BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945037
Length=1427
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family prot... 1879 0.0
AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family prot... 935 0.0
AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family prot... 617 7e-176
> AT4G29700.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14543457-14545138 REVERSE LENGTH=1682
Length=1682
Score = 1879 bits (1017), Expect = 0.0
Identities = 1295/1426 (91%), Gaps = 31/1426 (2%)
Strand=Plus/Plus
Query 16 TTTCCAATGG-TGAAAACCAAAAATGTTCA-GTCTCCCAAACTTTCTCTCA---TCCTTC 70
|||| ||||| | ||||||||||||||| | ||| |||||||||||||| ||||||
Sbjct 9 TTTCAAATGGCT-AAAACCAAAAATGTT-ATTTCTTTCAAACTTTCTCTCATCTTCCTTC 66
Query 71 TAAATATCTTCATCATAGCCACCATCGCAGTCGCA---GCC---AACGCCGGTACCAATG 124
| ||||| |||||| ||||||||||||||| |||| ||| |||||||||||||| |
Sbjct 67 TTAATATTTTCATCGTAGCCACCATCGCAGCCGCAGCGGCCGTTAACGCCGGTACCAAAG 126
Query 125 ATTT-GAGTTCTCGGTCATCCAAAACCAGGCGTCCCTGGCCCTTCAAGAAGCTCAACAAA 183
||| || ||||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 127 GTTTGGA-TTCTCGGCCGTCCAAAACCAGGCGTCCCTGGCCTTTCAAGAAGCTCAACAAA 185
Query 184 CCGGTGGTTTTAATGATTTCCTGCGACGGTTTCC-GTTTCGGTTACCAATTTAAAACCGA 242
||||||||||||||||| || ||||||||||||| |||| ||||||||||||||||| ||
Sbjct 186 CCGGTGGTTTTAATGATCTCTTGCGACGGTTTCCGGTTT-GGTTACCAATTTAAAACGGA 244
Query 243 CACACCAAATATCGACCTTCTCATATCCGGAGGAACCGAGGCCAAA-AGCGGTTTAATCC 301
||||||||| |||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct 245 CACACCAAACATCGACCTTCTCATATCCGGAGGAACTGAGGCCAAACA-CGGTTTAATCC 303
Query 302 CGGTTTTCCCCACCATGACGTTCCCAAACCACTACTCTATCGCCACCGGACTCTACCCGG 361
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 304 CGGTTTTCCCCACCATGACATTCCCAAACCACTACTCTATCGCAACCGGACTCTACCCGG 363
Query 362 CTTACCACGGTATAATCATGAACACGTTTACCGATCCGGTTACTGGAGATGTGTTCAACA 421
|||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct 364 CTTACCACGGTATAATCATGAACAAGTTTACCGATCCGGTTACGGGAGAGGTGTTCAACA 423
Query 422 AAGGCTTACAACCAAAATGGTGGTTAGGTGAGCCAATGTGGGTAACCGCAGTAAACCAAG 481
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 424 AAGGCTTACAACCAAAATGGTGGTTAGGTGAGCCGCTGTGGGTAACCGCAGTAAACCAAG 483
Query 482 GTCTCAAGGCTGTGACTTACTTTTGGCCAGGCTCTGAAGTTCCCAAAGGTTCTTGGACTT 541
|||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 484 GTCTCAAGGCTGTGACCTACTTTTGGCCAGGCTCTGAAGTTCTAAAAAGTTCTTGGACTT 543
Query 542 GCCCTAAAGGATACTGTCCACGTTTCAATAATTCGGTTCCTTTAGAAGAAAGGGTCGATT 601
||||| ||||||| ||||||| ||||||| ||| |||||||||||||||||||| ||||
Sbjct 544 GCCCTGAAGGATATTGTCCACATTTCAATCTTTCAGTTCCTTTAGAAGAAAGGGTTGATT 603
Query 602 CGGTCTTGAGCCATTTCGATCAGCC-TGAGGACGAAATTCCTGATTTGCTGATGTTATAT 660
|||||||||||||||| ||||| || |||||||||| |||||||||| |||||||| |||
Sbjct 604 CGGTCTTGAGCCATTTTGATCA-CCTTGAGGACGAAGTTCCTGATTTACTGATGTTGTAT 662
Query 661 TTCAATGAGCCGGACAAAGCAGGTCATAAATATGGTCCTGACGATCCTCGGCTTACAAAT 720
||| ||||||| ||| || | |||||||| ||||||||||| ||||||||| |||| | |
Sbjct 663 TTCGATGAGCCAGACCAATCGGGTCATAACTATGGTCCTGATGATCCTCGGGTTACGACT 722
Query 721 GCGGTTTCGAGGATTGATAAAATGATTGGTAGGGTGATAAAGGGGCTTAAGAAGAGAGAG 780
|| ||||| ||| |||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 723 GCTGTTTCTAGGGTTGATAAAATGATTGGTAGGGTGATAAAGGGGCTGAAGCAGAGGGAG 782
Query 781 ATCTTTGATGAGGTGCATGTGATACTGCTTGGTGATCACGGAATGGTGACCAACTGTGAA 840
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 783 ATCTTTGATGAGGTTCATGTGATATTGCTTGGTGATCACGGAATGGTGACCAACTGTGAG 842
Query 841 TGTAACGAGAAAGCGATTTATATTGATGACTTGGCGGATTGGATCAAGATACCTGCGGCT 900
|||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 843 TGTAACGAGAAAGCGATTTACATTGATGACTTAGCGGATTGGATCAAGATACCCGCGGCT 902
Query 901 TGGATCCAAGCTTACAGCCCAGTGCTAGCAATTAATCCACAATGGGGCAAAAATGTCGAG 960
|||||||| ||||||||||||||||||||||| ||||| || ||||| ||| ||||||||
Sbjct 903 TGGATCCAGGCTTACAGCCCAGTGCTAGCAATCAATCCTCAGTGGGGGAAAGATGTCGAG 962
Query 961 AATCAAAGCGAAAAGAACGCCAAAGTCGTGGCAAAGATGAACGAAGCTTTGAGCTCAGGG 1020
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 963 AATCAAAGCGAAAAGAACGCGGAAGTCGTGGCGAAGATGAACGAAGCTTTGAGCTCAGGG 1022
Query 1021 GAAGTAAAAAACGGAGA-TTTATTGAAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACT 1079
|||||||||||||||| ||| ||||| |||||||||||||||||| |||| || |||||
Sbjct 1023 AAAGTAAAAAACGGAGAGTTT-TTGAAAGTTTACTTGAAGGAGAAGCTACCAGAGAGACT 1081
Query 1080 GCATTATTCCGAGAGCTATCGGATTCCACCAATCATAGGAATAGTCGGAGAAGGTCTAAT 1139
||||| ||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1082 GCATTTTTCAGAGAGTTATCGGATTCCACCGATCATAGGAATTGTCGGAGAAGGTCTAAT 1141
Query 1140 GGTCAGACAGAATAGAACAAATTCTCAAAAATGCTACGGAGACCATGGTT-TCGACAACA 1198
|||||||||||| ||||||||| ||||| ||||| ||||||||||||| | ||||||
Sbjct 1142 GGTCAGACAGAACAGAACAAATGCTCAAGTTTGCTATGGAGACCATGGTTAT-GACAACG 1200
Query 1199 AGTTCTTCTCAATGAGGACTATTTTTGTCGGACATGGTTCTAGGTTTAGGAGAGGAAAGA 1258
|| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1201 AGCTCTTCTCGATGAGGACTATTTTTGTCGGACATGGTTCTAGGTTTAGTAGAGGAAAAA 1260
Query 1259 AAGTGCCATCGTTTGAGAATGTGGAGATCTATAGCGTCGTTGCAGATATTCTTGGACTCC 1318
|||||||||| || ||||||||| ||||||||| |||||||||||| ||||||||||||
Sbjct 1261 AAGTGCCATCATTCGAGAATGTGCAGATCTATAACGTCGTTGCAGAGCTTCTTGGACTCC 1320
Query 1319 GACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTCGGAGCATTCTCTTGCCTTCCGGAG 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1321 GACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTCGGAGCATTCTCTTGCCTTCTGGAG 1380
Query 1379 CAACAAGGGAAATAGAATATGAAGTCTAAATATC-CTTAGCTCATG 1423
||||||||||| || || ||||||| ||| ||| |||||||||||
Sbjct 1381 CAACAAGGGAAGTA-AA-ATGAAGT--AAA-ATCACTTAGCTCATG 1421
> AT4G29690.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14540907-14542481 REVERSE LENGTH=1575
Length=1575
Score = 935 bits (506), Expect = 0.0
Identities = 1014/1250 (81%), Gaps = 71/1250 (6%)
Strand=Plus/Plus
Query 168 CAAGAAGCTCAACAAACCGGTGGTTTTAATGATTTCCTGCGACGGTTTCCGTTTCGGTTA 227
||||||||||||||||||||||||| | | ||||||||||| |||||||| ||||||||
Sbjct 171 CAAGAAGCTCAACAAACCGGTGGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTA 230
Query 228 CCAATTTAAAACCGACACACCAAATATCGACCTTCTCATATCCGGAGGAACCGAGGCCAA 287
|||||| || || || |||||||| ||||| || ||||||||| |||| ||||| || ||
Sbjct 231 CCAATTCAAGACAGAGACACCAAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAA 290
Query 288 AAGCGGTTTAATCCCGGTTTTCCCCACCATGACGTTCCCAAACCACTACTCTATCGCCAC 347
| ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct 291 GACCGGTTTAATTCCGGTTTTCCCCACCATGACGTTCCCAAACCATTACTCAATCGCTAC 350
Query 348 CGGACTCTACCCGGCTTACCACGGTATAATCATGAACACGTTTACCGATCCGGTTACTGG 407
||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| | |||
Sbjct 351 CGGACTCTATCCGGCTTCCCACGGCATAATCATGAACAAATTTACCGATCCGGTAAGTGG 410
Query 408 AGATGTGTTCAACA--AAGGCTTACAACCA-AAATGGTGGTTAGGTGAGCCAATGTGGGT 464
|| | ||||||| || || | |||| |||||||||||||||||||| |||||||
Sbjct 411 GGAACTATTCAACAGGAAC-CT-A-AACCCTAAATGGTGGTTAGGTGAGCCGTTGTGGGT 467
Query 465 AACCGCAGTAAACCAAGGTCTCAAGGCTGTGACTTACTTTTGGCCAGGCTCTGAAGTTCC 524
|||||||| |||||||| |||| ||||| ||||||||||||||||||| |||| || ||
Sbjct 468 GACCGCAGTGAACCAAGGGCTCATGGCTGCGACTTACTTTTGGCCAGGCGCTGACGT-CC 526
Query 525 -CAAAGGTTCTTGGA-CTTGCCCTAAAGGATACTGTCCA-CGT--TT-CAATAATTCGGT 578
|||||| ||||||| || |||| ||||| | ||| | | | || |||| ||| ||
Sbjct 527 ACAAAGGGTCTTGGAACT-GCCCAAAAGGCTTTTGTAAAGC-TCCTTACAATGTTTCAGT 584
Query 579 TCCTTTAGAAGAAAGGGTCGATTCGGTCTTGAGCCATTTCGATCAGCCTGAG-GACGAAA 637
||||||||||||||| |||||| || |||||| | ||||||||| || ||| || ||||
Sbjct 585 TCCTTTAGAAGAAAGAGTCGATACGATCTTGAACTATTTCGATCTTCCAGAGAGA-GAAA 643
Query 638 TTCCTGATTTGC-TGA-TGTTATATTTCAATGAGCCGGACAAAGCA-GGTCATAAATATG 694
| |||||||| | || | | |||||| |||| ||||||| | || || ||| | || |
Sbjct 644 TCCCTGATTT-CATGGCTCTG-TATTTCGATGAACCGGACATA-CAAGGCCATGAGTACG 700
Query 695 GTCCTGACGATCCTCGGCTT-ACA-AATGCGGTTTCGA-GGATTGATAAAATGATTGGTA 751
| ||||| |||||||| | | || || || || || | || | ||||||||||| ||||
Sbjct 701 GCCCTGATGATCCTCG-CGTCACGGAA-GCCGTCTCAAAGG-TCGATAAAATGATCGGTA 757
Query 752 GGGTGATAAAGGGGCTTA-AGAAGAGAGA-GATCTTT-GATGAGGTGCATGTGATACTGC 808
|| | || | ||| || ||||||| || | | ||| | ||| || ||||||||| |||
Sbjct 758 GGATCATCATGGGA-TTGGAGAAGAG-GAAGGTTTTTAG-TGATGTTCATGTGATATTGC 814
Query 809 TTGGTGATCACGGAATGGTGACCAACTGTGAATGTAACGAGAAAGCGATTTATATTGATG 868
||||||||||||||||||| || |||||||| || || || | |||||| |||||||
Sbjct 815 TTGGTGATCACGGAATGGTTACTAACTGTGAC---AA-GA-AA-GTGATTTACATTGATG 868
Query 869 ACTTGGCGGATTGGATCAAGATACCTGCGGCTTGGATCCAAGCTTACAGCCCAGTGCTAG 928
| || || ||||||||||||||||| |||| ||||||||||| ||| || || |||||||
Sbjct 869 ATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAAGATTATAGTCCGGTGCTAG 928
Query 929 CAATTAATCCACAATGGGGCAAAAATGTCGAGAATCAAAGCGA-A-AAGAACGCCA-AAG 985
| || ||||| | ||||||||| ||||| |||||| | | || | ||||| || | ||
Sbjct 929 CGATGAATCCGCGCTGGGGCAAAGATGTCAAGAATCCA-G-GACAGAAGAATGC-AGAAC 985
Query 986 TCGT--GGCAAAGATGAACGAAGCTTTGAGCTCAGGGGAAGTAAAAAACGGAGA-TTTAT 1042
|||| || || ||||||||||||||||||||||||| ||||| |||||||| ||| |
Sbjct 986 TCGTAAGG-AA-GATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTT-T 1042
Query 1043 TGAAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGCTATCGGA 1102
|| ||||||||||||||||||| |||||| |||| |||||||||||||| || | |||||
Sbjct 1043 TGCAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATTCCGATAGTTCTCGGA 1102
Query 1103 TTCCACCAATCATAGGAATAGTCGGAGAAGGTCTAATGGTCAGACAGAATAGAACAAAT- 1161
||||||| ||||| ||||| || ||||||||||||||||| | |||||| |||||| |
Sbjct 1103 TTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACATACG 1162
Query 1162 TCTCAAAAATGCTAC-GGAGAC-CATGGTTTCGACAACAAGTTCTTCTCAATGAGGA-CT 1218
| |||| |||| | | ||| || ||||| | ||| || | |||||| || ||||| | |
Sbjct 1163 T-TCAAGAATGTT-CTGGA-ACTCATGGATACGATAATATGTTCTTTTCTATGAG-ATCA 1218
Query 1219 ATTTTTGTCGGACATGGTTCTAGGTTTAGGAGAGGAA-AGAAAGTGCCATCGTTTGAGAA 1277
|| ||||| ||| ||||| | |||||||||||||||| | |||||||||||||| |||||
Sbjct 1219 ATCTTTGTTGGATATGGTCCAAGGTTTAGGAGAGGAATA-AAAGTGCCATCGTTCGAGAA 1277
Query 1278 TGTGGAGATCTATA--GCGTCGTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAAT 1335
||| || |||||| || | |||||||| ||||| |||||||||||||||||||||||
Sbjct 1278 TGTTCAGGTCTATAATGC-T-GTTGCAGAGATTCTCGGACTCCGACCAGCTCCGAACAAC 1335
Query 1336 GGTTCTTCTTTGTTCCCTCGGAG-CATTCTCTTGCC-TTCCGGAGCAACA 1383
|||||||||||||| |||| || | |||||||||| || |||| ||||
Sbjct 1336 GGTTCTTCTTTGTTTACTCGTAGTC-TTCTCTTGCCATTT-GGAGAAACA 1383
> AT4G29710.1 | Symbols: | Alkaline-phosphatase-like family protein
| chr4:14547001-14547402 REVERSE LENGTH=402
Length=402
Score = 617 bits (334), Expect = 7e-176
Identities = 374/393 (95%), Gaps = 4/393 (1%)
Strand=Plus/Plus
Query 997 ATGAACGAAGCTTTGAGCTCAGGGGAAGTAAAAAACGGAGA-TTTATTGAAGGTTTACTT 1055
|||||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct 1 ATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTT-TTGACTGTTTACTT 59
Query 1056 GAAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGCTATCGGATTCCACCAATCAT 1115
|||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||
Sbjct 60 GAAGGAGAAGTTACCGGACAGACTGCATTATTCCCAGAGTTATCGGATTCCACCAATCAT 119
Query 1116 AGGAATAGTCGGAGAAGGTCTAATGGTCAGACAGAATAGAACAAATTCTCAAAAATGCTA 1175
|||||| ||||||||||||||||| |||||||| |||||||| ||| ||||| |||||||
Sbjct 120 AGGAATGGTCGGAGAAGGTCTAATTGTCAGACAAAATAGAACTAATGCTCAAGAATGCTA 179
Query 1176 CGGAGACCATGGTT-TCGACAACAAGTTCTTCTCAATGAGGACTATTTTTGTCGGACATG 1234
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CGGAGACCATGGTTAT-GACAACAAGTTCTTCTCAATGAGGACTATTTTTGTCGGACATG 238
Query 1235 GTTCTAGGTTTAGGAGAGGAAAGAAAGTGCCATCGTTTGAGAATGTGGAGATCTATAGCG 1294
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 239 GTTCTAGGTTTAGGAGAGGAAAGAAAGTGCCATCGTTTGAGAATGTGCAGATCTATAGCG 298
Query 1295 TCGTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTC 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TCGTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAATGGTTCTTCTTTGTTCCCTC 358
Query 1355 GGAGCATTCTCTTGCCTTCCGGAGCAACAAGGG 1387
|||||||||||||||||| | ||||||||||||
Sbjct 359 GGAGCATTCTCTTGCCTTTCAGAGCAACAAGGG 391
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70330963545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5