BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944795 Length=343 Score E Sequences producing significant alignments: (Bits) Value AT4G31830.1 | Symbols: | unknown protein; Has 42 Blast hits to... 523 4e-148 > AT4G31830.1 | Symbols: | unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:15400604-15401147 REVERSE LENGTH=544 Length=544 Score = 523 bits (283), Expect = 4e-148 Identities = 319/337 (95%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 5 TGAAGAAAGCATAAGCATGGCTGGAGAAGATGACTGGAGGAAAACGGCAGATACGACAAA 64 ||||||| ||||||||||||| |||||||| |||||||| ||||| ||||||||||| || Sbjct 27 TGAAGAAGGCATAAGCATGGCCGGAGAAGAAGACTGGAGAAAAACAGCAGATACGACGAA 86 Query 65 GATGAGCTCGGAGGGAGTGAAAGCAGCCGGCGTTGAGTCATCCAAGAGGCCGCCAGGAAG 124 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 87 GATGAGCTCGGAGGGAGTAAAAGCTGCCGGCGTTGAGTCATCAAAGAGGCCGCCAGGAAG 146 Query 125 TAATCCAGGTGGTGTTCTTCACCAACGCCGTAACTTGCCATACAGTTACACCACGATGGC 184 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 147 TAATCCAGGTGGTGTTCTTCATCAACGCCGTAACTTGCCATACAGTTACACGACGATGGC 206 Query 185 TCTAGCCGGATTAGCTATCTCTGGTGCCATCATGTACACTGTAATGTATGCTAAGAAAAA 244 ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||| || Sbjct 207 TCTAGCCGGATTAGCTATCTCGGGGGCCATCATGTACACTGTTATGTATGCTAAGAAGAA 266 Query 245 GCCGGAAGCTACTGCCACTGATGTAGCTAAGGCTGCCACAGGGACAGCTAAACCCGAAGA 304 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 267 GCCGGAAGCCACTGCCACTGATGTAGCTAAGGCTGCCACAGGGACGGCTAAACCTGAAGA 326 Query 305 TACACATCCAAGAAAGTAAAATTTCAAGGGAAGAATT 341 ||||||||||||||||||||||||||||||||||||| Sbjct 327 TACACATCCAAGAAAGTAAAATTTCAAGGGAAGAATT 363 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16035411931 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5