BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945001
Length=1683
Score E
Sequences producing significant alignments: (Bits) Value
AT4G30000.2 | Symbols: | Dihydropterin pyrophosphokinase / Dih... 2532 0.0
AT1G69190.1 | Symbols: | Dihydropterin pyrophosphokinase / Dih... 1295 0.0
> AT4G30000.2 | Symbols: | Dihydropterin pyrophosphokinase / Dihydropteroate
synthase | chr4:14670156-14672463 REVERSE LENGTH=2013
Length=2013
Score = 2532 bits (1371), Expect = 0.0
Identities = 1559/1646 (95%), Gaps = 28/1646 (2%)
Strand=Plus/Plus
Query 2 CTCTACTTTCTCTTTCCAAAGATGGCTCGTTTGCTGTCACAATA-TTTAATCCACACCGG 60
||||||||||| ||||| |||||||||| ||||||||||||| | ||||| ||||||||
Sbjct 46 CTCTACTTTCTATTTCCCAAGATGGCTCCTTTGCTGTCACAA-ACCTTAATACACACCGG 104
Query 61 AAGATTCCTTCTCCGCCGCTTCTCAGAACCACCTCCGGCGGTAA---------T--C-GC 108
|||||||||||||| ||||||| ||||||||||||||| |||| | | ||
Sbjct 105 CAGATTCCTTCTCCGTCGCTTCTTAGAACCACCTCCGGCAGTAATCTCTGCTGTGGCTGC 164
Query 109 GA------------TCCACCGATACTATTCGTCGAAGTCTCTTTCTCT-GATGTCTCCAC 155
|| |||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct 165 GAGTCGCGTCTGCTTCCATCGATACTATTCGTCGAAGTCTCTTTCTCTCG-TGTCTCCAC 223
Query 156 TTGGCTTGCACTGTTCCTCTTTATCCAGTCCTCCAGCATTATGTAACTCAGCTTTCTCAT 215
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 224 TTGGCTTGCACTGTTCCTCTTTATTCAGTCCTCCAGCATTATGTAACTCAGCTTTCTCAT 283
Query 216 CTTCGGCAACAAGTACAACTGTTGAAGTTCAATCTACGGAGCATGAAGTTGTGATTGCTT 275
|||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||
Sbjct 284 CTTCGGCAACAAGTACAACTATCGAAGTACAATCTACAGAGCATGAAGTTGTGATTGCTT 343
Query 276 TAGGAAGTAACATTGGAAACCGGATGAATAATTTCAGAGAAGCTTTGCGATTGATGAAGC 335
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 344 TAGGAAGTAACATTGGAAACCGGATGAATAATTTCAGAGAGGCTTTGCGATTGATGAAGC 403
Query 336 GTGGTGGCATTTGTGTAACCAGGCACAGTTGTTTATACGAAACGGCTCCTGTTCATGTGA 395
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 404 GTGGTGGCATTTGTGTAACCAGGCACAGTTGTTTGTACGAAACGGCTCCGGTTCATGTGA 463
Query 396 CTGACCAACCCAGGTTTCTCAATGCTGCAGTGAGAGGTGTTACTAAGCTTGGACCTCATG 455
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 464 CTGACCAACCCAGGTTTCTCAATGCTGCAGTGAGAGGTGTCACTAAGCTTGGACCTCATG 523
Query 456 AACTATTGAGTGTTCTCAAGACTATTGAGAAAGACATGGGACGTGAGGATGGTATTCGGT 515
| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||
Sbjct 524 AGCTATTAAGTGTTCTCAAGACTATTGAGAGAGACATGGGACGTAAGGATGGTATTAGGT 583
Query 516 ATGGACCAAGACCACTTGATTTGGACATATTGTTCTACGGCAAGATGAGAATAAGTTCTG 575
||||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||
Sbjct 584 ATGGACCAAGACCGCTTGACTTGGACATATTGTTCTATGGGAAGATGAGAATTAGTTCTG 643
Query 576 ATAAGCTGATCATACCACATGAGAGACTCTGGGAGAGGTCATTTGTGTTAGCACCTTTGG 635
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 644 ATAAGCTGATCATACCACATGAGAGACTCTGGGAAAGGTCATTTGTGTTAGCACCTTTGG 703
Query 636 TTGATTTGCTTGGATCAGCTGTTGATAATGATACAGTTGCTCATTGGCATTCGCTCGCGA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 TTGATTTGCTTGGATCAGCTGTTGATAATGATACAGTTGCTCATTGGCATTCGCTCGCGA 763
Query 696 TACATCCTGGTGGAATTTTCCAAGCGTGGGAGAGACTGGGTGGCGAATCACTGATTGGAC 755
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 764 TACATCCTGGTGGAATTTTCCAAGCGTGGGAGAGACTGGGTGGCGAGTCACTGATTGGAC 823
Query 756 AAGATGGTATACAAAGGGTTTTACCAATAGGAGATAAGCTGTGGGATTTTTCTAACAAAA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 AAGATGGTATACAAAGGGTTTTACCAATAGGAGATAAGCTGTGGGATTTTTCTAACAAAA 883
Query 816 CTCATGTAATGGGTATACTTAATCTTACTCCCGACAGCTTTAGCGATGGAGGGCAATTTC 875
||||||| |||||||||||||||||||| || ||||||||||| ||||||||| ||||||
Sbjct 884 CTCATGTGATGGGTATACTTAATCTTACACCTGACAGCTTTAGTGATGGAGGGAAATTTC 943
Query 876 AATCAATAGATTCTGCAGTTTCTCGGGTTCGCTCAATGATCTCTGATGGTGCAGATATAA 935
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 944 AATCAATAGATTCTGCAGTTTCTCGGGTTCGCTCAATGATCTCTGAGGGTGCAGATATAA 1003
Query 936 TTGATATTGGAGCACAGTCCACACGCCCAATGGCCTCAAGAATTTCTAGTCAAGAAGAGT 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1004 TTGATATTGGAGCACAGTCCACACGCCCAATGGCCTCAAGAATTTCTAGTCAAGAAGAGT 1063
Query 996 TAGATAGACTACTACCAGTTTTAGAGGCTGTTCGTGGTATGCCAGAGATGGAGGAAAAGC 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064 TAGATAGACTACTACCAGTTTTAGAGGCTGTTCGTGGTATGCCAGAGATGGAGGAAAAGC 1123
Query 1056 TCATATCCGTGGACACTTTCAACTCTGAGGTTGCTTCAGAAGCAATAAGCAATGGAGCTG 1115
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124 TCATATCTGTGGACACTTTCAACTCTGAGGTTGCTTCAGAAGCAATAAGCAATGGAGCTG 1183
Query 1116 ACATTCTAAATGATGTATCTGCGGGAACCTTAGACCCGAATATGCATGAGGTTGTTGCAG 1175
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1184 ACATTCTAAATGATGTATCTGCGGGAACCTTAGACCCGAATATGCATAAGGTTGTTGCAG 1243
Query 1176 AATCTGGGGTTCCTTACATGGCCATGCACATGAGAGGAGATCCATGTACAATGCAGAACA 1235
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1244 AATCTGGGGTTCCTTATATGGCCATGCACATGAGAGGAGATCCATGTACAATGCAGAACA 1303
Query 1236 AAGAGAATTTGCAGTACGATGATATCTGCAAGGATGTTGCTTCTGAACTCTACTTGAGAG 1295
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1304 AAGAGAATTTGCAGTATGATGATGTCTGCAAGGATGTTGCTTCTGAACTCTACTTGAGAG 1363
Query 1296 TGAGAGATGCGGAACTCTCTGGGATTCCAGCTTGGAGGGTTATGATCGATCCAGGGATTG 1355
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 TAAGAGATGCAGAACTCTCTGGGATTCCAGCTTGGAGGGTTATGATCGATCCAGGGATTG 1423
Query 1356 GGTTTTCCAAGAATGTAGATCATAATCTAGATATTATTATGGATCTGCCAAAAATCCGAG 1415
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1424 GGTTTTCCAAGAGCGTAGATCATAATCTAGATATTATTATGGATCTTCCAAAAATCCGAG 1483
Query 1416 AAGAGATGGCTAAGAGAAGTATAGCAGTGTCTCATGCGCCTATACTCATAGGACCTTCAA 1475
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 1484 AAGAGATGGCTAAGAGAAGTATAGCAGTTTCTCATGCGCCTATACTCGTAGGACCTTCAA 1543
Query 1476 GGAAGAGGTTTCTGGGAGATATTTGTGGGCGTCCTGAGGCCACTGACAGAGATGCTGCAA 1535
|||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1544 GGAAAAGATTTCTGGGAGATATTTGTGGGCGACCTGAGGCCACTGACAGAGATGCTGCAA 1603
Query 1536 CTGTTGCTTCAGTTACTGCAGGCATTTTAGGAGGTGCCAATATCATTAGAGTTCATGATG 1595
|||||||||| || |||||||||||| ||||||||||||||||||| ||||||||| |||
Sbjct 1604 CTGTTGCTTCTGTCACTGCAGGCATTCTAGGAGGTGCCAATATCATCAGAGTTCATAATG 1663
Query 1596 TTAGACATAACGCAGACGCAGCTAAA 1621
||||||||||||| |||||||| |||
Sbjct 1664 TTAGACATAACGCCGACGCAGCAAAA 1689
> AT1G69190.1 | Symbols: | Dihydropterin pyrophosphokinase / Dihydropteroate
synthase | chr1:26013012-26014834 REVERSE LENGTH=1699
Length=1699
Score = 1295 bits (701), Expect = 0.0
Identities = 1190/1424 (84%), Gaps = 42/1424 (3%)
Strand=Plus/Plus
Query 260 GAAGTTGTGATTGCTTTAGGAAGTAACATTGGAAACCGGATGAATAATTTCAGAGAAGCT 319
||||| ||||| ||||| ||||| || |||||||| | ||||||||||||| |||||||
Sbjct 162 GAAGTCGTGATAGCTTTGGGAAGCAATGTTGGAAACAGAATGAATAATTTCAAAGAAGCT 221
Query 320 TTGCGATTGATG-AAG-CGTGGTGGCATTTGTGTAACCAGGCACAGTTGTTTATACGAAA 377
|| ||||||||| ||| | | ||| || |||||||||| ||||||||||| |||||||
Sbjct 222 TTACGATTGATGAAAGAC-T-ATGGGATCAGTGTAACCAGACACAGTTGTTTGTACGAAA 279
Query 378 CGGCTCCTGTTCATGTGACTGACCAACCCAGGTTTCTCAATGCTGCAGTGAGAGGTGTTA 437
| | |||||||||||||| |||||||| || |||||||| |||||| | |||||||| |
Sbjct 280 CAGAACCTGTTCATGTGACCGACCAACCAAGATTTCTCAACGCTGCAATAAGAGGTGTCA 339
Query 438 CTAAGCTTGGACCTCATGAACTATTGAGTGTTCTCAAGACTATTGAGAAAGACATGGGAC 497
| ||||| |||||||||||| |||| |||||||||| ||||||||||| ||||| |
Sbjct 340 CAAAGCTCAAACCTCATGAACTCTTGAACGTTCTCAAGAAAATTGAGAAAGAGATGGGTC 399
Query 498 GTG-AG--GATGGTATT-CGGTATGGACCAAGACCACTTGATTTGGACATATTGTTCTAC 553
||| || ||||| || |||||||||||||||||||||| |||||||||||||||||
Sbjct 400 GTGAAGAAAATGGT-TTAAGGTATGGACCAAGACCACTTGACTTGGACATATTGTTCTAT 458
Query 554 GGCAAG-ATGAGAATAAGTTCTGATAAGCTGATCATACCACATGAGAGACTCTGGGAGAG 612
|| ||| | || |||| ||||||||| || ||||| || ||||||||| ||||||| ||
Sbjct 459 GGAAAGCACAAG-ATAATTTCTGATAAACTTATCATTCCCCATGAGAGAATCTGGGAAAG 517
Query 613 GTCATTTGTGTTAGCACCTTTGGTTGATTTGCTTGGATC---AGCTGTTGATAATGAT-- 667
||||||| |||||||||||||| |||||||||||| | || | |||||||||||
Sbjct 518 ACCATTTGTTTTAGCACCTTTGGTAGATTTGCTTGGAACGGAAGATATTGATAATGATAA 577
Query 668 -ACAGTTGC-TCATTGGCATTCGCTCGCGATACATCCTGGTGGAATTTTCCAAGCGTGGG 725
| |||||| | |||||||||| ||| | || ||| | ||||||||||||||||||||||
Sbjct 578 AATAGTTGCAT-ATTGGCATTCACTCTCAATGCATTCAGGTGGAATTTTCCAAGCGTGGG 636
Query 726 AGAGACTGGGTGGCGAATCACTGATTGGACAAGATGG---TATACAAAGGGTTTTACCAA 782
|| | | ||||| || ||| || ||||| |||| || ||||||||||||| ||||||
Sbjct 637 AGCGGTTAGGTGGTGAGTCATTGCTTGGAAAAGACGGTATTATACAAAGGGTTATACCAA 696
Query 783 TAGGAGATAAGCTGTGGGATTTTTCTAACAAAACTCATGTAATGGGTATACTTAATCTTA 842
|||||||| | | |||||||||||||| |||||| |||| |||||||||||||||||||
Sbjct 697 TAGGAGATCATTTATGGGATTTTTCTAAGAAAACTTATGTGATGGGTATACTTAATCTTA 756
Query 843 CTCCCGACAGCTTTAGCGATGGAGGGCAA-TTTCAATCAATAGATTCTGCAGTTTCTCGG 901
|||| || |||||||| |||||| || || |||||||| ||||| | || |||||||||
Sbjct 757 CTCCTGATAGCTTTAGTGATGGA-GGTAAGTTTCAATCGGTAGATACCGCGGTTTCTCGG 815
Query 902 GTTCGCTCAATGATCTCTGATGGTGCAGATATAATTGATATTGGAGCACAGTCCACACGC 961
|| || || ||||| ||||| |||| |||||| |||||||| || |||||||| |||||
Sbjct 816 GTCCGGTCTATGATATCTGAAGGTGTAGATATTATTGATATCGGTGCACAGTCAACACGG 875
Query 962 CCAATGGCCTCAAGAATTTCTAGTCAAGAAGAGTTAGATAGACT-ACTACCAGTTTTAGA 1020
|| |||||||||||||| ||||||||||||||| |||||||||| | | || |||||| |
Sbjct 876 CCGATGGCCTCAAGAATATCTAGTCAAGAAGAGATAGATAGACTGA-TTCCGGTTTTAAA 934
Query 1021 GGCTGTTCGTGGTATGCCAGAGATGGAGGAAAAGCTCATATCCGTGGACACTTTCAACTC 1080
| |||||| |||||| |||||||| ||| |||||||||||| ||||||||||| |||||
Sbjct 935 AGTTGTTCGCGGTATGGCAGAGATGAAGGGAAAGCTCATATCAGTGGACACTTTTAACTC 994
Query 1081 TGAGGTTGCTTCAGAAGCAATAAGCAATGGAGCTGACATTCTAAATGATGTATCTGCG-G 1139
||||||||||| |||||||||||| ||||||||||||||| | ||||||||||| | | |
Sbjct 995 TGAGGTTGCTTTAGAAGCAATAAGAAATGGAGCTGACATTTTGAATGATGTATCCG-GAG 1053
Query 1140 GAACCTTAGACCCGAATATGCATGAGGTTGTTGCAGAATCTGGGGTTCCTTACATGGCCA 1199
||| |||||| ||| |||||| |||||||||| || |||| |||||||| ||| ||
Sbjct 1054 GAAGTTTAGACGAGAACATGCATAAGGTTGTTGCGGATTCTGATGTTCCTTATATGATCA 1113
Query 1200 TGCACATGAGAGGAGATCCATGTACAATGCAGAACAAAGAGAATTTGCAGTACGATGATA 1259
||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |
Sbjct 1114 TGCACATGAGAGGAGATCCATGTACAATGCAAAACAAAGAGAATTTGGAGTATAATGAAA 1173
Query 1260 TCTGCAAGGATGTTGCTTCTGAACTCTACTT-GAGAGTGAGAGATGCGGAACTCTCTGGG 1318
| ||||| |||||||| | || || || | |||||| ||||| || ||||||||||||
Sbjct 1174 TATGCAAAGATGTTGCCACAGAGCTTTA-TGAGAGAGTAAGAGAAGCAGAACTCTCTGGG 1232
Query 1319 ATTCCAGCTTGGAGGGTTATGATCGATCCAGGGATTGGGTTTTCCAAG--AATGTAGATC 1376
||||||||||||||| ||||||| |||||||| ||||| ||||| ||| ||| |||||
Sbjct 1233 ATTCCAGCTTGGAGGATTATGATTGATCCAGGAATTGGATTTTCTAAGGGAAT--AGATC 1290
Query 1377 ATAATCTAGATATTATTATGGATCTGCCAAAAATCCGAGAAGAGATGGCTAAGA-GAAGT 1435
||||| |||||||| | ||||| || ||||||||| | |||||||||||||||| || ||
Sbjct 1291 ATAATTTAGATATTGTCATGGAGCTACCAAAAATCAGGGAAGAGATGGCTAAGAAGA-GT 1349
Query 1436 ATAGCAGTGTCTCATGCGCCTATACTCATAGGACCTTCAAGGAAGAGGTTTCTGGGAGAT 1495
|||| | |||||||||| |||||||| |||||||||||||||||||| ||| ||||||||
Sbjct 1350 ATAGGATTGTCTCATGCACCTATACTTATAGGACCTTCAAGGAAGAGATTTTTGGGAGAT 1409
Query 1496 ATTTGTGGGCGTCCTGAGGCCACTGACAGAGATGCTGCAACTGTTGCTTCAGTTACTGCA 1555
|||||||| ||||||||||| | ||| |||||||||||||||||||||| ||||||||
Sbjct 1410 ATTTGTGGTCGTCCTGAGGCAAGTGAAAGAGATGCTGCAACTGTTGCTTGTGTTACTGCT 1469
Query 1556 GGCATTTTAGGAGGTGCCAATATCATTAGAGTTCATGATGTTAGACATAACGCAGACGCA 1615
|| || || |||||| |||||||||||||||||| |||||||| |||| | ||||||
Sbjct 1470 GGGATACTAAAAGGTGCTAATATCATTAGAGTTCATAATGTTAGAGATAATGTAGACGCG 1529
Query 1616 GCTAAAT-TATGCGACGCAATGCTAAGAAGAAGAAGGT-CAAAA 1657
|| || ||||||| |||||| | || ||| ||||| |||||
Sbjct 1530 GC-AAGGCTATGCGATGCAATGAT--GACGAA-AAGGTTCAAAA 1569
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83182303065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5