BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg944622
Length=1110
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33110.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1738 0.0
AT4G33120.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1679 0.0
> AT4G33110.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:15972323-15974613
REVERSE LENGTH=1324
Length=1324
Score = 1738 bits (941), Expect = 0.0
Identities = 1045/1095 (95%), Gaps = 8/1095 (1%)
Strand=Plus/Plus
Query 22 gaTGGAGAAGATTATTGACGTAGCTTATGGCGCATCAGTGAAGGCGGTTTTGACGTTGTT 81
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 82 GATGGAGAAGATTATTGACGTAGCTTATGGCGCATCAGTGAAGGTGGGTTTGACGTTGTT 141
Query 82 GGAGAAGAATCTGTTGCCGGATCTTGTCATTAGGCGGCTCACACGTCTGCTTCTGGCCGG 141
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 142 GGAGATGAATCTGTTGCCGGATATTGTCATTAGGCGGCTCACACGTCTGCTTCTGGCCGG 201
Query 142 TCGTCTCCGTTCCGGTTACAAACCCACGGCGGAGATGCAACTCTCCGATCTCCTCGGTTT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 202 TCGTCTCCGTTCCGGTTACAAACCCACGGCGGAGATGCAACTCTCCGATCTCCTCCGTTT 261
Query 202 TGTTGAATCTATAAAGAAGATGCCTATAGCTATCAATACCGAGAAGCCAAAGACTCAACA 261
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 262 TGTTGACTCTATAAAGAAGATGCCTATAGCTATCCATACCGAGAAGCCAAAGACTCAACA 321
Query 262 CTATGAATTACCAACAGCTTTCTTCGAACTTGTTCTTGGAAGAAACATGAAATACAGCTC 321
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 322 CTATGAATTACCGACAGCTTTCTTCGAACTTGTCCTTGGAAGAAACATGAAGTACAGCTC 381
Query 322 TTGTTACTTCTCAAACGATTCAACTAGCTTAGAAGATGCAGAGGAAGCTATTTTGGCTCT 381
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 382 TTGTTACTTCTCAAACGATTCAAGTAGCTTAGAAGATGCAGAGGAAGCAATTTTGGCTCT 441
Query 382 TTATTGTGAAAGAGCTAAAGTGGAAGATGGACAAAGTGTTCTTGATGTCGGATGTGGCTG 441
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 442 TTATTGTGAAAGAGCTAAAGTGGAAGATGGTCAAAGTGTTCTTGATATCGGATGTGGCTG 501
Query 442 GGGATCTTTGTCTTTGTACATTGCCCGCAAGTACAGCAAATGCAAGTTAACCGGTATTTG 501
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 502 GGGATCCTTGTCTTTGTACATTGCACGCAAGTACAGCAAATGCAAGTTAACCGGTATCTG 561
Query 502 CAACTCAAAAACACAGAAAGCATTTATCGATGAGAAATGCCGGAAACTCGGGCTTCAGAA 561
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 562 CAACTCCAAAACGCAGAAAGCATTTATCGATGAGAAATGCCGGAAACTCGGGCTTCAGAA 621
Query 562 TATCGAAATTATTGTTGCGGATATTAGCACTTTTGAGCATGAAAGGACATACGATC-GAG 620
||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 622 TATCGAAATCATTGTCGCGGATATTAGCACTTTTGAGCATGAAGGGACATACGATCGGA- 680
Query 621 TATTCTCCATCGAAATGTTCGAGCACATGAAAAACTACGGAGAGCTACTGAAGAAGATAG 680
||||||||||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct 681 TATTCTCCATCGAGATGTTTGAGCATATGAAAAACTATGGAGAGCTACTAAAGAAGATAG 740
Query 681 GAAAGTGGATGAAGGAAGATAGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAAGTGGATGAAGGAAGATAGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTTG 800
Query 741 CTTACCACTTTGAGGATGTGAATGACGATGACTGGATCACACGACACTTTTTCAGCGGAG 800
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 801 CTTACCACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAGCGGAG 860
Query 801 GAACAATGCCATCAGCCA-ATCTTCTCCTATATTTCCAAGAAAATGTTTCGATTGTGGAT 859
|||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||
Sbjct 861 GAACAATGCCATCAGC-AGATCTTCTGCTATATTTTCAAGAAAATGTTTCGATTGTGGAT 919
Query 860 CATTGGCTCATAAACGGGAAGCATTATGCAAAGACAAGTGAAGAGTGGCTCAAAAGAATG 919
||||||||| ||| ||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct 920 CATTGGCTCGTAAGCGGGACGCATTATGCAAAAACAAGTGAAGAGTGGCTAAAAAGAATG 979
Query 920 GATAAGGAGATAGTTGCAATAAAAGAGATAATGGAAGTGACATATGGGAAAGAAGAAGCA 979
|||||||||||||||||| ||||| | || ||||||||||| ||||||||||||||||||
Sbjct 980 GATAAGGAGATAGTTGCAGTAAAAAAAATCATGGAAGTGACTTATGGGAAAGAAGAAGCA 1039
Query 980 GTGAAGTGGATGGTTTACTGGAGAACCTTCTTCATCGCAGTTGCTGAGCTTTTCGGATAC 1039
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1040 GTGAAGTGGATGGTTTACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTCGGATAC 1099
Query 1040 AACAATGGAGAAGAGTGGATGGTTGCACACTTCCTCTTCAAGAAGAAATGATGAT--TT- 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1100 AACAATGGAGAAGAGTGGATGGTTGCACACTTCCTCTTCAAGAAGAAATGATGATGATTT 1159
Query 1097 CTTTATTTT-CTTCC 1110
||||||||| |||||
Sbjct 1160 CTTTATTTTTCTTCC 1174
> AT4G33120.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:15975386-15978111
REVERSE LENGTH=1315
Length=1315
Score = 1679 bits (909), Expect = 0.0
Identities = 1034/1094 (95%), Gaps = 9/1094 (1%)
Strand=Plus/Plus
Query 22 gaTGGAGAAGATTATTGACGTAGCTTATGGCGCATCAGTGAAGGCGGTTTTGACGTTGTT 81
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 56 GATGGAGAAGATTATTGACGTAGCTTATGGTGCATCAGTGAAGGCGGGTTTGACGTTGTT 115
Query 82 GGAGAAGAATCTGTTGCCGGATCTTGTCATTAGGCGGCTCACACGTCTGCTTCTGGCCGG 141
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct 116 GGAGAAGAATCTGTTGCCGGATCTTGTCATTAGGCGGCTCATACGTCTGCTTTTGGCCAG 175
Query 142 TCGTCTCCGTTCCGGTTACAAACCCACGGCGGAGATGCAACTCTCCGATCTCCTCGGTTT 201
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 176 TCGTCTCCGTTCCGTTTACAAACCCACGGCGGAGATGCAACTCTCCGATCTCCTCCGTTT 235
Query 202 TGTTGAATCTATAAAGAAGATGCCTATAGCTATCAATACCGAGAAGCCAAAGACTCAACA 261
|||||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 236 TGTTGACTCTCTAAAGAAGATGCCTATAGCTATCAATACCGAGACGGCAAAGACTCAACA 295
Query 262 CTATGAATTACCAACAGCTTTCTTCGAACTTGTTCTTGGAAGAAACATGAAATACAGCTC 321
||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||
Sbjct 296 CTATGAATTACCAACAGCTTTCTTCGAACATGCTCTTGGAAGAAACATCAAATACAGCTG 355
Query 322 TTGTTACT-TCTCAAACGATTCAACTAGCTTAGAAGATGCAGAGGAAGCTATTTTGGCTC 380
|||||||| | ||||||||||||| |||||||||||| |||| ||||||||| |||||||
Sbjct 356 TTGTTACTAT-TCAAACGATTCAAGTAGCTTAGAAGAGGCAGGGGAAGCTATGTTGGCTC 414
Query 381 TTTATTGTGAAAGAGCTAAAGTGGAAGATGGACAAAGTGTTCTTGATGTCGGATGTGGCT 440
||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 415 TTTCTTGTGAAAGAGCTAAAGTGGAAGATGGTCAAAGTGTTCTTGATATCGGATGTGGCT 474
Query 441 GGGGATCTTTGTCTTTGTACATTGCCCGCAAGTACAGCAAATGCAAGTTAACCGGTATTT 500
||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 475 GGGGATCTTTGACTTTGTACATTGCACGCAAGTACAGCAAATGCAAGTTAACCGGTATCT 534
Query 501 GCAACTCAAAAACACAGAAAGCATTTATCGATGAGAAATGCCGGAAACTCGGGCTTCAGA 560
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 GCAACTCCAAAACGCAGAAAGCATTTATCGATGAGAAATGCCGGAAACTCGGGCTTCAGA 594
Query 561 ATATCGAAATTATTGTTGCGGATATTAGCACTTTTGAGCATGAAAGGACATACGATCG-A 619
|| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 595 ATGTCGAAATCATTGCTGCGGATATTAGCACTTTTGAGCATGAAGGGACATACGATCGGA 654
Query 620 GTATTCTCCATCGAAATGTTCGAGCACATGAAAAACTACGGAGAGCTACTGAAGAAGATA 679
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 655 -TATTCTCCATCGAAATGTTCGAGCATATGAAAAACTATGGAGAGCTACTGAAGAAGATA 713
Query 680 GGAAAGTGGATGAAGGAAGATAGTCTTCTGTTTGTTCACTATTTCTGCCATAAGACATTT 739
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 714 GGAAACTGGATGAAGGAAGATAGTCTTCTGTTTGTTCACTATCTCTGCCATAAGACATAT 773
Query 740 GCTTACCACTTTGAGGATGTGAATGACGATGACTGGATCACACGACACTTTTTCAGCGGA 799
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 774 GCTTACCACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAGCGGA 833
Query 800 GGAACAATGCCATCAGCCA-ATCTTCTCCTATATTTCCAAGAAAATGTTTCGATTGTGGA 858
||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||
Sbjct 834 GGAACAATGCCATCAGC-AGATCTTCTCCTATATTTCCAAGAAAATGTTTCGATTATGGA 892
Query 859 TCATTGGCTCATAAACGGGAAGCATTATGCAAAGACAAGTGAAGAGTGGCTCAAAAGAAT 918
|||||||||| | ||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct 893 TCATTGGCTCGTTAACGGGACGCATTATGCAAAGACAAGTGAAGAGTGGCTGAAAGGAAT 952
Query 919 GGATAAGGAGATAGTTGCAATAAAAGAGATAATGGAAGTGACATATGGGAAAGAAGAAGC 978
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 953 GGATAAGGAGATAGTTGCCGTAAAAGAGATAATGGAAGTGACTTATGGGAAAGAAGAAGC 1012
Query 979 AGTGAAGTGGATGGTTTACTGGAGAACCTTCTTCATCGCAG-TTGCTGAGCTTTTCGGAT 1037
||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||
Sbjct 1013 AGTGAAGTGGACGGTTTACTGGAGAACCTTCTTCATCGC-GCTTGCTGAGCTTTTCGCAT 1071
Query 1038 ACAACAATGGAGAAGAGTGGATGGTTGCACACTTCCTCTTCAAGAAGAAATGATGATTTC 1097
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1072 ACAACAATGGAGACGAGTGGATGATTGCACACTTCCTCTTCAAGAAGAAATGATGATTTC 1131
Query 1098 TTTATTTTC-TTCC 1110
||||||||| ||||
Sbjct 1132 TTTATTTTCCTTCC 1145
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54417390780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5