BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944895 Length=1003 Score E Sequences producing significant alignments: (Bits) Value AT4G30900.1 | Symbols: | DNAse I-like superfamily protein | ch... 1598 0.0 > AT4G30900.1 | Symbols: | DNAse I-like superfamily protein | chr4:15039432-15042311 FORWARD LENGTH=1445 Length=1445 Score = 1598 bits (865), Expect = 0.0 Identities = 961/1005 (96%), Gaps = 15/1005 (1%) Strand=Plus/Plus Query 1 AAGAAG-AAGGAGACAAAACAATGAGTGTGTCTTTGAGTGTGATGTCATTCAATCTTCAC 59 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 AAGAAGAAAGGAGACAAAACAATGAGTGTGTCTTTGAGTGTGATGTCATTCAATCTTCAC 425 Query 60 GATGATCAACCTGAAGAAAGCCCTAATTCATGGCTCAAAAGGAAGGATTTATGTCTCACT 119 ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 426 GATGATCTACCTGAAGAAAGCCCTAATTCATGGCTCAAAAGGAAAGATTTGTGTCTCACT 485 Query 120 GTCATCACCAGTTACTCCCCCATTGTTCTCTGTACCCAACAAGGTGTGAAGTCTCAATTG 179 |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 486 GTCATCACTAGTTACTCCCCCATTGTTCTCTGTACCCAACAAGGTGTGAAGTCGCAGTTG 545 Query 180 GATTATCTTCAGCAGGGGTTGCCAGCCTATGATCAATTTGGCATATCAAGAAAAGGACCT 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 546 GATTATCTTCAGCAGGGGTTGCCAGCCTATGATCAATTTGGCATATCAAGAACAGGACCT 605 Query 240 CAGGATGCTAATGATGAACACTGCACCATCTTCTTCAACAAGGAAAAAGTAGAGCTGCTA 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 606 GGGGATGCTAATGATGAACACTGCACCATCTTCTTCAACAAGGAAAAAGTAGAGCTGCTA 665 Query 300 GAGGGTGGAACTTTTTGGCTGTCGGAGTCTCCCTCGGTCCCTGGAAGCACAGCATGGGGT 359 |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct 666 GAGGGTGGAACTTTTTGGTTGTCAGAGTCTCCCTCGGTCCCTGGAAGCACGGCATGGGGT 725 Query 360 TCCGCAGTTCCTTGTATAGCGACATGGTTTACGACTGCCTACACATTCCAA-TTGAAAGG 418 ||||||||||||||||||||||||| | | | || ||||||||| || ||||| Sbjct 726 TCCGCAGTTCCTTGTATAGCGACAT-G-----G---G-CT--ACATTCCAACTT-AAAGG 772 Query 419 AGCGGAGCCACCGGGATTTTCGTTCCAGATAGTCAACACAAACTTGGATGAAATCAGCCC 478 ||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 773 AGCGGAGCCGCCTGGTTTTTCGTTTCAGATAGTCAACACAAACTTGGATGAAATCAGCCC 832 Query 479 TCGTGCCCGTAGGCGAAGTGCTTTACTCACATGGCAACACATAGCATCATTACCTCCCAC 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 TCGTGCCCGTAGGCGAAGTGCTTTACTCACATGGCAACACATAGCATCATTACCTCCCAC 892 Query 539 TTTGCCGGTTGTGTACTGTGGAGGATTCAACACACAGAAGGAATCAACAACAGGGCGATT 598 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 893 TTTGCCGGTTGTGTACTGTGGAGGATTCAACACACAGAAGGAATCAACAACAGGGCGGTT 952 Query 599 TCTGTTGGGCAGATCTAGAGAGCACGGTGTGGTAGGGGACATGAGAGACGCATGGCCAAG 658 |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 953 TCTGTTGGGCAGATCTAGAGAGCATGGTGTGGTAGGAGATATGAGAGACGCATGGCCAAG 1012 Query 659 TGCCCGAGTAAGAAAAAACGTCGCTCTCATAAGAACATACCATGATTTCAAAGGTGACAA 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 TGCCCGAGTAAGAAAAAACGTCGCTCTCATAAGAACATACCATGATTTCAAAGGTGACAA 1072 Query 719 GCAGGGAACTGTCGAGTTCTTGAAGCTGATATTCAGAGCGTTATGCCTCTGTTGGGACCG 778 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 1073 GCAGGGAACGGTCGAGTTCCTGAAGCTGATATTCAGAGCGTTATGCCTCTGCTGGGACCG 1132 Query 779 ACAGACACAAGATCTACATACAGATTGGATACTTTACAGAGGTAGATCTATAGTTCCTGT 838 |||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1133 ACAGACGCAAGATCTACACACGGATTGGATACTTTACAGAGGTAGATCTATAGTTCCTGT 1192 Query 839 AATGTGCGAGATCGTAAATGATAAGATTGACGACTTATATCCTTCATCTCACTACCCTGT 898 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1193 AATGTGCGAGATCGTAAATGATAAGATTGACGACTTGTATCCTTCATCTCACTACCCTGT 1252 Query 899 GTTTGCTGAGTTTATGCTTCCTCGTTCTGTAAGAATGCTTGAACCTACTCCTCCTGTTTC 958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1253 GTTTGCTGAGTTTATGCTTCCTCGTTCTGTAAGAATGCTTGAACCTACTCCTCCTGTTTC 1312 Query 959 TGCTCCTGCTCAAGCGGAAAGCTAGAACACATGTCCTCTCTTGCT 1003 |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1313 TGCTCCTGCTCAAGAGGAAAGCTAGAACACATGTCCTCACTTGCT 1357 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49128995766 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5