BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg944690

Length=298
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G25030.1 | Symbols:  | pseudogene, HSP100/ClpB, putative, si...  52.8    2e-06


> AT2G25030.1 | Symbols:  | pseudogene, HSP100/ClpB, putative, 
similar to HSP100/ClpB GI:9651530 (Phaseolus lunatus); blastp 
match of 77% identity and 3.4e-113 P-value to GP|9651530|gb|AAF91178.1|AF203700_1|AF203700 
ClpB {Phaseolus lunatus} | 
chr2:10648663-10650450 FORWARD LENGTH=1788
Length=1788

 Score = 52.8 bits (28),  Expect = 2e-06
 Identities = 28/28 (100%), Gaps = 0/28 (0%)
 Strand=Plus/Plus

Query  271  GCCCATGAAGCAAGGGCTTTAGGCATCA  298
            ||||||||||||||||||||||||||||
Sbjct  589  GCCCATGAAGCAAGGGCTTTAGGCATCA  616



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13773363226


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5