BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg944939 Length=979 Score E Sequences producing significant alignments: (Bits) Value AT4G30510.1 | Symbols: ATATG18B, ATG18B, G18B | homolog of yeas... 1609 0.0 > AT4G30510.1 | Symbols: ATATG18B, ATG18B, G18B | homolog of yeast autophagy 18 (ATG18) B | chr4:14905137-14907591 REVERSE LENGTH=1261 Length=1261 Score = 1609 bits (871), Expect = 0.0 Identities = 943/979 (96%), Gaps = 0/979 (0%) Strand=Plus/Plus Query 1 GAGCTTTTGTTATTGTTGAGATGTTGTATAGCTCAGATCTACTTGCCATTGTTGGTGCTG 60 |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 141 GAGCCTTTGTTATTGTTGAGATGTTGTATAGCTCAGATCTACTTGCAATTGTTGGAGCTG 200 Query 61 GTGAACAGGCTTCTCTATCCCCACGGCGTCTTTGTTTGTTCAAGACCACAACGGGTTTAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 GTGAACAGGCTTCTCTATCCCCACGGCGTCTTTGTTTGTTCAAGACCACAACGGGTTTAC 260 Query 121 CTCTTAGGGAATTGAACTTTTTAACTTCTATACTCGCTGTCCGTATGAACAAGAAAAGAC 180 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 261 CTCTTAGGGAATTGAATTTTTTAACTTCTATACTCGCTGTTCGTATGAACAAGAAAAGAC 320 Query 181 TTGTTGTTGTGCTGCTAGAGAAAACATTCGTTTACGACTTGAATACTCTTGTCATGCTTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 321 TTGTTGTTGTGCTGCTAGAGAAAACATTCGTTTACGACTTGAATACTCTTGTCATGCTTG 380 Query 241 ATACTATCTATACCGTGCCAAATCCTAAAGGTCTATCTGCATTCTCTCCATCTCTTGAAG 300 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 381 ATACTATCGACACCGTGCCAAATCCAAAAGGTCTATCTGCATTCTCTCCATCTCTTGAAG 440 Query 301 GCTGCTACTTAGCTGTTCCAGCTAGTGCGACGAAAGGGTCGGTTTTGGTGTATAACGTCA 360 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct 441 GCTGCTACTTAGCTGTTCCAGCTAGTACGACGAAAGGATCTGTTTTGGTGTATAACGTCA 500 Query 361 TGGATTTGCAGTCTCATAGTGAGATAGATGCACATCGTTCTCCATTGGCTGCGATTGCAC 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 501 TGGATTTGCAGTCTCATAGTGAGATTGATGCACATCGTTCTCCATTGGCTGCGATTGCAC 560 Query 421 TCTCATCAAATGGAATGTACATTGCTACAGCTTCTGAGCAAGGAACCTTGATCCGAGTCC 480 | || ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 561 TGTCTTCAAATGGAATGTACATTGCTACAGGATCTGAGCAAGGAACCTTGATCCGAGTCC 620 Query 481 ATCTTGTTTCGGAAGCAACTAAGTCATATAGTTTCAGGAGAGGAACATACCCATCTACTA 540 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 ATCTTGTTTCAGAAGCAACTAAGTCATATAGTTTCAGGAGAGGAACATACCCATCTACTA 680 Query 541 TATACTCACTGTCTTTTGGACCATCGACACAGCTTCCGGATATATTAATTGCAACGAGTT 600 |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 681 TATATTCACTGTCTTTTGGACCATCGACACAGCTTCCAGATATATTAATTGCAACTAGTT 740 Query 601 CTTCAGGCTCCATTCATGCCTTCTCTTTAAGTTTGGCCATAAACCAAAGAAGCAAAAGGT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 741 CTTCAGGCTCCATTCATGCCTTCTCTTTAAGTTTGGCCATAAACCAAAGAAGCAAAAGGT 800 Query 661 CTACCAGCTTTCTTGGATCAGTTCTTCCGGACAGCGTGAGTGATGCACTAGATCCAGCTC 720 |||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct 801 CTACTAGCTTTCTTGGATCGGTTCTTCCCGACAGTGTGAGTGATGCACTAGATCCAGCTC 860 Query 721 ATCATCATGTGCTTCAAAACGCAGTTTCTTCCGGGATTAGAAGTTATGCAGTGGTTAGGA 780 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 861 ATCATCATGTGCTTCAAAACGCAGTTTCTTCCGGGATTAGAAGTTATGCCGTGGTTAGGA 920 Query 781 AGATAGACAAACTTGAAGGAACATCATCTCCATCTCAGTTTACATCTCTTAGAGCAACGG 840 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 921 AGATAGACAAACTTGAAGGAACATCATCTCCATCTCATTTTACATCTCTTAGAGCAACGG 980 Query 841 TATCGGTGATTACTTATAACGGGTATTTCCAGGAGTATACGCTAAGTATCAATAACAAGA 900 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 981 TATCGGTGATCACTTATAACGGATATTTCCAGGAGTATACGCTAAGTATCAATAACAAGA 1040 Query 901 ATGAGTCTTTATGGACAATGGAACGTGAATTCAACCTCTTCTCAATAACAACCGGGTGAT 960 |||||||| |||||||| |||||||||||||||| |||||||| ||||| |||||||||| Sbjct 1041 ATGAGTCTCTATGGACACTGGAACGTGAATTCAATCTCTTCTCCATAACCACCGGGTGAT 1100 Query 961 GTATAAAATCAAATACCAA 979 ||||| || |||||| ||| Sbjct 1101 GTATACAACCAAATATCAA 1119 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47923376238 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5