 1438 AGGTTGATGGAAGAGCTTATGTTGGTTAAATTGCAAAAAGAGAAAGTATAAAGAAATTGA 1497
||||||||||||||||||| ||| |||||| ||||||||||||| |||||||||| ||||
Sbjct 1541 AGGTTGATGGAAGAGCTTACGTTAGTTAAACTGCAAAAAGAGAAGGTATAAAGAAGTTGA 1600
Query 1498 ATGTATTGCAAGT 1510
|||||||||||||
Sbjct 1601 ATGTATTGCAAGT 1613
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74497608780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5